RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
VARS-225ENST00000482996 CSDC2Q9Y534 153 aaKnown RBP8.94□□□□□ -0.98
VARS-225ENST00000482996 HSBP1O75506 76 aa8.93□□□□□ -0.98
VARS-225ENST00000482996 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
VARS-225ENST00000482996 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
VARS-225ENST00000482996 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
VARS-225ENST00000482996 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
VARS-225ENST00000482996 SLPIP03973 132 aa8.92□□□□□ -0.98
VARS-225ENST00000482996 CD164L2Q6UWJ8 174 aa8.92□□□□□ -0.98
VARS-225ENST00000482996 TIMM21Q9BVV7 248 aa8.92□□□□□ -0.98
VARS-225ENST00000482996 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
VARS-225ENST00000482996 MYCBP2O75592 4640 aa8.92□□□□□ -0.98
VARS-225ENST00000482996 IGHV1-58A0A0C4DH39 117 aa8.91□□□□□ -0.98
VARS-225ENST00000482996 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
VARS-225ENST00000482996 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
VARS-225ENST00000482996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
VARS-225ENST00000482996 SNRPEP62304 92 aaKnown RBP8.9□□□□□ -0.98
VARS-225ENST00000482996 SERF1AO75920 110 aa8.89□□□□□ -0.99
VARS-225ENST00000482996 LINC00614P0C842 121 aa8.89□□□□□ -0.99
VARS-225ENST00000482996 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
VARS-225ENST00000482996 COA6Q5JTJ3 125 aaKnown RBP8.89□□□□□ -0.99
VARS-225ENST00000482996 Q6ZUT4 128 aa8.89□□□□□ -0.99
VARS-225ENST00000482996 Q8N8P6 123 aa8.89□□□□□ -0.99
VARS-225ENST00000482996 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 PANO1I0J062 215 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 MALP21145 153 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 G0S2P27469 103 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
VARS-225ENST00000482996 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
VARS-225ENST00000482996 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
VARS-225ENST00000482996 PDZD11Q5EBL8 140 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 SPANXA1Q9NS26 97 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
VARS-225ENST00000482996 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
VARS-225ENST00000482996 K7EMI3 77 aa8.87□□□□□ -0.99
VARS-225ENST00000482996 COX7A2LO14548 114 aa8.87□□□□□ -0.99
VARS-225ENST00000482996 RPL37AP61513 92 aaKnown RBP8.87□□□□□ -0.99
VARS-225ENST00000482996 COX6A2Q02221 97 aa8.87□□□□□ -0.99
VARS-225ENST00000482996 ORMDL2Q53FV1 153 aa8.87□□□□□ -0.99
VARS-225ENST00000482996 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
VARS-225ENST00000482996 PRSS47A8MTI9 375 aa8.86□□□□□ -0.99
VARS-225ENST00000482996 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
VARS-225ENST00000482996 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
VARS-225ENST00000482996 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
VARS-225ENST00000482996 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
VARS-225ENST00000482996 A0A087WYN8 130 aa8.84□□□□□ -0.99
VARS-225ENST00000482996 APOMO95445 188 aa8.84□□□□□ -0.99
VARS-225ENST00000482996 HBDP02042 147 aa8.84□□□□□ -0.99
VARS-225ENST00000482996 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
VARS-225ENST00000482996 HIST3H2BBQ8N257 126 aa8.84□□□□□ -0.99
VARS-225ENST00000482996 LINC00526Q96FQ7 95 aa8.84□□□□□ -0.99
VARS-225ENST00000482996 IGKV2-24A0A0C4DH68 120 aa8.83□□□□□ -1
VARS-225ENST00000482996 LINC01549A6NIU2 74 aa8.83□□□□□ -1
VARS-225ENST00000482996 IFITM10A6NMD0 228 aa8.83□□□□□ -1
VARS-225ENST00000482996 J3QL48 77 aa8.83□□□□□ -1
VARS-225ENST00000482996 FABP4P15090 132 aa8.83□□□□□ -1
VARS-225ENST00000482996 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
VARS-225ENST00000482996 MAJINQ3KP22 176 aa8.83□□□□□ -1
VARS-225ENST00000482996 C5orf38Q86SI9 138 aa8.83□□□□□ -1
VARS-225ENST00000482996 AKR1D1P51857 326 aa8.82□□□□□ -1
VARS-225ENST00000482996 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
VARS-225ENST00000482996 OPRPNQ99935 248 aaPredicted RBP8.82□□□□□ -1
VARS-225ENST00000482996 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
VARS-225ENST00000482996 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
VARS-225ENST00000482996 HSPB8Q9UJY1 196 aa8.82□□□□□ -1
VARS-225ENST00000482996 PYGO1Q9Y3Y4 419 aa8.82□□□□□ -1
VARS-225ENST00000482996 IGLV4-69A0A075B6H9 119 aa8.81□□□□□ -1
VARS-225ENST00000482996 LEPROTL1O95214 131 aa8.81□□□□□ -1
VARS-225ENST00000482996 LINC00310P59036 64 aa8.81□□□□□ -1
VARS-225ENST00000482996 PMCHL1Q16048 86 aa8.81□□□□□ -1
VARS-225ENST00000482996 FAM104AQ969W3 186 aa8.81□□□□□ -1
VARS-225ENST00000482996 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
VARS-225ENST00000482996 C7orf33Q8WU49 177 aa8.8□□□□□ -1
VARS-225ENST00000482996 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
VARS-225ENST00000482996 C2orf48Q96LS8 159 aa8.8□□□□□ -1
VARS-225ENST00000482996 PACRGQ96M98 296 aaPredicted RBP8.8□□□□□ -1
VARS-225ENST00000482996 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
VARS-225ENST00000482996 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
VARS-225ENST00000482996 A0A096LNI7 61 aa8.79□□□□□ -1
VARS-225ENST00000482996 LINC01546A6NGU7 62 aa8.79□□□□□ -1
VARS-225ENST00000482996 KRTAP29-1A8MX34 341 aaPredicted RBP8.79□□□□□ -1
VARS-225ENST00000482996 NUPR1O60356 82 aa8.79□□□□□ -1
VARS-225ENST00000482996 SPAG11BQ08648 103 aa8.79□□□□□ -1
VARS-225ENST00000482996 STPG4Q8N801 248 aa8.79□□□□□ -1
VARS-225ENST00000482996 OR10D4PQ8NGN7 298 aa8.79□□□□□ -1
VARS-225ENST00000482996 TMEM141Q96I45 108 aa8.79□□□□□ -1
VARS-225ENST00000482996 HIST1H2BLQ99880 126 aa8.79□□□□□ -1
VARS-225ENST00000482996 PKHD1L1Q86WI1 4243 aa8.78□□□□□ -1
VARS-225ENST00000482996 IGHV3OR16-9A0A0B4J2B5 98 aa8.78□□□□□ -1
VARS-225ENST00000482996 LOC107984640A0A0U1RRK4 108 aa8.78□□□□□ -1
VARS-225ENST00000482996 ATP5LO75964 103 aa8.78□□□□□ -1
VARS-225ENST00000482996 C2orf66Q6UXQ4 117 aa8.78□□□□□ -1
VARS-225ENST00000482996 Q6ZN92 141 aa8.78□□□□□ -1
VARS-225ENST00000482996 Q6ZRU5 148 aa8.78□□□□□ -1
VARS-225ENST00000482996 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
VARS-225ENST00000482996 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
VARS-225ENST00000482996 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
VARS-225ENST00000482996 TEX43Q6ZNM6 134 aa8.77□□□□□ -1.01
VARS-225ENST00000482996 C20orf202A1L168 122 aa8.76□□□□□ -1.01
VARS-225ENST00000482996 F8WDY8 70 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms