RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SS18L2Q9UHA2 77 aa10.21□□□□□ -0.78
HDAC6-213ENST00000462730 SMCPP49901 116 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-213ENST00000462730 SFTA2Q6UW10 78 aa10.2□□□□□ -0.78
HDAC6-213ENST00000462730 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
HDAC6-213ENST00000462730 CDIP1Q9H305 208 aa10.2□□□□□ -0.78
HDAC6-213ENST00000462730 SPINK8P0C7L1 97 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 PSMB2P49721 201 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 Q8NAQ8 132 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 IGHV3-30P01768 117 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 IGHV3-30-5P0DP03 117 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 MIFP14174 115 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-213ENST00000462730 MRPS36P82909 103 aaKnown RBP10.19□□□□□ -0.78
HDAC6-213ENST00000462730 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
HDAC6-213ENST00000462730 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
HDAC6-213ENST00000462730 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
HDAC6-213ENST00000462730 J3QQQ9 107 aa10.17□□□□□ -0.78
HDAC6-213ENST00000462730 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
HDAC6-213ENST00000462730 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
HDAC6-213ENST00000462730 CFC1P0CG37 223 aa10.17□□□□□ -0.78
HDAC6-213ENST00000462730 UBE2L6O14933 153 aa10.16□□□□□ -0.78
HDAC6-213ENST00000462730 GYPEP15421 78 aa10.16□□□□□ -0.78
HDAC6-213ENST00000462730 DAD1P61803 113 aa10.16□□□□□ -0.78
HDAC6-213ENST00000462730 CELA1Q9UNI1 258 aa10.16□□□□□ -0.78
HDAC6-213ENST00000462730 LGALS3P17931 250 aaKnown RBP10.15□□□□□ -0.78
HDAC6-213ENST00000462730 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.78
HDAC6-213ENST00000462730 RETNQ9HD89 108 aa10.15□□□□□ -0.78
HDAC6-213ENST00000462730 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
HDAC6-213ENST00000462730 TCL1BO95988 128 aa10.15□□□□□ -0.78
HDAC6-213ENST00000462730 PRB2P02812 416 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-213ENST00000462730 PRO0255Q9UI72 69 aa10.15□□□□□ -0.78
HDAC6-213ENST00000462730 NOTCH1P46531 2555 aa10.14□□□□□ -0.79
HDAC6-213ENST00000462730 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
HDAC6-213ENST00000462730 LEPROTO15243 131 aa10.14□□□□□ -0.79
HDAC6-213ENST00000462730 PRO1854Q9UHT4 67 aa10.14□□□□□ -0.79
HDAC6-213ENST00000462730 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
HDAC6-213ENST00000462730 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
HDAC6-213ENST00000462730 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 PAX4O43316 350 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 SPART-AS1P0CW21 52 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 Q6Q795 121 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 TMEM101Q96IK0 257 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 H7C423 109 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 SCGB1C2P0DMR2 95 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 ANAPC13Q9BS18 74 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
HDAC6-213ENST00000462730 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-213ENST00000462730 ATP5G1P05496 136 aa10.11□□□□□ -0.79
HDAC6-213ENST00000462730 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
HDAC6-213ENST00000462730 A4D1N5 150 aa10.1□□□□□ -0.79
HDAC6-213ENST00000462730 MT-ATP8P03928 68 aa10.1□□□□□ -0.79
HDAC6-213ENST00000462730 XGP55808 180 aa10.1□□□□□ -0.79
HDAC6-213ENST00000462730 CARD19Q96LW7 228 aa10.1□□□□□ -0.79
HDAC6-213ENST00000462730 NBEAL1Q6ZS30 2694 aa10.1□□□□□ -0.79
HDAC6-213ENST00000462730 TIRAPP58753 221 aa10.1□□□□□ -0.79
HDAC6-213ENST00000462730 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
HDAC6-213ENST00000462730 KPRPQ5T749 579 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-213ENST00000462730 A0A096LPF7 62 aa10.09□□□□□ -0.79
HDAC6-213ENST00000462730 TRAV13-1A0A0B4J241 112 aa10.09□□□□□ -0.79
HDAC6-213ENST00000462730 K7EIL1 84 aa10.09□□□□□ -0.79
HDAC6-213ENST00000462730 VSIG2Q96IQ7 327 aa10.09□□□□□ -0.79
HDAC6-213ENST00000462730 TRAV8-3A0A0A6YYJ7 113 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 F5H768 121 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 EIF4EBP3O60516 100 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-213ENST00000462730 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 HTN3P15516 51 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 COX6A2Q02221 97 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
HDAC6-213ENST00000462730 B5MCH6 92 aa10.07□□□□□ -0.8
HDAC6-213ENST00000462730 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
HDAC6-213ENST00000462730 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
HDAC6-213ENST00000462730 HERVK_113P63121 156 aa10.07□□□□□ -0.8
HDAC6-213ENST00000462730 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
HDAC6-213ENST00000462730 ANKRD29Q8N6D5 301 aa10.07□□□□□ -0.8
HDAC6-213ENST00000462730 SLC25A20O43772 301 aa10.06□□□□□ -0.8
HDAC6-213ENST00000462730 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
HDAC6-213ENST00000462730 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
HDAC6-213ENST00000462730 IGLV4-60A0A075B6I1 120 aa10.06□□□□□ -0.8
HDAC6-213ENST00000462730 C11orf68Q9H3H3 251 aaKnown RBP10.05□□□□□ -0.8
HDAC6-213ENST00000462730 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
HDAC6-213ENST00000462730 SNCGO76070 127 aa10.05□□□□□ -0.8
HDAC6-213ENST00000462730 C9JAW5 83 aa10.04□□□□□ -0.8
HDAC6-213ENST00000462730 H7C2G1 150 aa10.04□□□□□ -0.8
HDAC6-213ENST00000462730 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
HDAC6-213ENST00000462730 GAGE2EQ4V326 116 aa10.04□□□□□ -0.8
HDAC6-213ENST00000462730 DEFB121Q5J5C9 76 aa10.04□□□□□ -0.8
HDAC6-213ENST00000462730 GAGE2DQ9UEU5 116 aa10.04□□□□□ -0.8
HDAC6-213ENST00000462730 IGKV3OR2-268A0A0C4DH90 116 aa10.03□□□□□ -0.8
HDAC6-213ENST00000462730 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
HDAC6-213ENST00000462730 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
HDAC6-213ENST00000462730 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
HDAC6-213ENST00000462730 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms