RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 COX8AP10176 69 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 BCL2P10415 239 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 PFN2P35080 140 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 TAS2R45P59539 299 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 SNRPD3P62318 126 aaKnown RBP2.96□□□□□ -1.94
SDCBP-205ENST00000447267 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
SDCBP-205ENST00000447267 ZNF90Q03938 601 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 AMTNQ6UX39 209 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 TMEM14EPQ6UXP3 125 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 TMEM136Q6ZRR5 245 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 THAP8Q8NA92 274 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 OR51H1Q8NH63 302 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 GTSF1Q8WW33 167 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 LINC00526Q96FQ7 95 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 PYGO1Q9Y3Y4 419 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 KLF12Q9Y4X4 402 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 TIMM8BQ9Y5J9 83 aaPredicted RBP2.96□□□□□ -1.94
SDCBP-205ENST00000447267 F11RQ9Y624 299 aaKnown RBP2.96□□□□□ -1.94
SDCBP-205ENST00000447267 ICOSQ9Y6W8 199 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 ARL2-SNX15V9GYD0 113 aa2.96□□□□□ -1.94
SDCBP-205ENST00000447267 TRAV1-1A0A0B4J248 108 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 TRAV4A0A0B4J268 109 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 E9PLD3 99 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 F6UB75 175 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 I3L2K1 104 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 M0R2P5 195 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 UQCRQO14949 82 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 TMEM258P61165 79 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 RPL30P62888 115 aaKnown RBP2.95□□□□□ -1.94
SDCBP-205ENST00000447267 IL15RAQ13261 267 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 ZC2HC1BQ5TFG8 222 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 LYRM7Q5U5X0 104 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 GAGE2AQ6NT46 116 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 C6orf201Q7Z4U5 140 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 HOGA1Q86XE5 327 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 SMIM7Q9BQ49 75 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 HDHD3Q9BSH5 251 aaPredicted RBP2.95□□□□□ -1.94
SDCBP-205ENST00000447267 SPANXDQ9BXN6 97 aa2.95□□□□□ -1.94
SDCBP-205ENST00000447267 FAM24AA6NFZ4 105 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 NDUFC2O95298 119 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 IGHV3-48P01763 117 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 NPPCP23582 126 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 FOXA3P55318 350 aaPredicted RBP2.94□□□□□ -1.94
SDCBP-205ENST00000447267 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 SP6Q3SY56 376 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 ZNF876PQ49A33 203 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 EBLN2Q6P2I7 272 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 CD164L2Q6UWJ8 174 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 LINC01561Q8N1V8 128 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 C7orf33Q8WU49 177 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 TSKUQ8WUA8 353 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 C16orf74Q96GX8 76 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 PGLYRP3Q96LB9 341 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 LINC00479Q96M42 142 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 TMEM147Q9BVK8 224 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 KCNIP2Q9NS61 270 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 GNG13Q9P2W3 67 aa2.94□□□□□ -1.94
SDCBP-205ENST00000447267 IGKV3D-20A0A0C4DH25 116 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 IGHV3-38A0A0C4DH36 116 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 A0A0J9YX75 114 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 C3orf85A0A1B0GTC6 90 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 RBAKDNA6NC62 111 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 A8MWL6 223 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 TMEM14DPA8MWL7 114 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 J3QRE1 110 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 INSP01308 110 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 APCSP02743 223 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 PRSS1P07477 247 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 RPL13AP40429 203 aaKnown RBP2.93□□□□□ -1.94
SDCBP-205ENST00000447267 EIF4EBP1Q13541 118 aaPredicted RBP2.93□□□□□ -1.94
SDCBP-205ENST00000447267 CIRBPQ14011 172 aaKnown RBP2.93□□□□□ -1.94
SDCBP-205ENST00000447267 SDIM1Q6ZPB5 146 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 Q6ZQT7 251 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 TEN1Q86WV5 123 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 ANKRD29Q8N6D5 301 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 METTL26Q96S19 204 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 GFI1Q99684 422 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 RETNLBQ9BQ08 111 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 PDCD1LG2Q9BQ51 273 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 CHCHD5Q9BSY4 110 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 ZNF331Q9NQX6 463 aaPredicted RBP2.93□□□□□ -1.94
SDCBP-205ENST00000447267 V9GY05 133 aa2.93□□□□□ -1.94
SDCBP-205ENST00000447267 TRAV12-2A0A075B6T6 113 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 TRAV18A0A075B6X5 111 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 A0A1W2PPK0 400 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 ZFP92A6NM28 416 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 CEBPZOSA8MTT3 80 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 SOCS3O14543 225 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 NCR2O95944 276 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 TRACP01848 142 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 KRTAP1-4P0C5Y4 121 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 FGF6P10767 208 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 VPREB1P12018 145 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 CSN1S1P47710 185 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 SPINK13Q1W4C9 94 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 SPINK9Q5DT21 86 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 LINC01556Q5JQF7 62 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 CFAP126Q5VTH2 177 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms