RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 LINC01619G3V211 115 aa7.87□□□□□ -1.15
CHD3-208ENST00000470531 SLPIP03973 132 aa7.87□□□□□ -1.15
CHD3-208ENST00000470531 UBE2D3P61077 147 aa7.87□□□□□ -1.15
CHD3-208ENST00000470531 UBE2D2P62837 147 aa7.87□□□□□ -1.15
CHD3-208ENST00000470531 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
CHD3-208ENST00000470531 NIPBLQ6KC79 2804 aaeCLIP7.86□□□□□ -1.153e-6■□□□□ 9.5
CHD3-208ENST00000470531 LGALS9O00182 355 aa7.86□□□□□ -1.15
CHD3-208ENST00000470531 WIPF1O43516 503 aa7.86□□□□□ -1.15
CHD3-208ENST00000470531 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
CHD3-208ENST00000470531 K7EQG2 157 aa7.86□□□□□ -1.15
CHD3-208ENST00000470531 BAALC-AS2P0C853 105 aa7.86□□□□□ -1.15
CHD3-208ENST00000470531 A0A1B0GX51 115 aa7.85□□□□□ -1.15
CHD3-208ENST00000470531 RHOHQ15669 191 aa7.85□□□□□ -1.15
CHD3-208ENST00000470531 HELZ2Q9BYK8 2649 aaKnown RBP7.85□□□□□ -1.15
CHD3-208ENST00000470531 IGHV4-4A0A075B6R2 117 aa7.84□□□□□ -1.15
CHD3-208ENST00000470531 TRBV27A0A0K0K1C4 114 aa7.84□□□□□ -1.15
CHD3-208ENST00000470531 KRTAP10-9P60411 292 aa7.84□□□□□ -1.15
CHD3-208ENST00000470531 IGHV1-58A0A0C4DH39 117 aa7.84□□□□□ -1.15
CHD3-208ENST00000470531 KLLNB2CW77 178 aa7.84□□□□□ -1.15
CHD3-208ENST00000470531 MALP21145 153 aa7.83□□□□□ -1.16
CHD3-208ENST00000470531 Q6Q795 121 aa7.83□□□□□ -1.16
CHD3-208ENST00000470531 LINC00526Q96FQ7 95 aa7.83□□□□□ -1.16
CHD3-208ENST00000470531 UNC79Q9P2D8 2635 aa7.83□□□□□ -1.16
CHD3-208ENST00000470531 MIR7-3HGQ8N6C7 128 aa7.83□□□□□ -1.16
CHD3-208ENST00000470531 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
CHD3-208ENST00000470531 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
CHD3-208ENST00000470531 VSIG2Q96IQ7 327 aa7.82□□□□□ -1.16
CHD3-208ENST00000470531 MAST4O15021 2626 aa7.82□□□□□ -1.16
CHD3-208ENST00000470531 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
CHD3-208ENST00000470531 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
CHD3-208ENST00000470531 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
CHD3-208ENST00000470531 COX6A2Q02221 97 aa7.82□□□□□ -1.16
CHD3-208ENST00000470531 TMEM243Q9BU79 118 aa7.82□□□□□ -1.16
CHD3-208ENST00000470531 SOCS3O14543 225 aa7.81□□□□□ -1.16
CHD3-208ENST00000470531 PSMB8P28062 276 aa7.81□□□□□ -1.16
CHD3-208ENST00000470531 MAP6D1Q9H9H5 199 aa7.81□□□□□ -1.16
CHD3-208ENST00000470531 MXRA5Q9NR99 2828 aa7.81□□□□□ -1.16
CHD3-208ENST00000470531 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
CHD3-208ENST00000470531 LINC00315P59091 139 aa7.81□□□□□ -1.16
CHD3-208ENST00000470531 CCL24O00175 119 aa7.8□□□□□ -1.16
CHD3-208ENST00000470531 SND1-IT1Q9HBX3 110 aa7.8□□□□□ -1.16
CHD3-208ENST00000470531 C14orf132Q9NPU4 83 aa7.8□□□□□ -1.16
CHD3-208ENST00000470531 TMEM263Q8WUH6 116 aaKnown RBP7.8□□□□□ -1.16
CHD3-208ENST00000470531 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
CHD3-208ENST00000470531 LECT2O14960 151 aa7.79□□□□□ -1.16
CHD3-208ENST00000470531 COX7CP15954 63 aa7.79□□□□□ -1.16
CHD3-208ENST00000470531 KIF25-AS1Q9Y6Z4 181 aa7.79□□□□□ -1.16
CHD3-208ENST00000470531 K7EMT4 169 aa7.79□□□□□ -1.16
CHD3-208ENST00000470531 DAZ2Q13117 558 aaKnown RBP7.79□□□□□ -1.16
CHD3-208ENST00000470531 MIAQ16674 131 aa7.79□□□□□ -1.16
CHD3-208ENST00000470531 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
CHD3-208ENST00000470531 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
CHD3-208ENST00000470531 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 H7C423 109 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 ATOX1O00244 68 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 ANGP03950 147 aaKnown RBP7.78□□□□□ -1.16
CHD3-208ENST00000470531 SDIM1Q6ZPB5 146 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 IL17DQ8TAD2 202 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
CHD3-208ENST00000470531 H3BUA1 57 aa7.78□□□□□ -1.16
CHD3-208ENST00000470531 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
CHD3-208ENST00000470531 RBM3P98179 157 aaKnown RBP7.77□□□□□ -1.17
CHD3-208ENST00000470531 SPANXCQ9NY87 97 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 PYGO1Q9Y3Y4 419 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 ITPR2Q14571 2701 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 IGLV1-40P01703 118 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 TMEM258P61165 79 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
CHD3-208ENST00000470531 RBMY1BA6NDE4 496 aaKnown RBP7.76□□□□□ -1.17
CHD3-208ENST00000470531 RBMY1EA6NEQ0 496 aaKnown RBP7.76□□□□□ -1.17
CHD3-208ENST00000470531 RBMY1DP0C7P1 496 aaKnown RBP7.76□□□□□ -1.17
CHD3-208ENST00000470531 MED14OSP0DP75 135 aa7.76□□□□□ -1.17
CHD3-208ENST00000470531 AMELXQ99217 191 aa7.76□□□□□ -1.17
CHD3-208ENST00000470531 GYPEP15421 78 aa7.76□□□□□ -1.17
CHD3-208ENST00000470531 LINC00336Q6ZUF6 198 aa7.76□□□□□ -1.17
CHD3-208ENST00000470531 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
CHD3-208ENST00000470531 UBE2D4Q9Y2X8 147 aa7.76□□□□□ -1.17
CHD3-208ENST00000470531 HAMPP81172 84 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 Q8N2B8 174 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 DPH3Q96FX2 82 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 K7EQD1 137 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 NCR3O14931 201 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 NDUFC2O95298 119 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 WFDC9Q8NEX5 89 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 LINC00482Q8N8I6 264 aa7.75□□□□□ -1.17
CHD3-208ENST00000470531 DEFB114Q30KQ6 69 aa7.74□□□□□ -1.17
CHD3-208ENST00000470531 A0A0B4J2C4 111 aa7.74□□□□□ -1.17
CHD3-208ENST00000470531 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
CHD3-208ENST00000470531 SBSPONQ8IVN8 264 aa7.74□□□□□ -1.17
CHD3-208ENST00000470531 HIVEP1P15822 2718 aa7.73□□□□□ -1.17
CHD3-208ENST00000470531 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
CHD3-208ENST00000470531 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
CHD3-208ENST00000470531 DEFB135Q30KP9 77 aa7.73□□□□□ -1.17
CHD3-208ENST00000470531 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
CHD3-208ENST00000470531 ZNF702PQ9H963 129 aa7.73□□□□□ -1.17
CHD3-208ENST00000470531 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
CHD3-208ENST00000470531 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
CHD3-208ENST00000470531 A0A087WVE0 104 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms