RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
LINC00960-201ENST00000463183 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
LINC00960-201ENST00000463183 CARD19Q96LW7 228 aa11.45□□□□□ -0.58
LINC00960-201ENST00000463183 COLCA2A8K830 154 aa11.44□□□□□ -0.58
LINC00960-201ENST00000463183 MAP1LC3AQ9H492 121 aa11.44□□□□□ -0.58
LINC00960-201ENST00000463183 SPANXA1Q9NS26 97 aa11.44□□□□□ -0.58
LINC00960-201ENST00000463183 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
LINC00960-201ENST00000463183 MT-ND6P03923 174 aa11.43□□□□□ -0.58
LINC00960-201ENST00000463183 KRTAP10-4P60372 401 aaPredicted RBP11.43□□□□□ -0.58
LINC00960-201ENST00000463183 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
LINC00960-201ENST00000463183 IGLV4-69A0A075B6H9 119 aa11.42□□□□□ -0.58
LINC00960-201ENST00000463183 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
LINC00960-201ENST00000463183 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
LINC00960-201ENST00000463183 A0A096LNI7 61 aa11.41□□□□□ -0.58
LINC00960-201ENST00000463183 IFI27P40305 119 aaPredicted RBP11.41□□□□□ -0.58
LINC00960-201ENST00000463183 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
LINC00960-201ENST00000463183 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
LINC00960-201ENST00000463183 APOMO95445 188 aa11.39□□□□□ -0.59
LINC00960-201ENST00000463183 KIAA1644Q3SXP7 199 aa11.39□□□□□ -0.59
LINC00960-201ENST00000463183 STPG4Q8N801 248 aa11.39□□□□□ -0.59
LINC00960-201ENST00000463183 CAMK2N2Q96S95 79 aa11.39□□□□□ -0.59
LINC00960-201ENST00000463183 MRPL18Q9H0U6 180 aaKnown RBP11.39□□□□□ -0.59
LINC00960-201ENST00000463183 TRAPPC1Q9Y5R8 145 aa11.39□□□□□ -0.59
LINC00960-201ENST00000463183 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
LINC00960-201ENST00000463183 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
LINC00960-201ENST00000463183 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
LINC00960-201ENST00000463183 Q6ZRU5 148 aa11.38□□□□□ -0.59
LINC00960-201ENST00000463183 Q8N8P6 123 aa11.38□□□□□ -0.59
LINC00960-201ENST00000463183 FAT3Q8TDW7 4589 aa11.38□□□□□ -0.59
LINC00960-201ENST00000463183 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
LINC00960-201ENST00000463183 FABP9Q0Z7S8 132 aa11.37□□□□□ -0.59
LINC00960-201ENST00000463183 ORAOV1Q8WV07 137 aa11.37□□□□□ -0.59
LINC00960-201ENST00000463183 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
LINC00960-201ENST00000463183 IGLV4-3A0A075B6K6 122 aa11.36□□□□□ -0.59
LINC00960-201ENST00000463183 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
LINC00960-201ENST00000463183 C2orf66Q6UXQ4 117 aa11.36□□□□□ -0.59
LINC00960-201ENST00000463183 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
LINC00960-201ENST00000463183 CYSLTR1Q9Y271 337 aa11.36□□□□□ -0.59
LINC00960-201ENST00000463183 PKHD1L1Q86WI1 4243 aa11.36□□□□□ -0.59
LINC00960-201ENST00000463183 ZC2HC1BQ5TFG8 222 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 TMEM141Q96I45 108 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 PKIGQ9Y2B9 76 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 A0A0J9YXV3 536 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 ORMDL2Q53FV1 153 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
LINC00960-201ENST00000463183 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
LINC00960-201ENST00000463183 PYGO1Q9Y3Y4 419 aa11.34□□□□□ -0.59
LINC00960-201ENST00000463183 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
LINC00960-201ENST00000463183 LOC107984640A0A0U1RRK4 108 aa11.33□□□□□ -0.6
LINC00960-201ENST00000463183 KRTAP29-1A8MX34 341 aaPredicted RBP11.33□□□□□ -0.6
LINC00960-201ENST00000463183 Q6ZN92 141 aa11.33□□□□□ -0.6
LINC00960-201ENST00000463183 C2orf48Q96LS8 159 aa11.33□□□□□ -0.6
LINC00960-201ENST00000463183 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
LINC00960-201ENST00000463183 NXT2Q9NPJ8 142 aaKnown RBP11.33□□□□□ -0.6
LINC00960-201ENST00000463183 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
LINC00960-201ENST00000463183 TRGC2P03986 189 aa11.32□□□□□ -0.6
LINC00960-201ENST00000463183 OR10D4PQ8NGN7 298 aa11.32□□□□□ -0.6
LINC00960-201ENST00000463183 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
LINC00960-201ENST00000463183 LINC00242Q5T6M2 205 aa11.31□□□□□ -0.6
LINC00960-201ENST00000463183 VCX2Q9H322 139 aa11.31□□□□□ -0.6
LINC00960-201ENST00000463183 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
LINC00960-201ENST00000463183 UBE2D1P51668 147 aa11.29□□□□□ -0.6
LINC00960-201ENST00000463183 NDUFA1O15239 70 aa11.28□□□□□ -0.6
LINC00960-201ENST00000463183 A0A087WZ39 114 aa11.27□□□□□ -0.61
LINC00960-201ENST00000463183 K7EMI3 77 aa11.27□□□□□ -0.61
LINC00960-201ENST00000463183 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
LINC00960-201ENST00000463183 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.61
LINC00960-201ENST00000463183 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
LINC00960-201ENST00000463183 C18orf32Q8TCD1 76 aa11.27□□□□□ -0.61
LINC00960-201ENST00000463183 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
LINC00960-201ENST00000463183 OXTP01178 125 aa11.26□□□□□ -0.61
LINC00960-201ENST00000463183 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
LINC00960-201ENST00000463183 AMELXQ99217 191 aa11.25□□□□□ -0.61
LINC00960-201ENST00000463183 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
LINC00960-201ENST00000463183 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
LINC00960-201ENST00000463183 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
LINC00960-201ENST00000463183 G0S2P27469 103 aa11.24□□□□□ -0.61
LINC00960-201ENST00000463183 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
LINC00960-201ENST00000463183 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
LINC00960-201ENST00000463183 SCGB3A1Q96QR1 104 aa11.24□□□□□ -0.61
LINC00960-201ENST00000463183 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
LINC00960-201ENST00000463183 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
LINC00960-201ENST00000463183 LCE2DQ5TA82 110 aaPredicted RBP11.23□□□□□ -0.61
LINC00960-201ENST00000463183 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
LINC00960-201ENST00000463183 TOMM6Q96B49 74 aa11.23□□□□□ -0.61
LINC00960-201ENST00000463183 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
LINC00960-201ENST00000463183 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
LINC00960-201ENST00000463183 KIAA0087Q14695 138 aa11.22□□□□□ -0.61
LINC00960-201ENST00000463183 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
LINC00960-201ENST00000463183 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
LINC00960-201ENST00000463183 FA2HQ7L5A8 372 aa11.22□□□□□ -0.61
LINC00960-201ENST00000463183 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
LINC00960-201ENST00000463183 PRSS2P07478 247 aa11.21□□□□□ -0.61
LINC00960-201ENST00000463183 LINC00614P0C842 121 aa11.21□□□□□ -0.61
LINC00960-201ENST00000463183 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
LINC00960-201ENST00000463183 F8WDY8 70 aa11.2□□□□□ -0.62
LINC00960-201ENST00000463183 NPSP0C0P6 89 aa11.2□□□□□ -0.62
LINC00960-201ENST00000463183 PACRGQ96M98 296 aaPredicted RBP11.2□□□□□ -0.62
LINC00960-201ENST00000463183 HIST1H2BKO60814 126 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms