RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 FAM104AQ969W3 186 aa7.51□□□□□ -1.21
TRAF4-209ENST00000473421 C2orf48Q96LS8 159 aa7.51□□□□□ -1.21
TRAF4-209ENST00000473421 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
TRAF4-209ENST00000473421 PDE6DO43924 150 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 TSPAN13O95857 204 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 S100PP25815 95 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 SPAG11BQ08648 103 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 Q6ZUT4 128 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
TRAF4-209ENST00000473421 RPS10P5Q9NQ39 176 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 UBE2D4Q9Y2X8 147 aa7.5□□□□□ -1.21
TRAF4-209ENST00000473421 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
TRAF4-209ENST00000473421 C7orf77A4D0Y5 90 aa7.49□□□□□ -1.21
TRAF4-209ENST00000473421 RAB5AP20339 215 aa7.49□□□□□ -1.21
TRAF4-209ENST00000473421 RAB4AP20338 218 aa7.48□□□□□ -1.21
TRAF4-209ENST00000473421 RNF151Q2KHN1 245 aa7.48□□□□□ -1.21
TRAF4-209ENST00000473421 UNQ6190/PRO20217Q6UXQ8 127 aa7.48□□□□□ -1.21
TRAF4-209ENST00000473421 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
TRAF4-209ENST00000473421 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
TRAF4-209ENST00000473421 TAGLN2P37802 199 aaKnown RBP7.47□□□□□ -1.21
TRAF4-209ENST00000473421 PNRC1Q12796 327 aaPredicted RBP7.47□□□□□ -1.21
TRAF4-209ENST00000473421 GAGE2EQ4V326 116 aa7.47□□□□□ -1.21
TRAF4-209ENST00000473421 SMIM15Q7Z3B0 74 aa7.47□□□□□ -1.21
TRAF4-209ENST00000473421 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
TRAF4-209ENST00000473421 C6orf48Q9UBA6 75 aa7.47□□□□□ -1.21
TRAF4-209ENST00000473421 GAGE2DQ9UEU5 116 aa7.47□□□□□ -1.21
TRAF4-209ENST00000473421 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
TRAF4-209ENST00000473421 NRACQ8N912 160 aa7.46□□□□□ -1.22
TRAF4-209ENST00000473421 MRPL35Q9NZE8 188 aaKnown RBP7.46□□□□□ -1.22
TRAF4-209ENST00000473421 CSDC2Q9Y534 153 aaKnown RBP7.46□□□□□ -1.22
TRAF4-209ENST00000473421 A0A0U1RQV1 116 aa7.45□□□□□ -1.22
TRAF4-209ENST00000473421 UBE2D1P51668 147 aa7.45□□□□□ -1.22
TRAF4-209ENST00000473421 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
TRAF4-209ENST00000473421 ORAOV1Q8WV07 137 aa7.45□□□□□ -1.22
TRAF4-209ENST00000473421 A0A087X002 238 aa7.44□□□□□ -1.22
TRAF4-209ENST00000473421 IGHV3OR16-9A0A0B4J2B5 98 aa7.44□□□□□ -1.22
TRAF4-209ENST00000473421 C9JQL5 133 aa7.44□□□□□ -1.22
TRAF4-209ENST00000473421 RPL39P62891 51 aaKnown RBP7.44□□□□□ -1.22
TRAF4-209ENST00000473421 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
TRAF4-209ENST00000473421 YPEL4Q96NS1 127 aa7.44□□□□□ -1.22
TRAF4-209ENST00000473421 TMEM191AQ9H0A3 160 aa7.44□□□□□ -1.22
TRAF4-209ENST00000473421 A8MWL6 223 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 M0QXV9 152 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 VCYO14598 125 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 FCER1GP30273 86 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 FABP9Q0Z7S8 132 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 OR10D4PQ8NGN7 298 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 CTDSP1Q9GZU7 261 aa7.43□□□□□ -1.22
TRAF4-209ENST00000473421 MUC17Q685J3 4493 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
TRAF4-209ENST00000473421 S100A2P29034 98 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 KIAA0087Q14695 138 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 C2orf82Q6UX34 121 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 IMMP2LQ96T52 175 aa7.42□□□□□ -1.22
TRAF4-209ENST00000473421 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
TRAF4-209ENST00000473421 NDUFA1O15239 70 aa7.41□□□□□ -1.22
TRAF4-209ENST00000473421 RPL13AP40429 203 aaKnown RBP7.41□□□□□ -1.22
TRAF4-209ENST00000473421 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
TRAF4-209ENST00000473421 UBE2BP63146 152 aa7.41□□□□□ -1.22
TRAF4-209ENST00000473421 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
TRAF4-209ENST00000473421 TSKUQ8WUA8 353 aa7.4□□□□□ -1.22
TRAF4-209ENST00000473421 TIMM21Q9BVV7 248 aa7.4□□□□□ -1.22
TRAF4-209ENST00000473421 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
TRAF4-209ENST00000473421 TMEM250H0YL14 139 aa7.39□□□□□ -1.23
TRAF4-209ENST00000473421 ZNF861PO60384 105 aa7.39□□□□□ -1.23
TRAF4-209ENST00000473421 TRBV24-1A0A075B6N3 115 aa7.38□□□□□ -1.23
TRAF4-209ENST00000473421 PPP1R2P9O14990 202 aa7.38□□□□□ -1.23
TRAF4-209ENST00000473421 TMEM241Q24JQ0 296 aa7.38□□□□□ -1.23
TRAF4-209ENST00000473421 MRPL51Q4U2R6 128 aaKnown RBP7.38□□□□□ -1.23
TRAF4-209ENST00000473421 CT83Q5H943 113 aa7.38□□□□□ -1.23
TRAF4-209ENST00000473421 CEBPGP53567 150 aa7.37□□□□□ -1.23
TRAF4-209ENST00000473421 LBHQ53QV2 105 aaPredicted RBP7.37□□□□□ -1.23
TRAF4-209ENST00000473421 KIR2DL4Q99706 377 aa7.37□□□□□ -1.23
TRAF4-209ENST00000473421 F8WDY8 70 aa7.36□□□□□ -1.23
TRAF4-209ENST00000473421 LINC01551Q86U37 167 aa7.36□□□□□ -1.23
TRAF4-209ENST00000473421 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
TRAF4-209ENST00000473421 BORCS7Q96B45 105 aa7.36□□□□□ -1.23
TRAF4-209ENST00000473421 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 LINC00587B1AMM8 73 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 LINC00242Q5T6M2 205 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 V9GYV3 84 aa7.35□□□□□ -1.23
TRAF4-209ENST00000473421 TSTD3H0UI37 97 aa7.34□□□□□ -1.23
TRAF4-209ENST00000473421 TCAPO15273 167 aa7.34□□□□□ -1.23
TRAF4-209ENST00000473421 COA6Q5JTJ3 125 aaKnown RBP7.34□□□□□ -1.23
TRAF4-209ENST00000473421 ZC2HC1BQ5TFG8 222 aa7.34□□□□□ -1.23
TRAF4-209ENST00000473421 FAM104BQ5XKR9 115 aa7.34□□□□□ -1.23
TRAF4-209ENST00000473421 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.23
TRAF4-209ENST00000473421 C22orf24Q9Y442 160 aa7.34□□□□□ -1.23
TRAF4-209ENST00000473421 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
TRAF4-209ENST00000473421 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms