RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 A6NED7 52 aa10.23□□□□□ -0.77
RAPGEF3-205ENST00000449771 PMAIP1Q13794 54 aa10.21□□□□□ -0.77
RAPGEF3-205ENST00000449771 UBE2D2P62837 147 aa10.21□□□□□ -0.77
RAPGEF3-205ENST00000449771 DSCAMO60469 2012 aa10.21□□□□□ -0.78
RAPGEF3-205ENST00000449771 C11orf21Q9P2W6 132 aa10.21□□□□□ -0.78
RAPGEF3-205ENST00000449771 TNCP24821 2201 aa10.21□□□□□ -0.78
RAPGEF3-205ENST00000449771 NRACQ8N912 160 aa10.21□□□□□ -0.78
RAPGEF3-205ENST00000449771 K7ERS5 55 aa10.2□□□□□ -0.78
RAPGEF3-205ENST00000449771 Q6ZQY7 126 aa10.2□□□□□ -0.78
RAPGEF3-205ENST00000449771 EDN2P20800 178 aa10.19□□□□□ -0.78
RAPGEF3-205ENST00000449771 LINC00310P59036 64 aa10.19□□□□□ -0.78
RAPGEF3-205ENST00000449771 WFDC13Q8IUB5 93 aa10.19□□□□□ -0.78
RAPGEF3-205ENST00000449771 FREM1Q5H8C1 2179 aa10.19□□□□□ -0.78
RAPGEF3-205ENST00000449771 COX17Q14061 63 aa10.19□□□□□ -0.78
RAPGEF3-205ENST00000449771 Q6JHZ5 121 aa10.18□□□□□ -0.78
RAPGEF3-205ENST00000449771 LST1O00453 97 aa10.18□□□□□ -0.78
RAPGEF3-205ENST00000449771 PRO0628Q9UI54 55 aa10.18□□□□□ -0.78
RAPGEF3-205ENST00000449771 ARHGAP21Q5T5U3 1957 aa10.18□□□□□ -0.78
RAPGEF3-205ENST00000449771 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
RAPGEF3-205ENST00000449771 BRI3O95415 125 aa10.17□□□□□ -0.78
RAPGEF3-205ENST00000449771 ZNF73O43830 326 aaPredicted RBP10.17□□□□□ -0.78
RAPGEF3-205ENST00000449771 SMIM11BQ8TCY0 68 aa10.16□□□□□ -0.78
RAPGEF3-205ENST00000449771 IGLV5-52A0A0A0MRZ9 124 aa10.16□□□□□ -0.78
RAPGEF3-205ENST00000449771 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
RAPGEF3-205ENST00000449771 CEP192Q8TEP8 1941 aa10.16□□□□□ -0.78
RAPGEF3-205ENST00000449771 PRR15LQ9BU68 103 aa10.16□□□□□ -0.78
RAPGEF3-205ENST00000449771 Q8IZM0 81 aa10.15□□□□□ -0.78
RAPGEF3-205ENST00000449771 ODF3L2Q3SX64 289 aa10.15□□□□□ -0.78
RAPGEF3-205ENST00000449771 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
RAPGEF3-205ENST00000449771 OTOGLQ3ZCN5 2332 aa10.15□□□□□ -0.78
RAPGEF3-205ENST00000449771 C10orf25Q5T742 122 aa10.15□□□□□ -0.79
RAPGEF3-205ENST00000449771 PCDH15Q96QU1 1955 aa10.14□□□□□ -0.79
RAPGEF3-205ENST00000449771 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-205ENST00000449771 RPL28P46779 137 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-205ENST00000449771 MED12LQ86YW9 2145 aa10.13□□□□□ -0.79
RAPGEF3-205ENST00000449771 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
RAPGEF3-205ENST00000449771 IGLV1-51P01701 117 aa10.12□□□□□ -0.79
RAPGEF3-205ENST00000449771 KIAA1549Q9HCM3 1950 aa10.12□□□□□ -0.79
RAPGEF3-205ENST00000449771 C16orf95Q9H693 158 aa10.12□□□□□ -0.79
RAPGEF3-205ENST00000449771 DSCAML1Q8TD84 2053 aa10.12□□□□□ -0.79
RAPGEF3-205ENST00000449771 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
RAPGEF3-205ENST00000449771 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
RAPGEF3-205ENST00000449771 Q6ZTC4 211 aa10.11□□□□□ -0.79
RAPGEF3-205ENST00000449771 CIRBP-AS1Q8TBR5 109 aa10.11□□□□□ -0.79
RAPGEF3-205ENST00000449771 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
RAPGEF3-205ENST00000449771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.1□□□□□ -0.79
RAPGEF3-205ENST00000449771 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
RAPGEF3-205ENST00000449771 UNQ6190/PRO20217Q6UXQ8 127 aa10.1□□□□□ -0.79
RAPGEF3-205ENST00000449771 PRR4Q16378 134 aa10.1□□□□□ -0.79
RAPGEF3-205ENST00000449771 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
RAPGEF3-205ENST00000449771 MUC22E2RYF6 1773 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF3-205ENST00000449771 MUC7Q8TAX7 377 aa10.09□□□□□ -0.79
RAPGEF3-205ENST00000449771 CRIP2P52943 208 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF3-205ENST00000449771 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
RAPGEF3-205ENST00000449771 Q8N9L7 120 aa10.08□□□□□ -0.8
RAPGEF3-205ENST00000449771 FAM30AQ9NZY2 134 aa10.08□□□□□ -0.8
RAPGEF3-205ENST00000449771 EGFEM1PQ0D2K5 195 aa10.08□□□□□ -0.8
RAPGEF3-205ENST00000449771 A0A087WVE0 104 aa10.07□□□□□ -0.8
RAPGEF3-205ENST00000449771 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
RAPGEF3-205ENST00000449771 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
RAPGEF3-205ENST00000449771 C4orf26Q17RF5 130 aa10.07□□□□□ -0.8
RAPGEF3-205ENST00000449771 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
RAPGEF3-205ENST00000449771 C1orf134Q5TEV5 83 aa10.06□□□□□ -0.8
RAPGEF3-205ENST00000449771 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
RAPGEF3-205ENST00000449771 FHL2Q14192 279 aa10.06□□□□□ -0.8
RAPGEF3-205ENST00000449771 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
RAPGEF3-205ENST00000449771 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
RAPGEF3-205ENST00000449771 Q6ZVQ6 151 aa10.04□□□□□ -0.8
RAPGEF3-205ENST00000449771 C1orf137Q5JT78 98 aa10.04□□□□□ -0.8
RAPGEF3-205ENST00000449771 ANKHD1Q8IWZ3 2542 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-205ENST00000449771 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
RAPGEF3-205ENST00000449771 FSHBP01225 129 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 COX6A2Q02221 97 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 ESRGQ1W209 222 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 IGIPA6NJ69 53 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 PSPHP1O15172 72 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 PCNX3Q9H6A9 2034 aa10.03□□□□□ -0.8
RAPGEF3-205ENST00000449771 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
RAPGEF3-205ENST00000449771 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
RAPGEF3-205ENST00000449771 TANC2Q9HCD6 1990 aa10.01□□□□□ -0.81
RAPGEF3-205ENST00000449771 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
RAPGEF3-205ENST00000449771 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
RAPGEF3-205ENST00000449771 PRYO14603 147 aa10□□□□□ -0.81
RAPGEF3-205ENST00000449771 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
RAPGEF3-205ENST00000449771 IGHV6-1A0A0B4J1U7 121 aa9.99□□□□□ -0.81
RAPGEF3-205ENST00000449771 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
RAPGEF3-205ENST00000449771 PRR14LQ5THK1 2151 aa9.99□□□□□ -0.81
RAPGEF3-205ENST00000449771 ACACBO00763 2458 aa9.99□□□□□ -0.81
RAPGEF3-205ENST00000449771 PRR3P79522 188 aaKnown RBP9.99□□□□□ -0.81
RAPGEF3-205ENST00000449771 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
RAPGEF3-205ENST00000449771 NOTCH2Q04721 2471 aa9.98□□□□□ -0.81
RAPGEF3-205ENST00000449771 RPS28P62857 69 aaKnown RBP9.98□□□□□ -0.81
RAPGEF3-205ENST00000449771 Q8N814 137 aa9.98□□□□□ -0.81
RAPGEF3-205ENST00000449771 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
RAPGEF3-205ENST00000449771 LRP4O75096 1905 aa9.97□□□□□ -0.81
RAPGEF3-205ENST00000449771 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
RAPGEF3-205ENST00000449771 CSPG4Q6UVK1 2322 aa9.97□□□□□ -0.81
RAPGEF3-205ENST00000449771 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms