RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894		Q9HAA7	133 aa		10.2	□□□□□ -0.78
HDLBP-238	ENST00000479894	RPL39	P62891	51 aa	Known RBP	10.19	□□□□□ -0.78
HDLBP-238	ENST00000479894	C2orf88	Q9BSF0	95 aa		10.19	□□□□□ -0.78
HDLBP-238	ENST00000479894	VCX2	Q9H322	139 aa		10.19	□□□□□ -0.78
HDLBP-238	ENST00000479894	IGKV2D-24	A0A075B6R9	120 aa		10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894	ATP5L	O75964	103 aa		10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894	MT1HL1	P0DM35	61 aa		10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894	ENHO	Q6UWT2	76 aa		10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894	TEX43	Q6ZNM6	134 aa		10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894		Q8N3U1	123 aa		10.18	□□□□□ -0.78
HDLBP-238	ENST00000479894	TNXB	P22105	4242 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	IGIP	A6NJ69	53 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BK	O60814	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BJ	P06899	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BO	P23527	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BB	P33778	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BD	P58876	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BC	P62807	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	SEC11A	P67812	179 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST2H2BE	Q16778	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	CIRBP-AS1	Q8TBR5	109 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BH	Q93079	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BN	Q99877	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	HIST1H2BM	Q99879	126 aa		10.16	□□□□□ -0.78
HDLBP-238	ENST00000479894	IGLV4-3	A0A075B6K6	122 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	IGKV3OR2-268	A0A0C4DH90	116 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	LINC00959	A0A1B0GUT2	108 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	IFITM10	A6NMD0	228 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	WFDC2	Q14508	124 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	CFAP161	Q6P656	301 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	CLPSL2	Q6UWE3	100 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	URB1-AS1	Q96HZ7	61 aa		10.14	□□□□□ -0.79
HDLBP-238	ENST00000479894	SERF1A	O75920	110 aa		10.13	□□□□□ -0.79
HDLBP-238	ENST00000479894	C14orf177	Q52M58	125 aa		10.13	□□□□□ -0.79
HDLBP-238	ENST00000479894		Q6ZUT4	128 aa		10.13	□□□□□ -0.79
HDLBP-238	ENST00000479894	HSPB8	Q9UJY1	196 aa		10.13	□□□□□ -0.79
HDLBP-238	ENST00000479894	TRAV13-1	A0A0B4J241	112 aa		10.12	□□□□□ -0.79
HDLBP-238	ENST00000479894	RPL37A	P61513	92 aa	Known RBP	10.12	□□□□□ -0.79
HDLBP-238	ENST00000479894	CD164L2	Q6UWJ8	174 aa		10.12	□□□□□ -0.79
HDLBP-238	ENST00000479894	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.12	□□□□□ -0.79
HDLBP-238	ENST00000479894	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.11	□□□□□ -0.79
HDLBP-238	ENST00000479894	PDZD11	Q5EBL8	140 aa		10.11	□□□□□ -0.79
HDLBP-238	ENST00000479894	COA6	Q5JTJ3	125 aa	Known RBP	10.11	□□□□□ -0.79
HDLBP-238	ENST00000479894	PACRG	Q96M98	296 aa	Predicted RBP	10.11	□□□□□ -0.79
HDLBP-238	ENST00000479894	AMELX	Q99217	191 aa		10.11	□□□□□ -0.79
HDLBP-238	ENST00000479894	IGLV10-54	A0A075B6I4	117 aa		10.1	□□□□□ -0.79
HDLBP-238	ENST00000479894	HNRNPA3	P51991	378 aa	Known RBP	10.1	□□□□□ -0.79
HDLBP-238	ENST00000479894	PMVK	Q15126	192 aa		10.1	□□□□□ -0.79
HDLBP-238	ENST00000479894	GAGE12H	A6NDE8	117 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	LEPROTL1	O95214	131 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	S100A6	P06703	90 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	PRSS1	P07477	247 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	XCL1	P47992	114 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	NDUFA6	P56556	154 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	LINC01620	Q4KN68	170 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894		Q6ZRU5	148 aa		10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894	OPRPN	Q99935	248 aa	Predicted RBP	10.09	□□□□□ -0.79
HDLBP-238	ENST00000479894		A0A096LNJ9	63 aa		10.08	□□□□□ -0.8
HDLBP-238	ENST00000479894	APOM	O95445	188 aa		10.08	□□□□□ -0.8
HDLBP-238	ENST00000479894	PMCHL1	Q16048	86 aa		10.08	□□□□□ -0.8
HDLBP-238	ENST00000479894	RNASE13	Q5GAN3	156 aa	Known RBP	10.08	□□□□□ -0.8
HDLBP-238	ENST00000479894	IFI27L1	Q96BM0	104 aa		10.08	□□□□□ -0.8
HDLBP-238	ENST00000479894	CST9L	Q9H4G1	147 aa		10.08	□□□□□ -0.8
HDLBP-238	ENST00000479894	COX7A2L	O14548	114 aa		10.07	□□□□□ -0.8
HDLBP-238	ENST00000479894	MAL	P21145	153 aa		10.07	□□□□□ -0.8
HDLBP-238	ENST00000479894	UBE2D1	P51668	147 aa		10.07	□□□□□ -0.8
HDLBP-238	ENST00000479894	HERVK_113	P63121	156 aa		10.07	□□□□□ -0.8
HDLBP-238	ENST00000479894	FAM104A	Q969W3	186 aa		10.07	□□□□□ -0.8
HDLBP-238	ENST00000479894	GEMIN7	Q9H840	131 aa	Known RBP	10.07	□□□□□ -0.8
HDLBP-238	ENST00000479894	FAM19A3	Q7Z5A8	133 aa		10.06	□□□□□ -0.8
HDLBP-238	ENST00000479894	FAM19A2	Q8N3H0	131 aa		10.06	□□□□□ -0.8
HDLBP-238	ENST00000479894	BAALC	Q8WXS3	180 aa		10.06	□□□□□ -0.8
HDLBP-238	ENST00000479894	TRAV12-1	A0A0B4J245	112 aa		10.05	□□□□□ -0.8
HDLBP-238	ENST00000479894	LECT2	O14960	151 aa		10.05	□□□□□ -0.8
HDLBP-238	ENST00000479894	KRTAP26-1	Q6PEX3	210 aa		10.05	□□□□□ -0.8
HDLBP-238	ENST00000479894	LINC01561	Q8N1V8	128 aa		10.05	□□□□□ -0.8
HDLBP-238	ENST00000479894	MAP1LC3C	Q9BXW4	147 aa		10.05	□□□□□ -0.8
HDLBP-238	ENST00000479894	IGHV1-58	A0A0C4DH39	117 aa		10.04	□□□□□ -0.8
HDLBP-238	ENST00000479894	LINC00310	P59036	64 aa		10.04	□□□□□ -0.8
HDLBP-238	ENST00000479894	FOXI1	Q12951	378 aa		10.04	□□□□□ -0.8
HDLBP-238	ENST00000479894	LINC00242	Q5T6M2	205 aa		10.04	□□□□□ -0.8
HDLBP-238	ENST00000479894	LINC00173	Q6ZV60	143 aa		10.04	□□□□□ -0.8
HDLBP-238	ENST00000479894	TINCR	A0A1B0GVN0	87 aa		10.03	□□□□□ -0.8
HDLBP-238	ENST00000479894	USP17L23	D6RBM5	183 aa		10.03	□□□□□ -0.8
HDLBP-238	ENST00000479894		H3BRM9	83 aa		10.03	□□□□□ -0.8
HDLBP-238	ENST00000479894	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.02	□□□□□ -0.81
HDLBP-238	ENST00000479894	FABP4	P15090	132 aa		10.02	□□□□□ -0.81
HDLBP-238	ENST00000479894	S100A2	P29034	98 aa		10.02	□□□□□ -0.81
HDLBP-238	ENST00000479894	KRTAP9-2	Q9BYQ4	174 aa		10.02	□□□□□ -0.81
HDLBP-238	ENST00000479894		A0A087WZ39	114 aa		10.01	□□□□□ -0.81
HDLBP-238	ENST00000479894	NUPR1	O60356	82 aa		10.01	□□□□□ -0.81
HDLBP-238	ENST00000479894	AKR1D1	P51857	326 aa		10.01	□□□□□ -0.81
HDLBP-238	ENST00000479894	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.01	□□□□□ -0.81
HDLBP-238	ENST00000479894		F8WDY8	70 aa		10	□□□□□ -0.81
HDLBP-238	ENST00000479894	ZNF561-AS1	K7EIQ3	104 aa		10	□□□□□ -0.81
HDLBP-238	ENST00000479894	OR10D4P	Q8NGN7	298 aa		10	□□□□□ -0.81
HDLBP-238	ENST00000479894	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	9.99	□□□□□ -0.81
HDLBP-238	ENST00000479894		A0A0J9YXV3	536 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 165 ms