RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FHL2Q14192 279 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 COL5A1-AS1Q5SY13 56 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 C6orf223Q8N319 242 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 AMELXQ99217 191 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 HIGD1BQ9P298 99 aa6.45□□□□□ -1.38
TMEM39A-208ENST00000486159 NMUP48645 174 aa6.44□□□□□ -1.38
TMEM39A-208ENST00000486159 ESRGQ1W209 222 aa6.44□□□□□ -1.38
TMEM39A-208ENST00000486159 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
TMEM39A-208ENST00000486159 IGLV4-69A0A075B6H9 119 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 LINC00694P0DN24 101 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 SEC11AP67812 179 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 Q9H8V8 135 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
TMEM39A-208ENST00000486159 TRBV25-1A0A075B6N4 114 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 ZNF25P17030 456 aaPredicted RBP6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 CCL18P55774 89 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 HSD52Q0P140 79 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 GAGE1Q13065 139 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 GAGE4Q13068 117 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 GAGE5Q13069 117 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 TAL2Q16559 108 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 MAPKAPK5-AS1Q8N8E1 139 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 TMEM243Q9BU79 118 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 Q9UF83 564 aa6.42□□□□□ -1.38
TMEM39A-208ENST00000486159 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 IGKV2D-26A0A0A0MRZ7 120 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 TINCRA0A1B0GVN0 87 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 TIRAPP58753 221 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 C2orf91Q6ZV80 131 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 VSIG2Q96IQ7 327 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 CHAC1Q9BUX1 264 aa6.41□□□□□ -1.38
TMEM39A-208ENST00000486159 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
TMEM39A-208ENST00000486159 UBE2L6O14933 153 aa6.4□□□□□ -1.38
TMEM39A-208ENST00000486159 TMEM170BQ5T4T1 132 aa6.4□□□□□ -1.38
TMEM39A-208ENST00000486159 PLEKHB2Q96CS7 222 aa6.4□□□□□ -1.38
TMEM39A-208ENST00000486159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 A0A096LPF7 62 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 TRAV8-6A0A0B4J262 113 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 TMEM223A0PJW6 202 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 H3BRM9 83 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 LEPROTO15243 131 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 PAX4O43316 350 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 HINT1P49773 126 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 BATFQ16520 125 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 MPV17L2Q567V2 206 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 BVES-AS1Q5T3Y7 98 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 AMMECR1LQ6DCA0 310 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 NTM-AS1Q6ZSK4 140 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 OR5A1Q8NGJ0 315 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 ATP6V0E2Q8NHE4 81 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 OPRPNQ99935 248 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
TMEM39A-208ENST00000486159 FAT1Q14517 4588 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 A0A0J9YXV3 536 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 A6NDN8 102 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 GYPEP15421 78 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 ZNF22P17026 224 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 UBE2D1P51668 147 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 HERVK_113P63121 156 aa6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-208ENST00000486159 ZNF815PA8K554 130 aa6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 H3BNG1 76 aa6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 LGALS3P17931 250 aaKnown RBP6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 Q6ZUT4 128 aa6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 CDC42SE2Q9NRR3 84 aa6.37□□□□□ -1.39
TMEM39A-208ENST00000486159 LOC100131303A0A0U1RQF7 123 aa6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 A0A1B0GUV1 79 aa6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 J3QQQ9 107 aa6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 CCL25O15444 150 aa6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
TMEM39A-208ENST00000486159 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
TMEM39A-208ENST00000486159 A0A1B0GV90 55 aa6.35□□□□□ -1.39
TMEM39A-208ENST00000486159 XP32Q5T750 250 aa6.35□□□□□ -1.39
TMEM39A-208ENST00000486159 Q8N1X5 172 aa6.35□□□□□ -1.39
TMEM39A-208ENST00000486159 CHCHD5Q9BSY4 110 aa6.35□□□□□ -1.39
TMEM39A-208ENST00000486159 SCGB1D4Q6XE38 83 aa6.34□□□□□ -1.39
TMEM39A-208ENST00000486159 CEND1Q8N111 149 aa6.34□□□□□ -1.39
TMEM39A-208ENST00000486159 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.39
TMEM39A-208ENST00000486159 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
TMEM39A-208ENST00000486159 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 482.7 ms