RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 UNQ6190/PRO20217Q6UXQ8 127 aa12.43□□□□□ -0.42
CPSF7-209ENST00000463244 TCTE3Q8IZS6 198 aa12.43□□□□□ -0.42
CPSF7-209ENST00000463244 SMDT1Q9H4I9 107 aa12.43□□□□□ -0.42
CPSF7-209ENST00000463244 UBE2D1P51668 147 aa12.42□□□□□ -0.42
CPSF7-209ENST00000463244 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
CPSF7-209ENST00000463244 GAGE2EQ4V326 116 aa12.42□□□□□ -0.42
CPSF7-209ENST00000463244 GAGE2DQ9UEU5 116 aa12.42□□□□□ -0.42
CPSF7-209ENST00000463244 RPL13AP40429 203 aaKnown RBP12.41□□□□□ -0.42
CPSF7-209ENST00000463244 BLOC1S1P78537 153 aa12.41□□□□□ -0.42
CPSF7-209ENST00000463244 MRPL51Q4U2R6 128 aaKnown RBP12.41□□□□□ -0.42
CPSF7-209ENST00000463244 M0QXV9 152 aa12.4□□□□□ -0.42
CPSF7-209ENST00000463244 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
CPSF7-209ENST00000463244 C20orf78Q9BR46 151 aa12.4□□□□□ -0.42
CPSF7-209ENST00000463244 KRTAP9-2Q9BYQ4 174 aa12.4□□□□□ -0.42
CPSF7-209ENST00000463244 V9GYV3 84 aa12.4□□□□□ -0.42
CPSF7-209ENST00000463244 TRBV24-1A0A075B6N3 115 aa12.39□□□□□ -0.43
CPSF7-209ENST00000463244 A0A0U1RQV1 116 aa12.39□□□□□ -0.43
CPSF7-209ENST00000463244 RPL32P62910 135 aaKnown RBP12.39□□□□□ -0.43
CPSF7-209ENST00000463244 UBE2BP63146 152 aa12.39□□□□□ -0.43
CPSF7-209ENST00000463244 TCAPO15273 167 aa12.38□□□□□ -0.43
CPSF7-209ENST00000463244 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
CPSF7-209ENST00000463244 SPANXA1Q9NS26 97 aa12.38□□□□□ -0.43
CPSF7-209ENST00000463244 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
CPSF7-209ENST00000463244 ZNF727A8MUV8 499 aa12.37□□□□□ -0.43
CPSF7-209ENST00000463244 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
CPSF7-209ENST00000463244 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
CPSF7-209ENST00000463244 NAT8BQ9UHF3 227 aa12.37□□□□□ -0.43
CPSF7-209ENST00000463244 FAT4Q6V0I7 4981 aa12.37□□□□□ -0.43
CPSF7-209ENST00000463244 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
CPSF7-209ENST00000463244 HBBP68871 147 aa12.36□□□□□ -0.43
CPSF7-209ENST00000463244 CARHSP1Q9Y2V2 147 aaKnown RBP12.36□□□□□ -0.43
CPSF7-209ENST00000463244 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
CPSF7-209ENST00000463244 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
CPSF7-209ENST00000463244 TNFRSF6BO95407 300 aa12.34□□□□□ -0.43
CPSF7-209ENST00000463244 CKS2P33552 79 aa12.34□□□□□ -0.43
CPSF7-209ENST00000463244 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
CPSF7-209ENST00000463244 TGIF2-C20orf24A0A0A6YYL0 155 aa12.33□□□□□ -0.44
CPSF7-209ENST00000463244 NDUFC2-KCTD14E9PQ53 114 aa12.33□□□□□ -0.44
CPSF7-209ENST00000463244 C9orf129Q5T035 196 aaKnown RBP12.33□□□□□ -0.44
CPSF7-209ENST00000463244 FAM74A3Q4VXF1 159 aa12.32□□□□□ -0.44
CPSF7-209ENST00000463244 ZNF861PO60384 105 aa12.31□□□□□ -0.44
CPSF7-209ENST00000463244 SRP19P09132 144 aaKnown RBP12.31□□□□□ -0.44
CPSF7-209ENST00000463244 C2orf82Q6UX34 121 aa12.31□□□□□ -0.44
CPSF7-209ENST00000463244 A0A1B0GW15 77 aa12.29□□□□□ -0.44
CPSF7-209ENST00000463244 SMIM27A0A1W2PRY6 76 aa12.29□□□□□ -0.44
CPSF7-209ENST00000463244 D6R8Y8 96 aa12.29□□□□□ -0.44
CPSF7-209ENST00000463244 LINC00242Q5T6M2 205 aa12.29□□□□□ -0.44
CPSF7-209ENST00000463244 PACRGQ96M98 296 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-209ENST00000463244 TSPAN13O95857 204 aa12.27□□□□□ -0.45
CPSF7-209ENST00000463244 NPYP01303 97 aa12.27□□□□□ -0.45
CPSF7-209ENST00000463244 IFI27P40305 119 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-209ENST00000463244 RPL23P62829 140 aaKnown RBP12.27□□□□□ -0.45
CPSF7-209ENST00000463244 LCE2AQ5TA79 106 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-209ENST00000463244 NUPR1O60356 82 aa12.26□□□□□ -0.45
CPSF7-209ENST00000463244 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
CPSF7-209ENST00000463244 IGLV4-3A0A075B6K6 122 aa12.25□□□□□ -0.45
CPSF7-209ENST00000463244 ADIRFQ15847 76 aa12.24□□□□□ -0.45
CPSF7-209ENST00000463244 LINC01561Q8N1V8 128 aa12.24□□□□□ -0.45
CPSF7-209ENST00000463244 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
CPSF7-209ENST00000463244 C22orf24Q9Y442 160 aa12.23□□□□□ -0.45
CPSF7-209ENST00000463244 MUC17Q685J3 4493 aa12.23□□□□□ -0.45
CPSF7-209ENST00000463244 A0A087X002 238 aa12.22□□□□□ -0.45
CPSF7-209ENST00000463244 F8W036 122 aa12.22□□□□□ -0.45
CPSF7-209ENST00000463244 PPBPP02775 128 aa12.22□□□□□ -0.45
CPSF7-209ENST00000463244 MRPL54Q6P161 138 aaKnown RBP12.22□□□□□ -0.45
CPSF7-209ENST00000463244 S100A8P05109 93 aa12.21□□□□□ -0.45
CPSF7-209ENST00000463244 RAB5AP20339 215 aa12.21□□□□□ -0.45
CPSF7-209ENST00000463244 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.45
CPSF7-209ENST00000463244 A0A1B0GXF2 115 aa12.2□□□□□ -0.46
CPSF7-209ENST00000463244 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
CPSF7-209ENST00000463244 LINC00469Q8N7U9 141 aa12.2□□□□□ -0.46
CPSF7-209ENST00000463244 NAT8Q9UHE5 227 aa12.2□□□□□ -0.46
CPSF7-209ENST00000463244 LBHQ53QV2 105 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-209ENST00000463244 PRSS2P07478 247 aa12.18□□□□□ -0.46
CPSF7-209ENST00000463244 ORMDL3Q8N138 153 aa12.18□□□□□ -0.46
CPSF7-209ENST00000463244 XAGE1AQ9HD64 81 aa12.18□□□□□ -0.46
CPSF7-209ENST00000463244 CRYGAP11844 174 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 RPL28P46779 137 aaKnown RBP12.17□□□□□ -0.46
CPSF7-209ENST00000463244 CKS1BP61024 79 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 Q6ZN92 141 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 AKAP14Q86UN6 197 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
CPSF7-209ENST00000463244 C9JQL5 133 aa12.16□□□□□ -0.46
CPSF7-209ENST00000463244 ZC2HC1BQ5TFG8 222 aa12.16□□□□□ -0.46
CPSF7-209ENST00000463244 TMEM136Q6ZRR5 245 aa12.16□□□□□ -0.46
CPSF7-209ENST00000463244 LINC00173Q6ZV60 143 aa12.16□□□□□ -0.46
CPSF7-209ENST00000463244 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
CPSF7-209ENST00000463244 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
CPSF7-209ENST00000463244 BCE1O60756 84 aa12.15□□□□□ -0.46
CPSF7-209ENST00000463244 C6orf226Q5I0X4 101 aa12.15□□□□□ -0.46
CPSF7-209ENST00000463244 MRPL55Q7Z7F7 128 aaKnown RBP12.15□□□□□ -0.46
CPSF7-209ENST00000463244 Q8IZM0 81 aa12.15□□□□□ -0.46
CPSF7-209ENST00000463244 AMELXQ99217 191 aa12.15□□□□□ -0.46
CPSF7-209ENST00000463244 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
CPSF7-209ENST00000463244 KRTAP9-6A0A140TA67 174 aa12.12□□□□□ -0.47
CPSF7-209ENST00000463244 ALKBH7Q9BT30 221 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-209ENST00000463244 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
CPSF7-209ENST00000463244 ATP5L2Q7Z4Y8 100 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms