RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 C1orf196B1AJZ1 125 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 M0QXV9 152 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 C9orf129Q5T035 196 aaKnown RBP5.7□□□□□ -1.5
COL4A5-204ENST00000477429 SMIM12Q96EX1 92 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 MANBALQ9NQG1 85 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 MED9Q9NWA0 146 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 MRPL35Q9NZE8 188 aaKnown RBP5.7□□□□□ -1.5
COL4A5-204ENST00000477429 C7orf77A4D0Y5 90 aa5.69□□□□□ -1.5
COL4A5-204ENST00000477429 RPL13AP40429 203 aaKnown RBP5.69□□□□□ -1.5
COL4A5-204ENST00000477429 ORAOV1Q8WV07 137 aa5.69□□□□□ -1.5
COL4A5-204ENST00000477429 KRTAP4-1Q9BYQ7 146 aa5.69□□□□□ -1.5
COL4A5-204ENST00000477429 SMDT1Q9H4I9 107 aa5.69□□□□□ -1.5
COL4A5-204ENST00000477429 CARHSP1Q9Y2V2 147 aaKnown RBP5.69□□□□□ -1.5
COL4A5-204ENST00000477429 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
COL4A5-204ENST00000477429 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
COL4A5-204ENST00000477429 TLX1NBP0CAT3 122 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 RAB4AP20338 218 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 KIAA0087Q14695 138 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 KRTAP13-2Q52LG2 175 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 AMN1Q8IY45 258 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 NRACQ8N912 160 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 USH2AO75445 5202 aa5.68□□□□□ -1.5
COL4A5-204ENST00000477429 IGHV3OR16-9A0A0B4J2B5 98 aa5.67□□□□□ -1.5
COL4A5-204ENST00000477429 ZNF861PO60384 105 aa5.67□□□□□ -1.5
COL4A5-204ENST00000477429 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
COL4A5-204ENST00000477429 UBE2BP63146 152 aa5.67□□□□□ -1.5
COL4A5-204ENST00000477429 ZNF345Q14585 488 aa5.67□□□□□ -1.5
COL4A5-204ENST00000477429 TEX261Q6UWH6 196 aa5.67□□□□□ -1.5
COL4A5-204ENST00000477429 CSDC2Q9Y534 153 aaKnown RBP5.67□□□□□ -1.5
COL4A5-204ENST00000477429 C2orf82Q6UX34 121 aa5.66□□□□□ -1.5
COL4A5-204ENST00000477429 OR10D4PQ8NGN7 298 aa5.66□□□□□ -1.5
COL4A5-204ENST00000477429 NDUFA1O15239 70 aa5.65□□□□□ -1.5
COL4A5-204ENST00000477429 PDE6DO43924 150 aa5.65□□□□□ -1.5
COL4A5-204ENST00000477429 NPSP0C0P6 89 aa5.65□□□□□ -1.5
COL4A5-204ENST00000477429 SMIM15Q7Z3B0 74 aa5.65□□□□□ -1.5
COL4A5-204ENST00000477429 TSKUQ8WUA8 353 aa5.65□□□□□ -1.5
COL4A5-204ENST00000477429 IMMP2LQ96T52 175 aa5.65□□□□□ -1.5
COL4A5-204ENST00000477429 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
COL4A5-204ENST00000477429 GATCO43716 136 aaKnown RBP5.64□□□□□ -1.51
COL4A5-204ENST00000477429 TMEM191AQ9H0A3 160 aa5.64□□□□□ -1.51
COL4A5-204ENST00000477429 BIN3Q9NQY0 253 aa5.64□□□□□ -1.51
COL4A5-204ENST00000477429 NEBP20929 6669 aa5.64□□□□□ -1.51
COL4A5-204ENST00000477429 KANTRA0A1W2PQU2 76 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 HMSDA8MTL9 139 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 VCYO14598 125 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 FCER1GP30273 86 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 LINC00242Q5T6M2 205 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 LINC00469Q8N7U9 141 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 TIMM21Q9BVV7 248 aa5.63□□□□□ -1.51
COL4A5-204ENST00000477429 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
COL4A5-204ENST00000477429 TMEM241Q24JQ0 296 aa5.62□□□□□ -1.51
COL4A5-204ENST00000477429 FAM231DQ6ZW35 169 aa5.62□□□□□ -1.51
COL4A5-204ENST00000477429 C22orf24Q9Y442 160 aa5.62□□□□□ -1.51
COL4A5-204ENST00000477429 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
COL4A5-204ENST00000477429 A0A1B0GUT8 65 aa5.61□□□□□ -1.51
COL4A5-204ENST00000477429 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
COL4A5-204ENST00000477429 A8MWL6 223 aa5.61□□□□□ -1.51
COL4A5-204ENST00000477429 NDUFC2-KCTD14E9PQ53 114 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 F8WDY8 70 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 CRYGAP11844 174 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 MRPL51Q4U2R6 128 aaKnown RBP5.6□□□□□ -1.51
COL4A5-204ENST00000477429 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 FAM210AQ96ND0 272 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 XAGE1AQ9HD64 81 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 BATF3Q9NR55 127 aa5.6□□□□□ -1.51
COL4A5-204ENST00000477429 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.51
COL4A5-204ENST00000477429 TRBV30A0A0K0K1B3 111 aa5.58□□□□□ -1.52
COL4A5-204ENST00000477429 IFITM10A6NMD0 228 aa5.58□□□□□ -1.52
COL4A5-204ENST00000477429 TCAPO15273 167 aa5.58□□□□□ -1.52
COL4A5-204ENST00000477429 MRPS36P82909 103 aaKnown RBP5.58□□□□□ -1.52
COL4A5-204ENST00000477429 KIR2DL4Q99706 377 aa5.58□□□□□ -1.52
COL4A5-204ENST00000477429 RPL37AP8A6NKH3 93 aa5.57□□□□□ -1.52
COL4A5-204ENST00000477429 BCE1O60756 84 aa5.57□□□□□ -1.52
COL4A5-204ENST00000477429 LINC00173Q6ZV60 143 aa5.57□□□□□ -1.52
COL4A5-204ENST00000477429 LINC00304Q8N9R0 145 aa5.57□□□□□ -1.52
COL4A5-204ENST00000477429 V9GYV3 84 aa5.57□□□□□ -1.52
COL4A5-204ENST00000477429 ZNF727A8MUV8 499 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 NUPR1O60356 82 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 CEBPGP53567 150 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 HBBP68871 147 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 FAM104BQ5XKR9 115 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 LINC01551Q86U37 167 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 LINC00167Q96N53 147 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
COL4A5-204ENST00000477429 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 TRBV24-1A0A075B6N3 115 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 TGIF2-C20orf24A0A0A6YYL0 155 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 SCO1O75880 301 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 NPYP01303 97 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 RPL28P46779 137 aaKnown RBP5.55□□□□□ -1.52
COL4A5-204ENST00000477429 BLOC1S1P78537 153 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 MRPL55Q7Z7F7 128 aaKnown RBP5.55□□□□□ -1.52
COL4A5-204ENST00000477429 BORCS7Q96B45 105 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 SPANXA1Q9NS26 97 aa5.55□□□□□ -1.52
COL4A5-204ENST00000477429 TMEM250H0YL14 139 aa5.54□□□□□ -1.52
COL4A5-204ENST00000477429 TEX46H3BTG2 121 aa5.54□□□□□ -1.52
COL4A5-204ENST00000477429 RPL32P62910 135 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms