RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CEBPGP53567 150 aa11.13□□□□□ -0.63
SORT1-203ENST00000471996 TPRXLQ17RH7 258 aa11.13□□□□□ -0.63
SORT1-203ENST00000471996 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
SORT1-203ENST00000471996 SMIM7Q9BQ49 75 aa11.13□□□□□ -0.63
SORT1-203ENST00000471996 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
SORT1-203ENST00000471996 C6orf48Q9UBA6 75 aa11.12□□□□□ -0.63
SORT1-203ENST00000471996 UBE2D4Q9Y2X8 147 aa11.12□□□□□ -0.63
SORT1-203ENST00000471996 ZNF727A8MUV8 499 aa11.11□□□□□ -0.63
SORT1-203ENST00000471996 SRP19P09132 144 aaKnown RBP11.11□□□□□ -0.63
SORT1-203ENST00000471996 FAM74A3Q4VXF1 159 aa11.11□□□□□ -0.63
SORT1-203ENST00000471996 UNQ6190/PRO20217Q6UXQ8 127 aa11.11□□□□□ -0.63
SORT1-203ENST00000471996 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
SORT1-203ENST00000471996 RETNLBQ9BQ08 111 aa11.11□□□□□ -0.63
SORT1-203ENST00000471996 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
SORT1-203ENST00000471996 LINC01551Q86U37 167 aa11.1□□□□□ -0.63
SORT1-203ENST00000471996 OSTCQ9NRP0 149 aa11.1□□□□□ -0.63
SORT1-203ENST00000471996 CRYGAP11844 174 aa11.09□□□□□ -0.63
SORT1-203ENST00000471996 Q6ZUT4 128 aa11.08□□□□□ -0.64
SORT1-203ENST00000471996 FCER1GP30273 86 aa11.07□□□□□ -0.64
SORT1-203ENST00000471996 IGHV3OR16-9A0A0B4J2B5 98 aa11.06□□□□□ -0.64
SORT1-203ENST00000471996 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
SORT1-203ENST00000471996 VCYO14598 125 aa11.06□□□□□ -0.64
SORT1-203ENST00000471996 NUPR1O60356 82 aa11.06□□□□□ -0.64
SORT1-203ENST00000471996 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
SORT1-203ENST00000471996 IGLV7-46A0A075B6I9 117 aa11.05□□□□□ -0.64
SORT1-203ENST00000471996 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
SORT1-203ENST00000471996 LINC01547P58512 204 aaPredicted RBP11.05□□□□□ -0.64
SORT1-203ENST00000471996 PEA15Q15121 130 aa11.05□□□□□ -0.64
SORT1-203ENST00000471996 TMEM191AQ9H0A3 160 aa11.05□□□□□ -0.64
SORT1-203ENST00000471996 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
SORT1-203ENST00000471996 NDUFC2-KCTD14E9PQ53 114 aa11.03□□□□□ -0.64
SORT1-203ENST00000471996 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
SORT1-203ENST00000471996 RAB4AP20338 218 aa11.02□□□□□ -0.65
SORT1-203ENST00000471996 RPL23P62829 140 aaKnown RBP11.02□□□□□ -0.65
SORT1-203ENST00000471996 RIGQ13278 110 aa11.02□□□□□ -0.65
SORT1-203ENST00000471996 NAT8Q9UHE5 227 aa11.02□□□□□ -0.65
SORT1-203ENST00000471996 V9GYV3 84 aa11.02□□□□□ -0.65
SORT1-203ENST00000471996 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
SORT1-203ENST00000471996 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
SORT1-203ENST00000471996 RPL28P46779 137 aaKnown RBP11□□□□□ -0.65
SORT1-203ENST00000471996 KRTAP13-2Q52LG2 175 aa11□□□□□ -0.65
SORT1-203ENST00000471996 LINC00173Q6ZV60 143 aa11□□□□□ -0.65
SORT1-203ENST00000471996 TMEM18Q96B42 140 aa11□□□□□ -0.65
SORT1-203ENST00000471996 KIR2DL4Q99706 377 aa11□□□□□ -0.65
SORT1-203ENST00000471996 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
SORT1-203ENST00000471996 PPP1R17O96001 155 aa10.99□□□□□ -0.65
SORT1-203ENST00000471996 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
SORT1-203ENST00000471996 ANAPC11Q9NYG5 84 aa10.99□□□□□ -0.65
SORT1-203ENST00000471996 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
SORT1-203ENST00000471996 SUMO2P61956 95 aaKnown RBP10.98□□□□□ -0.65
SORT1-203ENST00000471996 ADIRFQ15847 76 aa10.98□□□□□ -0.65
SORT1-203ENST00000471996 AMN1Q8IY45 258 aa10.98□□□□□ -0.65
SORT1-203ENST00000471996 LINC00304Q8N9R0 145 aa10.98□□□□□ -0.65
SORT1-203ENST00000471996 A0A1B0GW15 77 aa10.97□□□□□ -0.65
SORT1-203ENST00000471996 C9JQL5 133 aa10.97□□□□□ -0.65
SORT1-203ENST00000471996 SMKR1H3BMG3 65 aa10.97□□□□□ -0.65
SORT1-203ENST00000471996 LBHQ53QV2 105 aaPredicted RBP10.97□□□□□ -0.65
SORT1-203ENST00000471996 SMIM27A0A1W2PRY6 76 aa10.96□□□□□ -0.65
SORT1-203ENST00000471996 BCE1O60756 84 aa10.96□□□□□ -0.65
SORT1-203ENST00000471996 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
SORT1-203ENST00000471996 NRACQ8N912 160 aa10.96□□□□□ -0.65
SORT1-203ENST00000471996 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
SORT1-203ENST00000471996 SRSF3P84103 164 aaKnown RBP10.95□□□□□ -0.66
SORT1-203ENST00000471996 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
SORT1-203ENST00000471996 RPL39P62891 51 aaKnown RBP10.94□□□□□ -0.66
SORT1-203ENST00000471996 TGIF2-C20orf24A0A0A6YYL0 155 aa10.93□□□□□ -0.66
SORT1-203ENST00000471996 LINC00862A6NCI5 91 aa10.93□□□□□ -0.66
SORT1-203ENST00000471996 PPP1R2P9O14990 202 aa10.93□□□□□ -0.66
SORT1-203ENST00000471996 CTAG1AP78358 180 aa10.93□□□□□ -0.66
SORT1-203ENST00000471996 MRPS36P82909 103 aaKnown RBP10.93□□□□□ -0.66
SORT1-203ENST00000471996 LINC00242Q5T6M2 205 aa10.93□□□□□ -0.66
SORT1-203ENST00000471996 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
SORT1-203ENST00000471996 S100A8P05109 93 aa10.92□□□□□ -0.66
SORT1-203ENST00000471996 HBBP68871 147 aa10.92□□□□□ -0.66
SORT1-203ENST00000471996 FAM104BQ5XKR9 115 aa10.92□□□□□ -0.66
SORT1-203ENST00000471996 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
SORT1-203ENST00000471996 RAB14P61106 215 aa10.91□□□□□ -0.66
SORT1-203ENST00000471996 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
SORT1-203ENST00000471996 ASB16-AS1Q495Z4 193 aa10.9□□□□□ -0.66
SORT1-203ENST00000471996 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.66
SORT1-203ENST00000471996 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
SORT1-203ENST00000471996 TCAPO15273 167 aa10.89□□□□□ -0.67
SORT1-203ENST00000471996 MRPL55Q7Z7F7 128 aaKnown RBP10.89□□□□□ -0.67
SORT1-203ENST00000471996 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
SORT1-203ENST00000471996 XAGE1AQ9HD64 81 aa10.89□□□□□ -0.67
SORT1-203ENST00000471996 TRBV24-1A0A075B6N3 115 aa10.88□□□□□ -0.67
SORT1-203ENST00000471996 F8W036 122 aa10.88□□□□□ -0.67
SORT1-203ENST00000471996 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
SORT1-203ENST00000471996 KRTAP4-1Q9BYQ7 146 aa10.88□□□□□ -0.67
SORT1-203ENST00000471996 CKS2P33552 79 aa10.87□□□□□ -0.67
SORT1-203ENST00000471996 RPL32P62910 135 aaKnown RBP10.87□□□□□ -0.67
SORT1-203ENST00000471996 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
SORT1-203ENST00000471996 IGKV2D-26A0A0A0MRZ7 120 aa10.86□□□□□ -0.67
SORT1-203ENST00000471996 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
SORT1-203ENST00000471996 A0A1B0GXF2 115 aa10.85□□□□□ -0.67
SORT1-203ENST00000471996 PPBPP02775 128 aa10.85□□□□□ -0.67
SORT1-203ENST00000471996 KRTAP13-1Q8IUC0 172 aa10.85□□□□□ -0.67
SORT1-203ENST00000471996 LINC01561Q8N1V8 128 aa10.84□□□□□ -0.67
SORT1-203ENST00000471996 LINC00337Q8N6G1 96 aa10.84□□□□□ -0.67
SORT1-203ENST00000471996 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms