RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 FAT1Q14517 4588 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 IGKV2D-24A0A075B6R9 120 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 IGLV5-52A0A0A0MRZ9 124 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 IGIPA6NJ69 53 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
HDAC6-221ENST00000477561 GAGE6Q13070 117 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 MPV17L2Q567V2 206 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 Q8N814 137 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 Q8N976 141 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 BAALCQ8WXS3 180 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 TIMM21Q9BVV7 248 aa5.49□□□□□ -1.53
HDAC6-221ENST00000477561 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.48□□□□□ -1.53
HDAC6-221ENST00000477561 IGKV2-29A2NJV5 120 aaPredicted RBP5.48□□□□□ -1.53
HDAC6-221ENST00000477561 HSBP1L1C9JCN9 74 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 GCSHP23434 173 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 PKIAP61925 76 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 PMVKQ15126 192 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 AMMECR1LQ6DCA0 310 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 TEX43Q6ZNM6 134 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 UBE2D4Q9Y2X8 147 aa5.48□□□□□ -1.53
HDAC6-221ENST00000477561 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 ANGP03950 147 aaKnown RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 ZNF25P17030 456 aaPredicted RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 PLNP26678 52 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 XGP55808 180 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 HAMPP81172 84 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 MRPS36P82909 103 aaKnown RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 CLPSL2Q6UWE3 100 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 ENHOQ6UWT2 76 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 MRPL52Q86TS9 123 aaKnown RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 RMI2Q96E14 147 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 TMEM101Q96IK0 257 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 VAMP8Q9BV40 100 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 VCX2Q9H322 139 aa5.47□□□□□ -1.53
HDAC6-221ENST00000477561 CHTOPQ9Y3Y2 248 aaKnown RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 CSDC2Q9Y534 153 aaKnown RBP5.47□□□□□ -1.53
HDAC6-221ENST00000477561 IGLV4-3A0A075B6K6 122 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 F8VRH5 84 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 DPM2O94777 84 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 IGKCP01834 107 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 CRPP02741 224 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 FGF6P10767 208 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 RBX1P62877 108 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 ODF1Q14990 250 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 Q8N1X5 172 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 OR5A1Q8NGJ0 315 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-221ENST00000477561 C2orf88Q9BSF0 95 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 CST9LQ9H4G1 147 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 COX11Q9Y6N1 276 aa5.46□□□□□ -1.54
HDAC6-221ENST00000477561 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
HDAC6-221ENST00000477561 LINC01620Q4KN68 170 aa5.45□□□□□ -1.54
HDAC6-221ENST00000477561 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
HDAC6-221ENST00000477561 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
HDAC6-221ENST00000477561 AMELXQ99217 191 aa5.45□□□□□ -1.54
HDAC6-221ENST00000477561 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
HDAC6-221ENST00000477561 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
HDAC6-221ENST00000477561 MRPL35Q9NZE8 188 aaKnown RBP5.45□□□□□ -1.54
HDAC6-221ENST00000477561 TSTD3H0UI37 97 aa5.44□□□□□ -1.54
HDAC6-221ENST00000477561 SPATA45Q537H7 98 aa5.44□□□□□ -1.54
HDAC6-221ENST00000477561 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
HDAC6-221ENST00000477561 FAM30AQ9NZY2 134 aa5.44□□□□□ -1.54
HDAC6-221ENST00000477561 PAM16Q9Y3D7 125 aa5.44□□□□□ -1.54
HDAC6-221ENST00000477561 IGLV4-60A0A075B6I1 120 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 IGLV10-54A0A075B6I4 117 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 A0A1B0GUV1 79 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 TMEM238LA0A1B0GVL6 79 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 SEC11AP67812 179 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 Q6ZUT4 128 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 ZNF664Q8N3J9 261 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 CDC42SE2Q9NRR3 84 aa5.43□□□□□ -1.54
HDAC6-221ENST00000477561 hDV102S1A0JD36 115 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 IGLC3P0DOY3 106 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 HERVK_113P61574 105 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 REG3AQ06141 175 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 MIAQ16674 131 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 PRR34Q9NV39 138 aa5.42□□□□□ -1.54
HDAC6-221ENST00000477561 IGLV4-69A0A075B6H9 119 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 IGKV3OR2-268A0A0C4DH90 116 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 TINCRA0A1B0GVN0 87 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 C11orf86A6NJI1 115 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 USP17L23D6RBM5 183 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 UBE2D1P51668 147 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
HDAC6-221ENST00000477561 ZC2HC1BQ5TFG8 222 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 KRTAP26-1Q6PEX3 210 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 CHAC1Q9BUX1 264 aa5.41□□□□□ -1.54
HDAC6-221ENST00000477561 GEMIN7Q9H840 131 aaKnown RBP5.41□□□□□ -1.54
HDAC6-221ENST00000477561 A0A0J9YXV3 536 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 FAM229AH3BQW9 127 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 H3BRM9 83 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 CCL25O15444 150 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 HERVK_113P63121 156 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 MAJINQ3KP22 176 aa5.4□□□□□ -1.54
HDAC6-221ENST00000477561 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms