RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 LAMA2P24043 3122 aaKnown RBP12□□□□□ -0.49
TCOF1-206ENST00000445265 UQCRQO14949 82 aa12□□□□□ -0.49
TCOF1-206ENST00000445265 Q6ZSN1 163 aa11.99□□□□□ -0.49
TCOF1-206ENST00000445265 RPL18AQ02543 176 aaKnown RBP11.99□□□□□ -0.49
TCOF1-206ENST00000445265 NDUFA7O95182 113 aa11.99□□□□□ -0.49
TCOF1-206ENST00000445265 LRRK2Q5S007 2527 aa11.98□□□□□ -0.49
TCOF1-206ENST00000445265 COX6A2Q02221 97 aa11.98□□□□□ -0.49
TCOF1-206ENST00000445265 LINC00694P0DN24 101 aa11.98□□□□□ -0.49
TCOF1-206ENST00000445265 CD164L2Q6UWJ8 174 aa11.98□□□□□ -0.49
TCOF1-206ENST00000445265 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
TCOF1-206ENST00000445265 SLPIP03973 132 aa11.97□□□□□ -0.49
TCOF1-206ENST00000445265 BBC3Q96PG8 261 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-206ENST00000445265 CCL18P55774 89 aa11.97□□□□□ -0.49
TCOF1-206ENST00000445265 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
TCOF1-206ENST00000445265 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.49
TCOF1-206ENST00000445265 CLUHP3Q96NS8 147 aa11.96□□□□□ -0.49
TCOF1-206ENST00000445265 ETDCA0A1B0GVM5 59 aa11.96□□□□□ -0.5
TCOF1-206ENST00000445265 COX7BP24311 80 aa11.96□□□□□ -0.5
TCOF1-206ENST00000445265 ATP5EP2Q5VTU8 51 aa11.96□□□□□ -0.5
TCOF1-206ENST00000445265 PRO0461Q9UI25 63 aa11.96□□□□□ -0.5
TCOF1-206ENST00000445265 J3KT08 172 aa11.95□□□□□ -0.5
TCOF1-206ENST00000445265 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
TCOF1-206ENST00000445265 KRTAP10-9P60411 292 aa11.95□□□□□ -0.5
TCOF1-206ENST00000445265 MIFP14174 115 aa11.95□□□□□ -0.5
TCOF1-206ENST00000445265 DOPEY1Q5JWR5 2465 aa11.94□□□□□ -0.5
TCOF1-206ENST00000445265 RPL28P46779 137 aaKnown RBP11.94□□□□□ -0.5
TCOF1-206ENST00000445265 Q8IZM0 81 aa11.94□□□□□ -0.5
TCOF1-206ENST00000445265 HILS1P60008 231 aa11.94□□□□□ -0.5
TCOF1-206ENST00000445265 C6orf99Q4VX62 202 aa11.94□□□□□ -0.5
TCOF1-206ENST00000445265 LINC00482Q8N8I6 264 aa11.93□□□□□ -0.5
TCOF1-206ENST00000445265 IGLV1-51P01701 117 aa11.93□□□□□ -0.5
TCOF1-206ENST00000445265 NREPQ16612 68 aa11.93□□□□□ -0.5
TCOF1-206ENST00000445265 A0A087WZ39 114 aa11.92□□□□□ -0.5
TCOF1-206ENST00000445265 C3orf22Q8N5N4 141 aa11.92□□□□□ -0.5
TCOF1-206ENST00000445265 C11orf72Q8NBR9 251 aa11.92□□□□□ -0.5
TCOF1-206ENST00000445265 CDIP1Q9H305 208 aa11.92□□□□□ -0.5
TCOF1-206ENST00000445265 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
TCOF1-206ENST00000445265 SMCPP49901 116 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-206ENST00000445265 COX17Q14061 63 aa11.9□□□□□ -0.5
TCOF1-206ENST00000445265 POLQO75417 2590 aa11.9□□□□□ -0.5
TCOF1-206ENST00000445265 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.51
TCOF1-206ENST00000445265 Q8N2B8 174 aa11.89□□□□□ -0.51
TCOF1-206ENST00000445265 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
TCOF1-206ENST00000445265 UBE2BP63146 152 aa11.89□□□□□ -0.51
TCOF1-206ENST00000445265 HIGD2BQ4VC39 106 aa11.89□□□□□ -0.51
TCOF1-206ENST00000445265 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
TCOF1-206ENST00000445265 CCDC179H3BU77 68 aa11.88□□□□□ -0.51
TCOF1-206ENST00000445265 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
TCOF1-206ENST00000445265 TRAV23DV6A0A075B6W5 121 aa11.88□□□□□ -0.51
TCOF1-206ENST00000445265 IGHV4-28A0A0C4DH34 117 aa11.88□□□□□ -0.51
TCOF1-206ENST00000445265 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
TCOF1-206ENST00000445265 MUC7Q8TAX7 377 aa11.88□□□□□ -0.51
TCOF1-206ENST00000445265 FHL2Q14192 279 aa11.87□□□□□ -0.51
TCOF1-206ENST00000445265 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
TCOF1-206ENST00000445265 UNC80Q8N2C7 3258 aa11.87□□□□□ -0.51
TCOF1-206ENST00000445265 LELP1Q5T871 98 aa11.86□□□□□ -0.51
TCOF1-206ENST00000445265 MTORP42345 2549 aa11.85□□□□□ -0.51
TCOF1-206ENST00000445265 XAGE1AQ9HD64 81 aa11.85□□□□□ -0.51
TCOF1-206ENST00000445265 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
TCOF1-206ENST00000445265 PKD1L2Q7Z442 2459 aa11.85□□□□□ -0.51
TCOF1-206ENST00000445265 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
TCOF1-206ENST00000445265 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
TCOF1-206ENST00000445265 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
TCOF1-206ENST00000445265 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
TCOF1-206ENST00000445265 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
TCOF1-206ENST00000445265 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
TCOF1-206ENST00000445265 Q6JHZ5 121 aa11.83□□□□□ -0.52
TCOF1-206ENST00000445265 SERP2Q8N6R1 65 aa11.82□□□□□ -0.52
TCOF1-206ENST00000445265 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
TCOF1-206ENST00000445265 INAFM1C9JVW0 142 aa11.82□□□□□ -0.52
TCOF1-206ENST00000445265 COX7CP15954 63 aa11.82□□□□□ -0.52
TCOF1-206ENST00000445265 Q6ZQY7 126 aa11.81□□□□□ -0.52
TCOF1-206ENST00000445265 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
TCOF1-206ENST00000445265 A0A1B0GUV1 79 aa11.8□□□□□ -0.52
TCOF1-206ENST00000445265 TMEM258P61165 79 aa11.8□□□□□ -0.52
TCOF1-206ENST00000445265 MRAPQ8TCY5 172 aa11.8□□□□□ -0.52
TCOF1-206ENST00000445265 C20orf197Q8N268 126 aa11.8□□□□□ -0.52
TCOF1-206ENST00000445265 C11orf45Q8TAV5 145 aa11.8□□□□□ -0.52
TCOF1-206ENST00000445265 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
TCOF1-206ENST00000445265 LINC00526Q96FQ7 95 aa11.79□□□□□ -0.52
TCOF1-206ENST00000445265 A0A087WYN8 130 aa11.79□□□□□ -0.52
TCOF1-206ENST00000445265 Q9UF83 564 aa11.79□□□□□ -0.52
TCOF1-206ENST00000445265 LY6G6DO95868 133 aa11.78□□□□□ -0.52
TCOF1-206ENST00000445265 MUC4Q99102 2169 aa11.78□□□□□ -0.52
TCOF1-206ENST00000445265 PKIGQ9Y2B9 76 aa11.77□□□□□ -0.52
TCOF1-206ENST00000445265 CCKP06307 115 aa11.77□□□□□ -0.53
TCOF1-206ENST00000445265 CYSRT1A8MQ03 144 aa11.77□□□□□ -0.53
TCOF1-206ENST00000445265 LINC00337Q8N6G1 96 aa11.76□□□□□ -0.53
TCOF1-206ENST00000445265 BPY2O14599 106 aa11.76□□□□□ -0.53
TCOF1-206ENST00000445265 Q8N814 137 aa11.76□□□□□ -0.53
TCOF1-206ENST00000445265 DEFB131BA0A096LNP1 70 aa11.76□□□□□ -0.53
TCOF1-206ENST00000445265 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
TCOF1-206ENST00000445265 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
TCOF1-206ENST00000445265 NDUFC2O95298 119 aa11.75□□□□□ -0.53
TCOF1-206ENST00000445265 IGHV3OR16-9A0A0B4J2B5 98 aa11.75□□□□□ -0.53
TCOF1-206ENST00000445265 M0R378 163 aa11.75□□□□□ -0.53
TCOF1-206ENST00000445265 UNQ6190/PRO20217Q6UXQ8 127 aa11.75□□□□□ -0.53
TCOF1-206ENST00000445265 TRIOO75962 3097 aa11.74□□□□□ -0.53
TCOF1-206ENST00000445265 KPRPQ5T749 579 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-206ENST00000445265 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms