RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
HDAC4-212ENST00000495497 MALP21145 153 aa12.61□□□□□ -0.39
HDAC4-212ENST00000495497 COX6A2Q02221 97 aa12.61□□□□□ -0.39
HDAC4-212ENST00000495497 LINC00242Q5T6M2 205 aa12.61□□□□□ -0.39
HDAC4-212ENST00000495497 LINC00526Q96FQ7 95 aa12.61□□□□□ -0.39
HDAC4-212ENST00000495497 C2orf88Q9BSF0 95 aa12.61□□□□□ -0.39
HDAC4-212ENST00000495497 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
HDAC4-212ENST00000495497 GVQW2A0A096LPI5 108 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-212ENST00000495497 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
HDAC4-212ENST00000495497 BAGE3Q86Y29 109 aa12.59□□□□□ -0.39
HDAC4-212ENST00000495497 FAM30AQ9NZY2 134 aa12.59□□□□□ -0.39
HDAC4-212ENST00000495497 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
HDAC4-212ENST00000495497 HBDP02042 147 aa12.58□□□□□ -0.4
HDAC4-212ENST00000495497 CNBPP62633 177 aaKnown RBP12.58□□□□□ -0.4
HDAC4-212ENST00000495497 PAPPA-AS1Q5QFB9 102 aa12.58□□□□□ -0.4
HDAC4-212ENST00000495497 HAMPP81172 84 aa12.57□□□□□ -0.4
HDAC4-212ENST00000495497 PDZD11Q5EBL8 140 aa12.57□□□□□ -0.4
HDAC4-212ENST00000495497 CHCHD1Q96BP2 118 aaKnown RBP12.57□□□□□ -0.4
HDAC4-212ENST00000495497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-212ENST00000495497 CDK2AP2O75956 126 aa12.56□□□□□ -0.4
HDAC4-212ENST00000495497 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
HDAC4-212ENST00000495497 A0A0J9YXV3 536 aa12.55□□□□□ -0.4
HDAC4-212ENST00000495497 S100A1P23297 94 aa12.55□□□□□ -0.4
HDAC4-212ENST00000495497 XGP55808 180 aa12.55□□□□□ -0.4
HDAC4-212ENST00000495497 IGLV4-69A0A075B6H9 119 aa12.54□□□□□ -0.4
HDAC4-212ENST00000495497 ZNF561-AS1K7EIQ3 104 aa12.54□□□□□ -0.4
HDAC4-212ENST00000495497 LINC00310P59036 64 aa12.54□□□□□ -0.4
HDAC4-212ENST00000495497 FAM19A3Q7Z5A8 133 aa12.54□□□□□ -0.4
HDAC4-212ENST00000495497 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
HDAC4-212ENST00000495497 CST9LQ9H4G1 147 aa12.54□□□□□ -0.4
HDAC4-212ENST00000495497 A0A087WZ39 114 aa12.53□□□□□ -0.4
HDAC4-212ENST00000495497 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.53□□□□□ -0.4
HDAC4-212ENST00000495497 SERF1AO75920 110 aa12.53□□□□□ -0.4
HDAC4-212ENST00000495497 APOMO95445 188 aa12.53□□□□□ -0.4
HDAC4-212ENST00000495497 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.41
HDAC4-212ENST00000495497 NUPR1O60356 82 aa12.52□□□□□ -0.41
HDAC4-212ENST00000495497 NDUFA6P56556 154 aa12.52□□□□□ -0.41
HDAC4-212ENST00000495497 PMVKQ15126 192 aa12.52□□□□□ -0.41
HDAC4-212ENST00000495497 ORAOV1Q8WV07 137 aa12.52□□□□□ -0.41
HDAC4-212ENST00000495497 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.41
HDAC4-212ENST00000495497 HSBP1O75506 76 aa12.51□□□□□ -0.41
HDAC4-212ENST00000495497 SPAG11BQ08648 103 aa12.51□□□□□ -0.41
HDAC4-212ENST00000495497 HERVK_113P63121 156 aa12.5□□□□□ -0.41
HDAC4-212ENST00000495497 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
HDAC4-212ENST00000495497 Q6ZSA8 131 aa12.5□□□□□ -0.41
HDAC4-212ENST00000495497 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
HDAC4-212ENST00000495497 CDKN2A-AS1Q9UH64 79 aa12.5□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BKO60814 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 ATP5LO75964 103 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BJP06899 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BOP23527 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BBP33778 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BDP58876 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BCP62807 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 SYCNQ0VAF6 134 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST2H2BEQ16778 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-212ENST00000495497 OR10D4PQ8NGN7 298 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BHQ93079 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BNQ99877 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 HIST1H2BMQ99879 126 aa12.49□□□□□ -0.41
HDAC4-212ENST00000495497 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
HDAC4-212ENST00000495497 SEC11AP67812 179 aa12.48□□□□□ -0.41
HDAC4-212ENST00000495497 Q6ZRU5 148 aa12.48□□□□□ -0.41
HDAC4-212ENST00000495497 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
HDAC4-212ENST00000495497 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
HDAC4-212ENST00000495497 PANO1I0J062 215 aa12.47□□□□□ -0.41
HDAC4-212ENST00000495497 LINC00469Q8N7U9 141 aa12.47□□□□□ -0.41
HDAC4-212ENST00000495497 LINC01561Q8N1V8 128 aa12.46□□□□□ -0.41
HDAC4-212ENST00000495497 C2orf48Q96LS8 159 aa12.46□□□□□ -0.41
HDAC4-212ENST00000495497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-212ENST00000495497 KIAA0087Q14695 138 aa12.45□□□□□ -0.42
HDAC4-212ENST00000495497 IFI27L1Q96BM0 104 aa12.45□□□□□ -0.42
HDAC4-212ENST00000495497 FAT1Q14517 4588 aa12.44□□□□□ -0.42
HDAC4-212ENST00000495497 SMR3BP02814 79 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-212ENST00000495497 CHTF8P0CG12 524 aa12.44□□□□□ -0.42
HDAC4-212ENST00000495497 SCXQ7RTU7 201 aa12.44□□□□□ -0.42
HDAC4-212ENST00000495497 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
HDAC4-212ENST00000495497 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
HDAC4-212ENST00000495497 C10orf25Q5T742 122 aa12.43□□□□□ -0.42
HDAC4-212ENST00000495497 PACRGQ96M98 296 aaPredicted RBP12.43□□□□□ -0.42
HDAC4-212ENST00000495497 CHAC1Q9BUX1 264 aa12.43□□□□□ -0.42
HDAC4-212ENST00000495497 TOMM7Q9P0U1 55 aa12.43□□□□□ -0.42
HDAC4-212ENST00000495497 UNQ6190/PRO20217Q6UXQ8 127 aa12.42□□□□□ -0.42
HDAC4-212ENST00000495497 SMIM1B2RUZ4 78 aa12.41□□□□□ -0.42
HDAC4-212ENST00000495497 LEPROTL1O95214 131 aa12.41□□□□□ -0.42
HDAC4-212ENST00000495497 SPINK8P0C7L1 97 aa12.41□□□□□ -0.42
HDAC4-212ENST00000495497 FABP4P15090 132 aa12.41□□□□□ -0.42
HDAC4-212ENST00000495497 C2orf82Q6UX34 121 aa12.41□□□□□ -0.42
HDAC4-212ENST00000495497 CIRBP-AS1Q8TBR5 109 aa12.41□□□□□ -0.42
HDAC4-212ENST00000495497 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
HDAC4-212ENST00000495497 IGKV2-24A0A0C4DH68 120 aa12.4□□□□□ -0.42
HDAC4-212ENST00000495497 NDUFA1O15239 70 aa12.4□□□□□ -0.42
HDAC4-212ENST00000495497 A0A096LNI7 61 aa12.39□□□□□ -0.43
HDAC4-212ENST00000495497 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
HDAC4-212ENST00000495497 H0Y8G0 127 aa12.39□□□□□ -0.43
HDAC4-212ENST00000495497 PRSS2P07478 247 aa12.39□□□□□ -0.43
HDAC4-212ENST00000495497 ZNF22P17026 224 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-212ENST00000495497 TRAV12-1A0A0B4J245 112 aa12.38□□□□□ -0.43
HDAC4-212ENST00000495497 F8WDY8 70 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms