RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 SMAGPQ0VAQ4 97 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 SMIM15Q7Z3B0 74 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 CNFNQ9BYD5 112 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 CYTL1Q9NRR1 136 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
ITGB1-209ENST00000472147 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
ITGB1-209ENST00000472147 TRBV6-5A0A0K0K1A5 114 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 SDHAF1A6NFY7 115 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 BCL2L11O43521 198 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 ZNF861PO60384 105 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 TSPAN13O95857 204 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 TLX1NBP0CAT3 122 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 BCL2P10415 239 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 SMIM29Q86T20 159 aa3.43□□□□□ -1.86
ITGB1-209ENST00000472147 OPRPNQ99935 248 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-209ENST00000472147 MRPL35Q9NZE8 188 aaKnown RBP3.43□□□□□ -1.86
ITGB1-209ENST00000472147 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
ITGB1-209ENST00000472147 CCL20P78556 96 aa3.42□□□□□ -1.86
ITGB1-209ENST00000472147 RPL24P83731 157 aaKnown RBP3.42□□□□□ -1.86
ITGB1-209ENST00000472147 RPL18AQ02543 176 aaKnown RBP3.42□□□□□ -1.86
ITGB1-209ENST00000472147 Q5BKY6 102 aa3.42□□□□□ -1.86
ITGB1-209ENST00000472147 KCNRGQ8N5I3 272 aa3.42□□□□□ -1.86
ITGB1-209ENST00000472147 OR10D4PQ8NGN7 298 aa3.42□□□□□ -1.86
ITGB1-209ENST00000472147 MRAP2Q96G30 205 aa3.42□□□□□ -1.86
ITGB1-209ENST00000472147 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
ITGB1-209ENST00000472147 TRBV27A0A0K0K1C4 114 aa3.41□□□□□ -1.86
ITGB1-209ENST00000472147 GIPP09681 153 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-209ENST00000472147 CRYGAP11844 174 aa3.41□□□□□ -1.86
ITGB1-209ENST00000472147 GNG4P50150 75 aa3.41□□□□□ -1.86
ITGB1-209ENST00000472147 POLR2KP53803 58 aaKnown RBP3.41□□□□□ -1.86
ITGB1-209ENST00000472147 KRTAP11-1Q8IUC1 163 aa3.41□□□□□ -1.86
ITGB1-209ENST00000472147 C11orf52Q96A22 123 aa3.41□□□□□ -1.86
ITGB1-209ENST00000472147 ST20Q9HBF5 79 aa3.41□□□□□ -1.86
ITGB1-209ENST00000472147 PDE6DO43924 150 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 TSHBP01222 138 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 CTRLP40313 264 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 FOXA3P55318 350 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-209ENST00000472147 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-209ENST00000472147 UBE2BP63146 152 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 LBHQ53QV2 105 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-209ENST00000472147 CENPWQ5EE01 88 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 C5orf38Q86SI9 138 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 RPL39LQ96EH5 51 aaKnown RBP3.4□□□□□ -1.87
ITGB1-209ENST00000472147 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 ALG5Q9Y673 324 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 MUC17Q685J3 4493 aa3.4□□□□□ -1.87
ITGB1-209ENST00000472147 FXYD6-FXYD2A0A087WZ82 144 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 TRAV13-1A0A0B4J241 112 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 RAB19A4D1S5 217 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 NDUFA1O15239 70 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 NUPR1O60356 82 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 PPP1R17O96001 155 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 UBE2V1Q13404 147 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 FAM213BQ8TBF2 198 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 MANBALQ9NQG1 85 aa3.39□□□□□ -1.87
ITGB1-209ENST00000472147 IGLV7-46A0A075B6I9 117 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 C7orf77A4D0Y5 90 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 TEX46H3BTG2 121 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
ITGB1-209ENST00000472147 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 GAGE2EQ4V326 116 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 GAGE2AQ6NT46 116 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 UNQ6190/PRO20217Q6UXQ8 127 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 SMDT1Q9H4I9 107 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 MED9Q9NWA0 146 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 GAGE2DQ9UEU5 116 aa3.38□□□□□ -1.87
ITGB1-209ENST00000472147 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 A8MWL6 223 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 NDUFC2-KCTD14E9PQ53 114 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 M0QXV9 152 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 FCER1GP30273 86 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-209ENST00000472147 KIR2DL4Q99706 377 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 TMEM191AQ9H0A3 160 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 RNASE7Q9H1E1 156 aaKnown RBP3.37□□□□□ -1.87
ITGB1-209ENST00000472147 GNG13Q9P2W3 67 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 UBE2D4Q9Y2X8 147 aa3.37□□□□□ -1.87
ITGB1-209ENST00000472147 TRBV20OR9-2A0A075B6H5 130 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 A0A087X002 238 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 A0A1B0GV50 99 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 TCAPO15273 167 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 ARPC5O15511 151 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 RAB4AP20338 218 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 TAGLN2P37802 199 aaKnown RBP3.36□□□□□ -1.87
ITGB1-209ENST00000472147 KIAA0087Q14695 138 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 LINC00173Q6ZV60 143 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 OCC1Q8TAD7 63 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 ORAOV1Q8WV07 137 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 TMEM242Q9NWH2 141 aa3.36□□□□□ -1.87
ITGB1-209ENST00000472147 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms