RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RPL37AP61513 92 aaKnown RBP8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 MAJINQ3KP22 176 aa8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 C2orf66Q6UXQ4 117 aa8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 GNB1LQ9BYB4 327 aa8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 NXT2Q9NPJ8 142 aaKnown RBP8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 PLAC8Q9NZF1 115 aa8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
PRPF40A-203ENST00000448428 K7EMI3 77 aa8.06□□□□□ -1.12
PRPF40A-203ENST00000448428 APOMO95445 188 aa8.06□□□□□ -1.12
PRPF40A-203ENST00000448428 ORMDL2Q53FV1 153 aa8.06□□□□□ -1.12
PRPF40A-203ENST00000448428 TMEM141Q96I45 108 aa8.06□□□□□ -1.12
PRPF40A-203ENST00000448428 RPS10P5Q9NQ39 176 aa8.06□□□□□ -1.12
PRPF40A-203ENST00000448428 RHEBQ15382 184 aa8.05□□□□□ -1.12
PRPF40A-203ENST00000448428 ZC2HC1BQ5TFG8 222 aa8.05□□□□□ -1.12
PRPF40A-203ENST00000448428 Q6ZRU5 148 aa8.05□□□□□ -1.12
PRPF40A-203ENST00000448428 C2orf48Q96LS8 159 aa8.05□□□□□ -1.12
PRPF40A-203ENST00000448428 IGIPA6NJ69 53 aa8.04□□□□□ -1.12
PRPF40A-203ENST00000448428 LINC00242Q5T6M2 205 aa8.04□□□□□ -1.12
PRPF40A-203ENST00000448428 STPG4Q8N801 248 aa8.04□□□□□ -1.12
PRPF40A-203ENST00000448428 CAMK2N2Q96S95 79 aa8.04□□□□□ -1.12
PRPF40A-203ENST00000448428 UBE2D1P51668 147 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 SPAG11BQ08648 103 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 TEX43Q6ZNM6 134 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 LINC00173Q6ZV60 143 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 OR10D4PQ8NGN7 298 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 ORAOV1Q8WV07 137 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 AMELXQ99217 191 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 VCX2Q9H322 139 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 LINC00474Q9P2X8 69 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 PKIGQ9Y2B9 76 aa8.03□□□□□ -1.12
PRPF40A-203ENST00000448428 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
PRPF40A-203ENST00000448428 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
PRPF40A-203ENST00000448428 NPSP0C0P6 89 aa8.02□□□□□ -1.13
PRPF40A-203ENST00000448428 COX19Q49B96 90 aa8.02□□□□□ -1.13
PRPF40A-203ENST00000448428 A0A087WZ39 114 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 APOC3P02656 99 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 G0S2P27469 103 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 FABP9Q0Z7S8 132 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 Q6ZN92 141 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 MRPL18Q9H0U6 180 aaKnown RBP8.01□□□□□ -1.13
PRPF40A-203ENST00000448428 A0A0J9YXV3 536 aa8□□□□□ -1.13
PRPF40A-203ENST00000448428 LINC01546A6NGU7 62 aa8□□□□□ -1.13
PRPF40A-203ENST00000448428 F8WDY8 70 aa8□□□□□ -1.13
PRPF40A-203ENST00000448428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
PRPF40A-203ENST00000448428 J3QL48 77 aa8□□□□□ -1.13
PRPF40A-203ENST00000448428 MT-ND6P03923 174 aa8□□□□□ -1.13
PRPF40A-203ENST00000448428 RNF151Q2KHN1 245 aa8□□□□□ -1.13
PRPF40A-203ENST00000448428 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 C10orf25Q5T742 122 aa7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 FAM19A3Q7Z5A8 133 aa7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 C7orf33Q8WU49 177 aa7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 TIMM17AQ99595 171 aa7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 MRPL35Q9NZE8 188 aaKnown RBP7.99□□□□□ -1.13
PRPF40A-203ENST00000448428 NDUFA1O15239 70 aa7.98□□□□□ -1.13
PRPF40A-203ENST00000448428 SNAPINO95295 136 aa7.98□□□□□ -1.13
PRPF40A-203ENST00000448428 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
PRPF40A-203ENST00000448428 ERASQ7Z444 233 aa7.98□□□□□ -1.13
PRPF40A-203ENST00000448428 SVBPQ8N300 66 aa7.98□□□□□ -1.13
PRPF40A-203ENST00000448428 SCGB3A1Q96QR1 104 aa7.98□□□□□ -1.13
PRPF40A-203ENST00000448428 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
PRPF40A-203ENST00000448428 RPL18AQ02543 176 aaKnown RBP7.97□□□□□ -1.13
PRPF40A-203ENST00000448428 NDUFA5Q16718 116 aa7.97□□□□□ -1.13
PRPF40A-203ENST00000448428 PAPPA-AS1Q5QFB9 102 aa7.97□□□□□ -1.13
PRPF40A-203ENST00000448428 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
PRPF40A-203ENST00000448428 TRAPPC1Q9Y5R8 145 aa7.97□□□□□ -1.13
PRPF40A-203ENST00000448428 MYCBP2O75592 4640 aa7.96□□□□□ -1.13
PRPF40A-203ENST00000448428 OXTP01178 125 aa7.96□□□□□ -1.14
PRPF40A-203ENST00000448428 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
PRPF40A-203ENST00000448428 C6orf48Q9UBA6 75 aa7.96□□□□□ -1.14
PRPF40A-203ENST00000448428 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
PRPF40A-203ENST00000448428 SMCO4Q9NRQ5 59 aa7.95□□□□□ -1.14
PRPF40A-203ENST00000448428 CDKN2A-AS1Q9UH64 79 aa7.95□□□□□ -1.14
PRPF40A-203ENST00000448428 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 TLX1NBP0CAT3 122 aa7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 HERVK_113P63121 156 aa7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 SEC11AP67812 179 aa7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-203ENST00000448428 PRR3P79522 188 aaKnown RBP7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 Q6ZRP5 223 aa7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 C18orf32Q8TCD1 76 aa7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 YPEL4Q96NS1 127 aa7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 CST9LQ9H4G1 147 aa7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
PRPF40A-203ENST00000448428 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
PRPF40A-203ENST00000448428 LINC00614P0C842 121 aa7.92□□□□□ -1.14
PRPF40A-203ENST00000448428 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
PRPF40A-203ENST00000448428 A0A096LNJ9 63 aa7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 TINCRA0A1B0GVN0 87 aa7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 PRSS2P07478 247 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms