RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 NDUFA7O95182 113 aa9.51□□□□□ -0.89
SCAMP4-207ENST00000472442 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 ACYP1P07311 99 aa9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 PPDPFQ9H3Y8 114 aa9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
SCAMP4-207ENST00000472442 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 COX7A2LO14548 114 aa9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 NDUFA1O15239 70 aa9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 LINC00308Q8TCZ7 52 aa9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 C9orf153Q5TBE3 101 aa9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 Q6ZSN1 163 aa9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.49□□□□□ -0.89
SCAMP4-207ENST00000472442 EDA2RQ9HAV5 297 aa9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 INAFM1C9JVW0 142 aa9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 CIRBPQ14011 172 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 DAZ4Q86SG3 579 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 Q9H8V8 135 aa9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 DAZ3Q9NR90 486 aaKnown RBP9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 LINC00643Q86TS7 51 aa9.48□□□□□ -0.89
SCAMP4-207ENST00000472442 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
SCAMP4-207ENST00000472442 LINC00694P0DN24 101 aa9.46□□□□□ -0.89
SCAMP4-207ENST00000472442 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.9
SCAMP4-207ENST00000472442 COX6A2Q02221 97 aa9.46□□□□□ -0.9
SCAMP4-207ENST00000472442 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
SCAMP4-207ENST00000472442 HIVEP1P15822 2718 aa9.45□□□□□ -0.9
SCAMP4-207ENST00000472442 XCL2Q9UBD3 114 aa9.45□□□□□ -0.9
SCAMP4-207ENST00000472442 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 IGLV1-51P01701 117 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 BAALC-AS2P0C853 105 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 BEAN1Q3B7T3 259 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 STHQ8IWL8 128 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 FN1P02751 2386 aaKnown RBP9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 UQCRQO14949 82 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 TIRAPP58753 221 aa9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 KLK5Q9Y337 293 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-207ENST00000472442 INSP01308 110 aa9.43□□□□□ -0.9
SCAMP4-207ENST00000472442 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
SCAMP4-207ENST00000472442 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
SCAMP4-207ENST00000472442 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
SCAMP4-207ENST00000472442 NACAE9PAV3 2078 aa9.43□□□□□ -0.9
SCAMP4-207ENST00000472442 IGHV3OR16-12A0A075B7B8 117 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 TRACP01848 142 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 HERVK_113P63121 156 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 WFDC10AQ9H1F0 79 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 JMJD1CQ15652 2540 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 GAGE2AQ6NT46 116 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
SCAMP4-207ENST00000472442 C2CD3Q4AC94 2353 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 LOC107984640A0A0U1RRK4 108 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 LINC00242Q5T6M2 205 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 DNAJC30Q96LL9 226 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 PRIMA1Q86XR5 153 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 Q9HAA7 133 aa9.41□□□□□ -0.9
SCAMP4-207ENST00000472442 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
SCAMP4-207ENST00000472442 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.9
SCAMP4-207ENST00000472442 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
SCAMP4-207ENST00000472442 ATP5G1P05496 136 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 CXCL5P42830 114 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 VWFP04275 2813 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
SCAMP4-207ENST00000472442 INAFM2P0DMQ5 153 aa9.38□□□□□ -0.91
SCAMP4-207ENST00000472442 COX7CP15954 63 aa9.38□□□□□ -0.91
SCAMP4-207ENST00000472442 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
SCAMP4-207ENST00000472442 LINC00482Q8N8I6 264 aa9.38□□□□□ -0.91
SCAMP4-207ENST00000472442 SPATA3Q8NHX4 192 aa9.37□□□□□ -0.91
SCAMP4-207ENST00000472442 TENM1Q9UKZ4 2725 aa9.37□□□□□ -0.91
SCAMP4-207ENST00000472442 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
SCAMP4-207ENST00000472442 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
SCAMP4-207ENST00000472442 RS1O15537 224 aa9.36□□□□□ -0.91
SCAMP4-207ENST00000472442 MALP21145 153 aa9.36□□□□□ -0.91
SCAMP4-207ENST00000472442 C2orf48Q96LS8 159 aa9.36□□□□□ -0.91
SCAMP4-207ENST00000472442 PF4P02776 101 aa9.36□□□□□ -0.91
SCAMP4-207ENST00000472442 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
SCAMP4-207ENST00000472442 RPL35AP18077 110 aaKnown RBP9.35□□□□□ -0.91
SCAMP4-207ENST00000472442 J3KT08 172 aa9.34□□□□□ -0.91
SCAMP4-207ENST00000472442 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-207ENST00000472442 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-207ENST00000472442 hADV29S1A0JD25 119 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 ATOX1O00244 68 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 DNAL4O96015 105 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 F5H768 121 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 CRPP02741 224 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 CRYGAP11844 174 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 CYSTM1Q9H1C7 97 aa9.33□□□□□ -0.92
SCAMP4-207ENST00000472442 LINC00337Q8N6G1 96 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms