RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
SCAF4-206ENST00000485790 A0A1W2PNN7 141 aa8.52□□□□□ -1.05
SCAF4-206ENST00000485790 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
SCAF4-206ENST00000485790 SPAG11BQ08648 103 aa8.52□□□□□ -1.05
SCAF4-206ENST00000485790 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
SCAF4-206ENST00000485790 HBBP68871 147 aa8.51□□□□□ -1.05
SCAF4-206ENST00000485790 Q6ZUT4 128 aa8.51□□□□□ -1.05
SCAF4-206ENST00000485790 OPRPNQ99935 248 aaPredicted RBP8.51□□□□□ -1.05
SCAF4-206ENST00000485790 NDUFA1O15239 70 aa8.5□□□□□ -1.05
SCAF4-206ENST00000485790 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
SCAF4-206ENST00000485790 ORAOV1Q8WV07 137 aa8.5□□□□□ -1.05
SCAF4-206ENST00000485790 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
SCAF4-206ENST00000485790 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
SCAF4-206ENST00000485790 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
SCAF4-206ENST00000485790 IFITM10A6NMD0 228 aa8.49□□□□□ -1.05
SCAF4-206ENST00000485790 D6R8Y8 96 aa8.49□□□□□ -1.05
SCAF4-206ENST00000485790 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
SCAF4-206ENST00000485790 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
SCAF4-206ENST00000485790 MRPL54Q6P161 138 aaKnown RBP8.49□□□□□ -1.05
SCAF4-206ENST00000485790 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
SCAF4-206ENST00000485790 TGIF2-C20orf24A0A0A6YYL0 155 aa8.48□□□□□ -1.05
SCAF4-206ENST00000485790 C9JQL5 133 aa8.48□□□□□ -1.05
SCAF4-206ENST00000485790 IFI27P40305 119 aaPredicted RBP8.48□□□□□ -1.05
SCAF4-206ENST00000485790 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
SCAF4-206ENST00000485790 ORMDL3Q8N138 153 aa8.48□□□□□ -1.05
SCAF4-206ENST00000485790 A0A087WZ39 114 aa8.47□□□□□ -1.05
SCAF4-206ENST00000485790 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
SCAF4-206ENST00000485790 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.06
SCAF4-206ENST00000485790 ATP5L2Q7Z4Y8 100 aa8.46□□□□□ -1.06
SCAF4-206ENST00000485790 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
SCAF4-206ENST00000485790 PYGO1Q9Y3Y4 419 aa8.46□□□□□ -1.06
SCAF4-206ENST00000485790 NPYP01303 97 aa8.45□□□□□ -1.06
SCAF4-206ENST00000485790 SRSF3P84103 164 aaKnown RBP8.45□□□□□ -1.06
SCAF4-206ENST00000485790 UNQ6190/PRO20217Q6UXQ8 127 aa8.45□□□□□ -1.06
SCAF4-206ENST00000485790 A0A1B0GXF2 115 aa8.44□□□□□ -1.06
SCAF4-206ENST00000485790 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
SCAF4-206ENST00000485790 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
SCAF4-206ENST00000485790 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 ODF1Q14990 250 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 GAGE2EQ4V326 116 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 Q6ZN92 141 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 FAM104AQ969W3 186 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-206ENST00000485790 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 VCX2Q9H322 139 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 GAGE2DQ9UEU5 116 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 RNF213Q63HN8 5207 aa8.43□□□□□ -1.06
SCAF4-206ENST00000485790 LOC389332A0A1B0GUA5 103 aa8.42□□□□□ -1.06
SCAF4-206ENST00000485790 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
SCAF4-206ENST00000485790 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
SCAF4-206ENST00000485790 TEX43Q6ZNM6 134 aa8.42□□□□□ -1.06
SCAF4-206ENST00000485790 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
SCAF4-206ENST00000485790 TNXBP22105 4242 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 MT-ND4LP03901 98 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 PRSS2P07478 247 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 G0S2P27469 103 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 LINC00242Q5T6M2 205 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 LINC01561Q8N1V8 128 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 LRP2P98164 4655 aa8.41□□□□□ -1.06
SCAF4-206ENST00000485790 CKS1BP61024 79 aa8.4□□□□□ -1.06
SCAF4-206ENST00000485790 UBE2BP63146 152 aa8.4□□□□□ -1.06
SCAF4-206ENST00000485790 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
SCAF4-206ENST00000485790 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.06
SCAF4-206ENST00000485790 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 K7EMI3 77 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 PNRC1Q12796 327 aaPredicted RBP8.39□□□□□ -1.07
SCAF4-206ENST00000485790 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 ORMDL2Q53FV1 153 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 C6orf226Q5I0X4 101 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 Q8N8P6 123 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
SCAF4-206ENST00000485790 A0A1B0GVG6 124 aa8.38□□□□□ -1.07
SCAF4-206ENST00000485790 H0Y9J4 135 aa8.38□□□□□ -1.07
SCAF4-206ENST00000485790 RAB14P61106 215 aa8.38□□□□□ -1.07
SCAF4-206ENST00000485790 NPSP0C0P6 89 aa8.37□□□□□ -1.07
SCAF4-206ENST00000485790 UBE2D1P51668 147 aa8.37□□□□□ -1.07
SCAF4-206ENST00000485790 SEC11AP67812 179 aa8.37□□□□□ -1.07
SCAF4-206ENST00000485790 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
SCAF4-206ENST00000485790 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
SCAF4-206ENST00000485790 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
SCAF4-206ENST00000485790 M0QXV9 152 aa8.36□□□□□ -1.07
SCAF4-206ENST00000485790 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
SCAF4-206ENST00000485790 PRR26Q8N8Z3 221 aa8.36□□□□□ -1.07
SCAF4-206ENST00000485790 TOMM7Q9P0U1 55 aa8.36□□□□□ -1.07
SCAF4-206ENST00000485790 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
SCAF4-206ENST00000485790 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
SCAF4-206ENST00000485790 NXT2Q9NPJ8 142 aaKnown RBP8.35□□□□□ -1.07
SCAF4-206ENST00000485790 HERVK_113P63121 156 aa8.34□□□□□ -1.07
SCAF4-206ENST00000485790 AMELXQ99217 191 aa8.34□□□□□ -1.07
SCAF4-206ENST00000485790 GEMIN7Q9H840 131 aaKnown RBP8.34□□□□□ -1.07
SCAF4-206ENST00000485790 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
SCAF4-206ENST00000485790 IGIPA6NJ69 53 aa8.32□□□□□ -1.08
SCAF4-206ENST00000485790 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms