RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 KLKP1Q107X0 134 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 DIAPH2-AS1Q14236 149 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 ASB16-AS1Q495Z4 193 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 SPRNQ5BIV9 151 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 GUSBP11Q6P575 273 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 MIR17HGQ75NE6 70 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 DAZ4Q86SG3 579 aaKnown RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 DYNAPQ8N1N2 210 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 LINC00311Q8N616 119 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 FAM216BQ8N7L0 139 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 KLF14Q8TD94 323 aaPredicted RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 FXYD5Q96DB9 178 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 COX14Q96I36 57 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 IGF2BP2-AS1Q96M15 143 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 LINC01587Q99440 93 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 TIMM17AQ99595 171 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 MRPL36Q9P0J6 103 aaKnown RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 LHFPL6Q9Y693 200 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 C5orf42Q9H799 3197 aa1.3□□□□□ -2.2
HMGN1-218ENST00000490032 ANKRD17O75179 2603 aaKnown RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 HEATR1Q9H583 2144 aaKnown RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 GOLGA4Q13439 2230 aaKnown RBP1.3□□□□□ -2.2
HMGN1-218ENST00000490032 APC2O95996 2303 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 ACACAQ13085 2346 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 SPTAN1Q13813 2472 aaKnown RBP1.29□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV41A0A0B4J266 112 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGKV1-9A0A0C4DH69 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 A0A0J9YY99 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 LST1O00453 97 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 BRI3O95415 125 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGKV1D-33P01593 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGKV1-33P01594 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGKV1-5P01602 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGLV3-1P01715 115 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGLV6-57P01721 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGHV1-69P01742 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGHV3-30P01768 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 PRM2P04554 102 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 IGHV3-30-5P0DP03 117 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 MIFP14174 115 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 RPS27P42677 84 aaKnown RBP1.29□□□□□ -2.2
HMGN1-218ENST00000490032 RPL28P46779 137 aaKnown RBP1.29□□□□□ -2.2
HMGN1-218ENST00000490032 INSL3P51460 131 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 MP68P56378 58 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 SNRPD3P62318 126 aaKnown RBP1.29□□□□□ -2.2
HMGN1-218ENST00000490032 Q1T7F1 81 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 ESRGQ1W209 222 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 PIGYQ3MUY2 71 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 LCA10Q71F78 164 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 SCXQ7RTU7 201 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 PHF5AQ7RTV0 110 aaKnown RBP1.29□□□□□ -2.2
HMGN1-218ENST00000490032 VN1R4Q7Z5H5 301 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 KTN1-AS1Q86SY8 53 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 C20orf197Q8N268 126 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 EXOC3-AS1Q8N2X6 119 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 MUC7Q8TAX7 377 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 ZC2HC1AQ96GY0 325 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 ODF3Q96PU9 254 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 RETNLBQ9BQ08 111 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 LINC00467Q9BRT7 94 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 PRR15LQ9BU68 103 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 TMEM14BQ9NUH8 114 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 WDFY4Q6ZS81 3184 aa1.29□□□□□ -2.2
HMGN1-218ENST00000490032 CEP192Q8TEP8 1941 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 F5P12259 2224 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 COL6A6A6NMZ7 2263 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 URB1O60287 2271 aaKnown RBP1.28□□□□□ -2.2
HMGN1-218ENST00000490032 PTPRQQ9UMZ3 2332 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 C2CD3Q4AC94 2353 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CREBBPQ92793 2442 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 DOPEY1Q5JWR5 2465 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 ABCA12Q86UK0 2595 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 TRAV23DV6A0A075B6W5 121 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 IGLV3-32A0A0A0MS00 114 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 C17orf98A8MV24 154 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 SMKR1H3BMG3 65 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 H3BPC8 53 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 C19orf84I3L1E1 186 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 I3L3M4 83 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 IGLV2-8P01709 118 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CRPP02741 224 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 ARMS2P0C7Q2 107 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CD28P10747 220 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CCL4P13236 92 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 ZNF22P17026 224 aaPredicted RBP1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CD70P32970 193 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 ELOF1P60002 83 aaKnown RBP1.28□□□□□ -2.2
HMGN1-218ENST00000490032 HAMPP81172 84 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 SDIM1Q6ZPB5 146 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 Q6ZQT7 251 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 WFDC11Q8NEX6 87 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CCL4L1Q8NHW4 92 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 DCANP1Q8TF63 244 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 TMEM263Q8WUH6 116 aaKnown RBP1.28□□□□□ -2.2
HMGN1-218ENST00000490032 FAM19A4Q96LR4 140 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 UBE2E2Q96LR5 201 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 CCL13Q99616 98 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 XAGE1AQ9HD64 81 aa1.28□□□□□ -2.2
HMGN1-218ENST00000490032 NDUFA4L2Q9NRX3 87 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms