RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 IGLV5-45A0A087WSX0 123 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 LINC00959A0A1B0GUT2 108 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 VPREB1P12018 145 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 SNRPEP62304 92 aaKnown RBP3.73□□□□□ -1.81
CDHR3-213ENST00000488386 CNBPP62633 177 aaKnown RBP3.73□□□□□ -1.81
CDHR3-213ENST00000488386 RIGQ13278 110 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 OR5A1Q8NGJ0 315 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 MRAP2Q96G30 205 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 NAT8BQ9UHF3 227 aa3.73□□□□□ -1.81
CDHR3-213ENST00000488386 DMBT1Q9UGM3 2413 aaPredicted RBP3.72□□□□□ -1.81
CDHR3-213ENST00000488386 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 A0A096LNI7 61 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 C7orf77A4D0Y5 90 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 PHOX2AO14813 284 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 FCER1GP30273 86 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 RPL39P62891 51 aaKnown RBP3.72□□□□□ -1.81
CDHR3-213ENST00000488386 PEA15Q15121 130 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 MAJINQ3KP22 176 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 FAM74A3Q4VXF1 159 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 Q6ZUT4 128 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 TMEM101Q96IK0 257 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 BTF3L4Q96K17 158 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 OPRPNQ99935 248 aaPredicted RBP3.72□□□□□ -1.81
CDHR3-213ENST00000488386 CDC42SE2Q9NRR3 84 aa3.72□□□□□ -1.81
CDHR3-213ENST00000488386 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.71□□□□□ -1.82
CDHR3-213ENST00000488386 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 TRBV27A0A0K0K1C4 114 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 SMIM27A0A1W2PRY6 76 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 D6R8Y8 96 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 H7C423 109 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 TCAPO15273 167 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 NPYP01303 97 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 ZNF25P17030 456 aaPredicted RBP3.71□□□□□ -1.82
CDHR3-213ENST00000488386 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
CDHR3-213ENST00000488386 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
CDHR3-213ENST00000488386 FAM104BQ5XKR9 115 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 C5orf38Q86SI9 138 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 ZNF664Q8N3J9 261 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 UBE2D4Q9Y2X8 147 aa3.71□□□□□ -1.82
CDHR3-213ENST00000488386 IGLV4-69A0A075B6H9 119 aa3.7□□□□□ -1.82
CDHR3-213ENST00000488386 GVQW2A0A096LPI5 108 aaPredicted RBP3.7□□□□□ -1.82
CDHR3-213ENST00000488386 CKS2P33552 79 aa3.7□□□□□ -1.82
CDHR3-213ENST00000488386 SS18Q15532 418 aa3.7□□□□□ -1.82
CDHR3-213ENST00000488386 MRPL52Q86TS9 123 aaKnown RBP3.7□□□□□ -1.82
CDHR3-213ENST00000488386 STPG4Q8N801 248 aa3.7□□□□□ -1.82
CDHR3-213ENST00000488386 FAM104AQ969W3 186 aa3.7□□□□□ -1.82
CDHR3-213ENST00000488386 IGHV1-58A0A0C4DH39 117 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 A0A0J9YXV3 536 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 A0A1B0GXF2 115 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 HBBP68871 147 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 GAGE2BQ13066 116 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 CLLU1Q5K131 121 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 CD164L2Q6UWJ8 174 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 Q6ZRU5 148 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 CARD19Q96LW7 228 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 KIR2DL4Q99706 377 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 SMIM2Q9BVW6 85 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 PLAC8Q9NZF1 115 aa3.69□□□□□ -1.82
CDHR3-213ENST00000488386 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
CDHR3-213ENST00000488386 RAB14P61106 215 aa3.68□□□□□ -1.82
CDHR3-213ENST00000488386 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
CDHR3-213ENST00000488386 PNRC1Q12796 327 aaPredicted RBP3.68□□□□□ -1.82
CDHR3-213ENST00000488386 UQCC3Q6UW78 93 aa3.68□□□□□ -1.82
CDHR3-213ENST00000488386 TRBV24-1A0A075B6N3 115 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 LINC00862A6NCI5 91 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 COX7A2LO14548 114 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 PPP1R2P9O14990 202 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 OXTP01178 125 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 GAGE2EQ4V326 116 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 GAGE2AQ6NT46 116 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 TMEM136Q6ZRR5 245 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 PRELID3AQ96N28 172 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 CAMK2N2Q96S95 79 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 C20orf78Q9BR46 151 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 GAGE2DQ9UEU5 116 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 TNXBP22105 4242 aa3.67□□□□□ -1.82
CDHR3-213ENST00000488386 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 A0A1B0GW15 77 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 C1orf196B1AJZ1 125 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 F8W036 122 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
CDHR3-213ENST00000488386 PPP1R17O96001 155 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 ADCYAP1P18509 176 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
CDHR3-213ENST00000488386 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
CDHR3-213ENST00000488386 SPAG11BQ08648 103 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 C7orf33Q8WU49 177 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 ORAOV1Q8WV07 137 aa3.66□□□□□ -1.82
CDHR3-213ENST00000488386 CSDC2Q9Y534 153 aaKnown RBP3.66□□□□□ -1.82
CDHR3-213ENST00000488386 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 S100A8P05109 93 aa3.65□□□□□ -1.83
CDHR3-213ENST00000488386 RPL32P62910 135 aaKnown RBP3.65□□□□□ -1.83
CDHR3-213ENST00000488386 IFITM2Q01629 132 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms