RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 CRYGAP11844 174 aa6.86□□□□□ -1.31
HCFC1-204ENST00000461098 NRACQ8N912 160 aa6.86□□□□□ -1.31
HCFC1-204ENST00000461098 ANAPC11Q9NYG5 84 aa6.86□□□□□ -1.31
HCFC1-204ENST00000461098 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
HCFC1-204ENST00000461098 NUPR1O60356 82 aa6.85□□□□□ -1.31
HCFC1-204ENST00000461098 FCER1GP30273 86 aa6.85□□□□□ -1.31
HCFC1-204ENST00000461098 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
HCFC1-204ENST00000461098 CTDSP1Q9GZU7 261 aa6.85□□□□□ -1.31
HCFC1-204ENST00000461098 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
HCFC1-204ENST00000461098 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
HCFC1-204ENST00000461098 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
HCFC1-204ENST00000461098 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
HCFC1-204ENST00000461098 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
HCFC1-204ENST00000461098 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
HCFC1-204ENST00000461098 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
HCFC1-204ENST00000461098 TRBV30A0A0K0K1B3 111 aa6.83□□□□□ -1.32
HCFC1-204ENST00000461098 KANTRA0A1W2PQU2 76 aa6.83□□□□□ -1.32
HCFC1-204ENST00000461098 A8MWL6 223 aa6.83□□□□□ -1.32
HCFC1-204ENST00000461098 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
HCFC1-204ENST00000461098 SUMO2P61956 95 aaKnown RBP6.83□□□□□ -1.32
HCFC1-204ENST00000461098 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
HCFC1-204ENST00000461098 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
HCFC1-204ENST00000461098 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
HCFC1-204ENST00000461098 A0A1B0GUT8 65 aa6.81□□□□□ -1.32
HCFC1-204ENST00000461098 CT83Q5H943 113 aa6.81□□□□□ -1.32
HCFC1-204ENST00000461098 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
HCFC1-204ENST00000461098 HIGD1CA8MV81 97 aa6.8□□□□□ -1.32
HCFC1-204ENST00000461098 TEX46H3BTG2 121 aa6.8□□□□□ -1.32
HCFC1-204ENST00000461098 BCE1O60756 84 aa6.8□□□□□ -1.32
HCFC1-204ENST00000461098 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
HCFC1-204ENST00000461098 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
HCFC1-204ENST00000461098 MRPS36P82909 103 aaKnown RBP6.8□□□□□ -1.32
HCFC1-204ENST00000461098 RGS21Q2M5E4 152 aa6.8□□□□□ -1.32
HCFC1-204ENST00000461098 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
HCFC1-204ENST00000461098 TMEM18Q96B42 140 aa6.8□□□□□ -1.32
HCFC1-204ENST00000461098 KRTAP13-1Q8IUC0 172 aa6.79□□□□□ -1.32
HCFC1-204ENST00000461098 LINC00469Q8N7U9 141 aa6.79□□□□□ -1.32
HCFC1-204ENST00000461098 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
HCFC1-204ENST00000461098 IFITM10A6NMD0 228 aa6.78□□□□□ -1.32
HCFC1-204ENST00000461098 ZNF727A8MUV8 499 aa6.78□□□□□ -1.32
HCFC1-204ENST00000461098 PPP1R17O96001 155 aa6.78□□□□□ -1.32
HCFC1-204ENST00000461098 HBBP68871 147 aa6.78□□□□□ -1.32
HCFC1-204ENST00000461098 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
HCFC1-204ENST00000461098 SPANXA1Q9NS26 97 aa6.78□□□□□ -1.32
HCFC1-204ENST00000461098 TRBV24-1A0A075B6N3 115 aa6.77□□□□□ -1.33
HCFC1-204ENST00000461098 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
HCFC1-204ENST00000461098 PPP1R2P9O14990 202 aa6.77□□□□□ -1.33
HCFC1-204ENST00000461098 RPL32P62910 135 aaKnown RBP6.77□□□□□ -1.33
HCFC1-204ENST00000461098 SRSF3P84103 164 aaKnown RBP6.77□□□□□ -1.33
HCFC1-204ENST00000461098 ASB16-AS1Q495Z4 193 aa6.77□□□□□ -1.33
HCFC1-204ENST00000461098 MRPL51Q4U2R6 128 aaKnown RBP6.77□□□□□ -1.33
HCFC1-204ENST00000461098 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
HCFC1-204ENST00000461098 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
HCFC1-204ENST00000461098 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
HCFC1-204ENST00000461098 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
HCFC1-204ENST00000461098 TP73-AS1Q9UF72 201 aa6.77□□□□□ -1.33
HCFC1-204ENST00000461098 TAGLN2P37802 199 aaKnown RBP6.76□□□□□ -1.33
HCFC1-204ENST00000461098 CTAG1AP78358 180 aa6.76□□□□□ -1.33
HCFC1-204ENST00000461098 FAM229BQ4G0N7 80 aa6.76□□□□□ -1.33
HCFC1-204ENST00000461098 C20orf78Q9BR46 151 aa6.76□□□□□ -1.33
HCFC1-204ENST00000461098 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
HCFC1-204ENST00000461098 FAM104BQ5XKR9 115 aa6.75□□□□□ -1.33
HCFC1-204ENST00000461098 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
HCFC1-204ENST00000461098 TMEM250H0YL14 139 aa6.74□□□□□ -1.33
HCFC1-204ENST00000461098 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
HCFC1-204ENST00000461098 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
HCFC1-204ENST00000461098 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 LINC00862A6NCI5 91 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 TCAPO15273 167 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 RIGQ13278 110 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 V9GYV3 84 aa6.73□□□□□ -1.33
HCFC1-204ENST00000461098 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
HCFC1-204ENST00000461098 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
HCFC1-204ENST00000461098 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
HCFC1-204ENST00000461098 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
HCFC1-204ENST00000461098 CKS2P33552 79 aa6.7□□□□□ -1.34
HCFC1-204ENST00000461098 ZC2HC1BQ5TFG8 222 aa6.7□□□□□ -1.34
HCFC1-204ENST00000461098 GAGE10A6NGK3 116 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 NPYP01303 97 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
HCFC1-204ENST00000461098 CKS1BP61024 79 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 FP248Q71RG6 208 aaPredicted RBP6.69□□□□□ -1.34
HCFC1-204ENST00000461098 Q8IZM0 81 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 C3orf22Q8N5N4 141 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
HCFC1-204ENST00000461098 D6R8Y8 96 aa6.68□□□□□ -1.34
HCFC1-204ENST00000461098 PRSS2P07478 247 aa6.68□□□□□ -1.34
HCFC1-204ENST00000461098 UBE2AP49459 152 aa6.68□□□□□ -1.34
HCFC1-204ENST00000461098 CEBPGP53567 150 aa6.68□□□□□ -1.34
HCFC1-204ENST00000461098 Q6ZN92 141 aa6.68□□□□□ -1.34
HCFC1-204ENST00000461098 EIF5A2Q9GZV4 153 aaKnown RBP6.68□□□□□ -1.34
HCFC1-204ENST00000461098 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
HCFC1-204ENST00000461098 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
HCFC1-204ENST00000461098 PNRC1Q12796 327 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms