RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
MSH6-206ENST00000455383 PRR4Q16378 134 aa11.17□□□□□ -0.62
MSH6-206ENST00000455383 C20orf78Q9BR46 151 aa11.17□□□□□ -0.62
MSH6-206ENST00000455383 V9GYV3 84 aa11.17□□□□□ -0.62
MSH6-206ENST00000455383 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
MSH6-206ENST00000455383 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
MSH6-206ENST00000455383 CEBPGP53567 150 aa11.16□□□□□ -0.62
MSH6-206ENST00000455383 RPL39P62891 51 aaKnown RBP11.16□□□□□ -0.62
MSH6-206ENST00000455383 BLOC1S1P78537 153 aa11.16□□□□□ -0.62
MSH6-206ENST00000455383 MRPL51Q4U2R6 128 aaKnown RBP11.16□□□□□ -0.62
MSH6-206ENST00000455383 FAM104BQ5XKR9 115 aa11.16□□□□□ -0.62
MSH6-206ENST00000455383 SMIM7Q9BQ49 75 aa11.16□□□□□ -0.62
MSH6-206ENST00000455383 KRTAP9-2Q9BYQ4 174 aa11.16□□□□□ -0.62
MSH6-206ENST00000455383 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
MSH6-206ENST00000455383 KIAA0087Q14695 138 aa11.15□□□□□ -0.62
MSH6-206ENST00000455383 GAGE2EQ4V326 116 aa11.15□□□□□ -0.62
MSH6-206ENST00000455383 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.62
MSH6-206ENST00000455383 GAGE2DQ9UEU5 116 aa11.15□□□□□ -0.62
MSH6-206ENST00000455383 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
MSH6-206ENST00000455383 FAT4Q6V0I7 4981 aa11.14□□□□□ -0.63
MSH6-206ENST00000455383 LINC00862A6NCI5 91 aa11.14□□□□□ -0.63
MSH6-206ENST00000455383 M0QXV9 152 aa11.14□□□□□ -0.63
MSH6-206ENST00000455383 TCAPO15273 167 aa11.14□□□□□ -0.63
MSH6-206ENST00000455383 UBE2D1P51668 147 aa11.14□□□□□ -0.63
MSH6-206ENST00000455383 A0A0U1RQV1 116 aa11.12□□□□□ -0.63
MSH6-206ENST00000455383 ZNF727A8MUV8 499 aa11.12□□□□□ -0.63
MSH6-206ENST00000455383 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
MSH6-206ENST00000455383 UBE2BP63146 152 aa11.11□□□□□ -0.63
MSH6-206ENST00000455383 HBBP68871 147 aa11.11□□□□□ -0.63
MSH6-206ENST00000455383 ALKAL2Q6UX46 152 aa11.11□□□□□ -0.63
MSH6-206ENST00000455383 TRBV30A0A0K0K1B3 111 aa11.1□□□□□ -0.63
MSH6-206ENST00000455383 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
MSH6-206ENST00000455383 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
MSH6-206ENST00000455383 SRP19P09132 144 aaKnown RBP11.1□□□□□ -0.63
MSH6-206ENST00000455383 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
MSH6-206ENST00000455383 SMIM2Q9BVW6 85 aa11.1□□□□□ -0.63
MSH6-206ENST00000455383 CKS2P33552 79 aa11.09□□□□□ -0.63
MSH6-206ENST00000455383 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
MSH6-206ENST00000455383 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
MSH6-206ENST00000455383 TGIF2-C20orf24A0A0A6YYL0 155 aa11.08□□□□□ -0.64
MSH6-206ENST00000455383 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
MSH6-206ENST00000455383 ZNF861PO60384 105 aa11.08□□□□□ -0.64
MSH6-206ENST00000455383 LCE2AQ5TA79 106 aaPredicted RBP11.08□□□□□ -0.64
MSH6-206ENST00000455383 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
MSH6-206ENST00000455383 LINC00242Q5T6M2 205 aa11.07□□□□□ -0.64
MSH6-206ENST00000455383 C2orf82Q6UX34 121 aa11.06□□□□□ -0.64
MSH6-206ENST00000455383 A0A1B0GW15 77 aa11.05□□□□□ -0.64
MSH6-206ENST00000455383 NPYP01303 97 aa11.05□□□□□ -0.64
MSH6-206ENST00000455383 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
MSH6-206ENST00000455383 PYGO1Q9Y3Y4 419 aa11.05□□□□□ -0.64
MSH6-206ENST00000455383 MUC17Q685J3 4493 aa11.04□□□□□ -0.64
MSH6-206ENST00000455383 D6R8Y8 96 aa11.04□□□□□ -0.64
MSH6-206ENST00000455383 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
MSH6-206ENST00000455383 NUPR1O60356 82 aa11.03□□□□□ -0.64
MSH6-206ENST00000455383 PACRGQ96M98 296 aaPredicted RBP11.03□□□□□ -0.64
MSH6-206ENST00000455383 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
MSH6-206ENST00000455383 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.65
MSH6-206ENST00000455383 TSPAN13O95857 204 aa11.01□□□□□ -0.65
MSH6-206ENST00000455383 C22orf24Q9Y442 160 aa11.01□□□□□ -0.65
MSH6-206ENST00000455383 A0A1B0GXF2 115 aa11□□□□□ -0.65
MSH6-206ENST00000455383 PPBPP02775 128 aa11□□□□□ -0.65
MSH6-206ENST00000455383 A0A087X002 238 aa10.99□□□□□ -0.65
MSH6-206ENST00000455383 F8W036 122 aa10.99□□□□□ -0.65
MSH6-206ENST00000455383 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
MSH6-206ENST00000455383 CTDSP1Q9GZU7 261 aa10.99□□□□□ -0.65
MSH6-206ENST00000455383 S100A8P05109 93 aa10.98□□□□□ -0.65
MSH6-206ENST00000455383 ADIRFQ15847 76 aa10.98□□□□□ -0.65
MSH6-206ENST00000455383 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
MSH6-206ENST00000455383 RAB5AP20339 215 aa10.97□□□□□ -0.65
MSH6-206ENST00000455383 LBHQ53QV2 105 aaPredicted RBP10.97□□□□□ -0.65
MSH6-206ENST00000455383 PRSS47A8MTI9 375 aa10.96□□□□□ -0.65
MSH6-206ENST00000455383 C9JQL5 133 aa10.96□□□□□ -0.65
MSH6-206ENST00000455383 MRPL54Q6P161 138 aaKnown RBP10.96□□□□□ -0.65
MSH6-206ENST00000455383 TP73-AS1Q9UF72 201 aa10.96□□□□□ -0.65
MSH6-206ENST00000455383 Q6ZN92 141 aa10.95□□□□□ -0.66
MSH6-206ENST00000455383 TEX43Q6ZNM6 134 aa10.95□□□□□ -0.66
MSH6-206ENST00000455383 LINC00173Q6ZV60 143 aa10.95□□□□□ -0.66
MSH6-206ENST00000455383 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
MSH6-206ENST00000455383 LINC00469Q8N7U9 141 aa10.95□□□□□ -0.66
MSH6-206ENST00000455383 CRYGAP11844 174 aa10.94□□□□□ -0.66
MSH6-206ENST00000455383 RPL28P46779 137 aaKnown RBP10.94□□□□□ -0.66
MSH6-206ENST00000455383 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
MSH6-206ENST00000455383 AMELXQ99217 191 aa10.94□□□□□ -0.66
MSH6-206ENST00000455383 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
MSH6-206ENST00000455383 BCE1O60756 84 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 PRSS2P07478 247 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 Q8IZM0 81 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 TYMSOSQ8TAI1 123 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 PRELID3AQ96N28 172 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 C2orf88Q9BSF0 95 aa10.93□□□□□ -0.66
MSH6-206ENST00000455383 KRTAP9-6A0A140TA67 174 aa10.92□□□□□ -0.66
MSH6-206ENST00000455383 CKS1BP61024 79 aa10.92□□□□□ -0.66
MSH6-206ENST00000455383 ZC2HC1BQ5TFG8 222 aa10.92□□□□□ -0.66
MSH6-206ENST00000455383 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
MSH6-206ENST00000455383 C6orf226Q5I0X4 101 aa10.91□□□□□ -0.66
MSH6-206ENST00000455383 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
MSH6-206ENST00000455383 NPSP0C0P6 89 aa10.9□□□□□ -0.66
MSH6-206ENST00000455383 C2orf66Q6UXQ4 117 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms