RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
C9orf3-217ENST00000479161 GVQW2A0A096LPI5 108 aaPredicted RBP10.04□□□□□ -0.8
C9orf3-217ENST00000479161 KIAA1644Q3SXP7 199 aa10.04□□□□□ -0.8
C9orf3-217ENST00000479161 Q6ZUT4 128 aa10.04□□□□□ -0.8
C9orf3-217ENST00000479161 Q8N1X5 172 aa10.04□□□□□ -0.8
C9orf3-217ENST00000479161 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
C9orf3-217ENST00000479161 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
C9orf3-217ENST00000479161 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-217ENST00000479161 IGHV1-58A0A0C4DH39 117 aa10.03□□□□□ -0.8
C9orf3-217ENST00000479161 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
C9orf3-217ENST00000479161 XCL1P47992 114 aa10.03□□□□□ -0.8
C9orf3-217ENST00000479161 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
C9orf3-217ENST00000479161 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 IGIPA6NJ69 53 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 PYY3Q5JQD4 70 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 PAPPA-AS1Q5QFB9 102 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 TMEM141Q96I45 108 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 FAM30AQ9NZY2 134 aa10.01□□□□□ -0.81
C9orf3-217ENST00000479161 TRAV13-1A0A0B4J241 112 aa10□□□□□ -0.81
C9orf3-217ENST00000479161 TOMM6Q96B49 74 aa10□□□□□ -0.81
C9orf3-217ENST00000479161 PACRGQ96M98 296 aaPredicted RBP10□□□□□ -0.81
C9orf3-217ENST00000479161 TIMM17AQ99595 171 aa10□□□□□ -0.81
C9orf3-217ENST00000479161 HIST1H2BLQ99880 126 aa10□□□□□ -0.81
C9orf3-217ENST00000479161 TRAPPC1Q9Y5R8 145 aa10□□□□□ -0.81
C9orf3-217ENST00000479161 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
C9orf3-217ENST00000479161 COX7A2LO14548 114 aa9.99□□□□□ -0.81
C9orf3-217ENST00000479161 SLPIP03973 132 aa9.99□□□□□ -0.81
C9orf3-217ENST00000479161 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
C9orf3-217ENST00000479161 AMELXQ99217 191 aa9.99□□□□□ -0.81
C9orf3-217ENST00000479161 FABP4P15090 132 aa9.98□□□□□ -0.81
C9orf3-217ENST00000479161 RNASE13Q5GAN3 156 aaKnown RBP9.98□□□□□ -0.81
C9orf3-217ENST00000479161 Q6ZN92 141 aa9.98□□□□□ -0.81
C9orf3-217ENST00000479161 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
C9orf3-217ENST00000479161 ERASQ7Z444 233 aa9.98□□□□□ -0.81
C9orf3-217ENST00000479161 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
C9orf3-217ENST00000479161 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
C9orf3-217ENST00000479161 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
C9orf3-217ENST00000479161 IGHV3-64A0A075B6Q5 118 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 F8WDY8 70 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 APOMO95445 188 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 JOSD1Q15040 202 aaPredicted RBP9.97□□□□□ -0.81
C9orf3-217ENST00000479161 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 C2orf88Q9BSF0 95 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 VCX2Q9H322 139 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
C9orf3-217ENST00000479161 FAT1Q14517 4588 aa9.96□□□□□ -0.81
C9orf3-217ENST00000479161 MALP21145 153 aa9.96□□□□□ -0.82
C9orf3-217ENST00000479161 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
C9orf3-217ENST00000479161 LINC01620Q4KN68 170 aa9.96□□□□□ -0.82
C9orf3-217ENST00000479161 KRTAP4-5Q9BYR2 181 aa9.96□□□□□ -0.82
C9orf3-217ENST00000479161 LINC00587B1AMM8 73 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 UBE2D1P51668 147 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 LINC00242Q5T6M2 205 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 LINC00173Q6ZV60 143 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
C9orf3-217ENST00000479161 A0A087WZ39 114 aa9.94□□□□□ -0.82
C9orf3-217ENST00000479161 SEC11AP67812 179 aa9.94□□□□□ -0.82
C9orf3-217ENST00000479161 HIGD2BQ4VC39 106 aa9.94□□□□□ -0.82
C9orf3-217ENST00000479161 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
C9orf3-217ENST00000479161 LINC00614P0C842 121 aa9.93□□□□□ -0.82
C9orf3-217ENST00000479161 EPM2AB3EWF7 344 aa9.92□□□□□ -0.82
C9orf3-217ENST00000479161 TSTD3H0UI37 97 aa9.92□□□□□ -0.82
C9orf3-217ENST00000479161 SCXQ7RTU7 201 aa9.92□□□□□ -0.82
C9orf3-217ENST00000479161 C5orf38Q86SI9 138 aa9.92□□□□□ -0.82
C9orf3-217ENST00000479161 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
C9orf3-217ENST00000479161 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
C9orf3-217ENST00000479161 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
C9orf3-217ENST00000479161 RNF151Q2KHN1 245 aa9.91□□□□□ -0.82
C9orf3-217ENST00000479161 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
C9orf3-217ENST00000479161 IGLV4-69A0A075B6H9 119 aa9.9□□□□□ -0.82
C9orf3-217ENST00000479161 HERVK_113P63121 156 aa9.9□□□□□ -0.82
C9orf3-217ENST00000479161 URB1-AS1Q96HZ7 61 aa9.9□□□□□ -0.82
C9orf3-217ENST00000479161 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
C9orf3-217ENST00000479161 LINC00474Q9P2X8 69 aa9.89□□□□□ -0.83
C9orf3-217ENST00000479161 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
C9orf3-217ENST00000479161 COX6A2Q02221 97 aa9.88□□□□□ -0.83
C9orf3-217ENST00000479161 CHCHD1Q96BP2 118 aaKnown RBP9.88□□□□□ -0.83
C9orf3-217ENST00000479161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
C9orf3-217ENST00000479161 A0A096LNJ9 63 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
C9orf3-217ENST00000479161 HBDP02042 147 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 Q5VSD8 79 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 ORAOV1Q8WV07 137 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
C9orf3-217ENST00000479161 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
C9orf3-217ENST00000479161 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
C9orf3-217ENST00000479161 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
C9orf3-217ENST00000479161 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-217ENST00000479161 PMVKQ15126 192 aa9.86□□□□□ -0.83
C9orf3-217ENST00000479161 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
C9orf3-217ENST00000479161 IGLV5-45A0A087WSX0 123 aa9.85□□□□□ -0.83
C9orf3-217ENST00000479161 PLA2G1BP04054 148 aaKnown RBP9.85□□□□□ -0.83
C9orf3-217ENST00000479161 HAMPP81172 84 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms