RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 Q6ZUT4 128 aa8.48□□□□□ -1.05
PTPRE-203ENST00000442830 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
PTPRE-203ENST00000442830 F8W036 122 aa8.47□□□□□ -1.05
PTPRE-203ENST00000442830 SMKR1H3BMG3 65 aa8.47□□□□□ -1.05
PTPRE-203ENST00000442830 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
PTPRE-203ENST00000442830 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
PTPRE-203ENST00000442830 C1orf137Q5JT78 98 aa8.47□□□□□ -1.05
PTPRE-203ENST00000442830 ORAOV1Q8WV07 137 aa8.47□□□□□ -1.05
PTPRE-203ENST00000442830 SRP19P09132 144 aaKnown RBP8.46□□□□□ -1.06
PTPRE-203ENST00000442830 CKS2P33552 79 aa8.46□□□□□ -1.06
PTPRE-203ENST00000442830 HBBP68871 147 aa8.46□□□□□ -1.06
PTPRE-203ENST00000442830 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
PTPRE-203ENST00000442830 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.06
PTPRE-203ENST00000442830 SMIM27A0A1W2PRY6 76 aa8.45□□□□□ -1.06
PTPRE-203ENST00000442830 PPBPP02775 128 aa8.45□□□□□ -1.06
PTPRE-203ENST00000442830 SMIM2Q9BVW6 85 aa8.45□□□□□ -1.06
PTPRE-203ENST00000442830 TGIF2-C20orf24A0A0A6YYL0 155 aa8.44□□□□□ -1.06
PTPRE-203ENST00000442830 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
PTPRE-203ENST00000442830 IGLV7-43P04211 117 aa8.44□□□□□ -1.06
PTPRE-203ENST00000442830 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
PTPRE-203ENST00000442830 NAT8Q9UHE5 227 aa8.44□□□□□ -1.06
PTPRE-203ENST00000442830 IGLV1-50A0A075B6I6 118 aa8.43□□□□□ -1.06
PTPRE-203ENST00000442830 IFITM10A6NMD0 228 aa8.43□□□□□ -1.06
PTPRE-203ENST00000442830 TNFRSF6BO95407 300 aa8.43□□□□□ -1.06
PTPRE-203ENST00000442830 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
PTPRE-203ENST00000442830 ADIRFQ15847 76 aa8.43□□□□□ -1.06
PTPRE-203ENST00000442830 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
PTPRE-203ENST00000442830 SMDT1Q9H4I9 107 aa8.43□□□□□ -1.06
PTPRE-203ENST00000442830 A0A087WZ39 114 aa8.42□□□□□ -1.06
PTPRE-203ENST00000442830 H0Y9J4 135 aa8.42□□□□□ -1.06
PTPRE-203ENST00000442830 IFI27P40305 119 aaPredicted RBP8.42□□□□□ -1.06
PTPRE-203ENST00000442830 RNF213Q63HN8 5207 aa8.42□□□□□ -1.06
PTPRE-203ENST00000442830 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
PTPRE-203ENST00000442830 RAB5AP20339 215 aa8.41□□□□□ -1.06
PTPRE-203ENST00000442830 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
PTPRE-203ENST00000442830 D6R8Y8 96 aa8.4□□□□□ -1.06
PTPRE-203ENST00000442830 RPL13AP40429 203 aaKnown RBP8.4□□□□□ -1.06
PTPRE-203ENST00000442830 PEA15Q15121 130 aa8.4□□□□□ -1.06
PTPRE-203ENST00000442830 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.06
PTPRE-203ENST00000442830 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
PTPRE-203ENST00000442830 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
PTPRE-203ENST00000442830 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
PTPRE-203ENST00000442830 M0QXV9 152 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 UBE2D1P51668 147 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 UBE2BP63146 152 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 FAM19A5Q7Z5A7 132 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-203ENST00000442830 TMEM141Q96I45 108 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 PACRGQ96M98 296 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-203ENST00000442830 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
PTPRE-203ENST00000442830 A0A1B0GXF2 115 aa8.37□□□□□ -1.07
PTPRE-203ENST00000442830 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
PTPRE-203ENST00000442830 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
PTPRE-203ENST00000442830 UNQ6190/PRO20217Q6UXQ8 127 aa8.37□□□□□ -1.07
PTPRE-203ENST00000442830 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
PTPRE-203ENST00000442830 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
PTPRE-203ENST00000442830 NPYP01303 97 aa8.36□□□□□ -1.07
PTPRE-203ENST00000442830 NPSP0C0P6 89 aa8.36□□□□□ -1.07
PTPRE-203ENST00000442830 C10orf25Q5T742 122 aa8.36□□□□□ -1.07
PTPRE-203ENST00000442830 MRPL54Q6P161 138 aaKnown RBP8.36□□□□□ -1.07
PTPRE-203ENST00000442830 Q6ZN92 141 aa8.36□□□□□ -1.07
PTPRE-203ENST00000442830 TEX43Q6ZNM6 134 aa8.36□□□□□ -1.07
PTPRE-203ENST00000442830 FAM104AQ969W3 186 aa8.36□□□□□ -1.07
PTPRE-203ENST00000442830 CARHSP1Q9Y2V2 147 aaKnown RBP8.36□□□□□ -1.07
PTPRE-203ENST00000442830 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
PTPRE-203ENST00000442830 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
PTPRE-203ENST00000442830 IGLV4-3A0A075B6K6 122 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 PRSS47A8MTI9 375 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 K7EMI3 77 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 PRSS2P07478 247 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 PRELID3AQ96N28 172 aa8.34□□□□□ -1.07
PTPRE-203ENST00000442830 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
PTPRE-203ENST00000442830 NUPR1O60356 82 aa8.33□□□□□ -1.08
PTPRE-203ENST00000442830 SEC11AP67812 179 aa8.33□□□□□ -1.08
PTPRE-203ENST00000442830 MAP1LC3AQ9H492 121 aa8.33□□□□□ -1.08
PTPRE-203ENST00000442830 CYSLTR1Q9Y271 337 aa8.33□□□□□ -1.08
PTPRE-203ENST00000442830 G0S2P27469 103 aa8.32□□□□□ -1.08
PTPRE-203ENST00000442830 CKS1BP61024 79 aa8.32□□□□□ -1.08
PTPRE-203ENST00000442830 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-203ENST00000442830 PAPPA-AS1Q5QFB9 102 aa8.32□□□□□ -1.08
PTPRE-203ENST00000442830 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
PTPRE-203ENST00000442830 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
PTPRE-203ENST00000442830 Q8IZM0 81 aa8.31□□□□□ -1.08
PTPRE-203ENST00000442830 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
PTPRE-203ENST00000442830 VCX2Q9H322 139 aa8.3□□□□□ -1.08
PTPRE-203ENST00000442830 C9JQL5 133 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 ZNF861PO60384 105 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 CXCL5P42830 114 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 C6orf226Q5I0X4 101 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 C9orf129Q5T035 196 aaKnown RBP8.29□□□□□ -1.08
PTPRE-203ENST00000442830 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 C2orf66Q6UXQ4 117 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 Q8N8P6 123 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 AMELXQ99217 191 aa8.29□□□□□ -1.08
PTPRE-203ENST00000442830 TP73-AS1Q9UF72 201 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms