RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 GAGE12HA6NDE8 117 aa6.11□□□□□ -1.43
RFX3-207ENST00000449190 SERF1AO75920 110 aa6.11□□□□□ -1.43
RFX3-207ENST00000449190 XCL1P47992 114 aa6.11□□□□□ -1.43
RFX3-207ENST00000449190 NDUFA6P56556 154 aa6.11□□□□□ -1.43
RFX3-207ENST00000449190 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
RFX3-207ENST00000449190 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
RFX3-207ENST00000449190 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
RFX3-207ENST00000449190 SPATA12Q7Z6I5 190 aa6.1□□□□□ -1.43
RFX3-207ENST00000449190 BAALCQ8WXS3 180 aa6.1□□□□□ -1.43
RFX3-207ENST00000449190 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 LEPROTL1O95214 131 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 PRSS1P07477 247 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 MALP21145 153 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 SEC11AP67812 179 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 PMVKQ15126 192 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 C14orf177Q52M58 125 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 FAM19A2Q8N3H0 131 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 AMELXQ99217 191 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.43
RFX3-207ENST00000449190 A0A087WTM6 91 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 A0A096LNJ9 63 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 COX7A2LO14548 114 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 S100A6P06703 90 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 FAM104AQ969W3 186 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 IFI27L1Q96BM0 104 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 CST9LQ9H4G1 147 aa6.08□□□□□ -1.44
RFX3-207ENST00000449190 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
RFX3-207ENST00000449190 LECT2O14960 151 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 NUPR1O60356 82 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 APOMO95445 188 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 FABP4P15090 132 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 UBE2D1P51668 147 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 FOXI1Q12951 378 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 ZC2HC1BQ5TFG8 222 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 KRTAP26-1Q6PEX3 210 aa6.07□□□□□ -1.44
RFX3-207ENST00000449190 IGHV1-58A0A0C4DH39 117 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 USP17L23D6RBM5 183 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 LINC00310P59036 64 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 HERVK_113P63121 156 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 COA6Q5JTJ3 125 aaKnown RBP6.06□□□□□ -1.44
RFX3-207ENST00000449190 CDPF1Q6NVV7 123 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 C5orf38Q86SI9 138 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 MAPKAPK5-AS1Q8N8E1 139 aa6.06□□□□□ -1.44
RFX3-207ENST00000449190 TRAV12-1A0A0B4J245 112 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 A0A0J9YXV3 536 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 TINCRA0A1B0GVN0 87 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 CDK2AP2O75956 126 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 LINC00242Q5T6M2 205 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 LINC00173Q6ZV60 143 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 Q8N814 137 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 PACRGQ96M98 296 aaPredicted RBP6.05□□□□□ -1.44
RFX3-207ENST00000449190 MAP1LC3CQ9BXW4 147 aa6.05□□□□□ -1.44
RFX3-207ENST00000449190 CHTOPQ9Y3Y2 248 aaKnown RBP6.05□□□□□ -1.44
RFX3-207ENST00000449190 hDV102S1A0JD36 115 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 H0Y8G0 127 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 ZNF561-AS1K7EIQ3 104 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 S100A2P29034 98 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 COX6A2Q02221 97 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 FAM19A3Q7Z5A8 133 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 LINC00469Q8N7U9 141 aa6.04□□□□□ -1.44
RFX3-207ENST00000449190 NTN5Q8WTR8 489 aaPredicted RBP6.04□□□□□ -1.44
RFX3-207ENST00000449190 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.03□□□□□ -1.44
RFX3-207ENST00000449190 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
RFX3-207ENST00000449190 H3BRM9 83 aa6.03□□□□□ -1.44
RFX3-207ENST00000449190 WFDC2Q14508 124 aa6.03□□□□□ -1.44
RFX3-207ENST00000449190 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
RFX3-207ENST00000449190 LINC01561Q8N1V8 128 aa6.03□□□□□ -1.44
RFX3-207ENST00000449190 IGHV3-64A0A075B6Q5 118 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 A0A087WZ39 114 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 IGLV5-52A0A0A0MRZ9 124 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
RFX3-207ENST00000449190 PRSS2P07478 247 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 HIGD2BQ4VC39 106 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 OR10D4PQ8NGN7 298 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 ORAOV1Q8WV07 137 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 CHAC1Q9BUX1 264 aa6.02□□□□□ -1.45
RFX3-207ENST00000449190 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
RFX3-207ENST00000449190 IGLC3P0DOY3 106 aa6.01□□□□□ -1.45
RFX3-207ENST00000449190 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
RFX3-207ENST00000449190 C15orf56Q8N910 161 aa6.01□□□□□ -1.45
RFX3-207ENST00000449190 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
RFX3-207ENST00000449190 HECTD4Q9Y4D8 3996 aa6□□□□□ -1.45
RFX3-207ENST00000449190 GVQW2A0A096LPI5 108 aaPredicted RBP6□□□□□ -1.45
RFX3-207ENST00000449190 F8VRH5 84 aa6□□□□□ -1.45
RFX3-207ENST00000449190 F8WDY8 70 aa6□□□□□ -1.45
RFX3-207ENST00000449190 GCSHP23434 173 aa6□□□□□ -1.45
RFX3-207ENST00000449190 KRTDAPP60985 99 aa6□□□□□ -1.45
RFX3-207ENST00000449190 SNRPEP62304 92 aaKnown RBP6□□□□□ -1.45
RFX3-207ENST00000449190 SPAG11BQ08648 103 aa6□□□□□ -1.45
RFX3-207ENST00000449190 C6orf226Q5I0X4 101 aa6□□□□□ -1.45
RFX3-207ENST00000449190 MRPL35Q9NZE8 188 aaKnown RBP6□□□□□ -1.45
RFX3-207ENST00000449190 IGLV4-69A0A075B6H9 119 aa5.99□□□□□ -1.45
RFX3-207ENST00000449190 IGLV5-45A0A087WSX0 123 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms