RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ODF3L2Q3SX64 289 aa7.11□□□□□ -1.27
SNX13-203ENST00000428135 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
SNX13-203ENST00000428135 PTPRBP23467 1997 aa7.11□□□□□ -1.27
SNX13-203ENST00000428135 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
SNX13-203ENST00000428135 TCL1BO95988 128 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 UBE2D1P51668 147 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 C1orf158Q8N1D5 194 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 FAM236BA0A1B0GV22 79 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 Q6ZTC4 211 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 TSHBP01222 138 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
SNX13-203ENST00000428135 C3orf84H3BNL1 204 aa7.09□□□□□ -1.27
SNX13-203ENST00000428135 MP68P56378 58 aa7.09□□□□□ -1.27
SNX13-203ENST00000428135 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
SNX13-203ENST00000428135 CRIP2P52943 208 aaPredicted RBP7.09□□□□□ -1.28
SNX13-203ENST00000428135 LINC00959A0A1B0GUT2 108 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 G3V4G9 280 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 WFDC10BQ8IUB3 73 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 ACYP1P07311 99 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 SPATA12Q7Z6I5 190 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 B5MCH6 92 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 LELP1Q5T871 98 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 HIGD1BQ9P298 99 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 CPAMD8Q8IZJ3 1885 aa7.08□□□□□ -1.28
SNX13-203ENST00000428135 JMJD7-PLA2G4BH0Y9G9 81 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
SNX13-203ENST00000428135 LINC00308Q8TCZ7 52 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 IGLV4-69A0A075B6H9 119 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 KLLNB2CW77 178 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 KIR2DL5BQ8NHK3 375 aa7.07□□□□□ -1.28
SNX13-203ENST00000428135 CHD9Q3L8U1 2897 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 BPY2O14599 106 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 MRGPRG-AS1Q2M3A8 158 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 TEX49A0A1B0GTD5 131 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 H7C423 109 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 NRACQ8N912 160 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 CD164L2Q6UWJ8 174 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
SNX13-203ENST00000428135 SDIM1Q6ZPB5 146 aa7.05□□□□□ -1.28
SNX13-203ENST00000428135 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
SNX13-203ENST00000428135 COL4A2P08572 1712 aa7.04□□□□□ -1.28
SNX13-203ENST00000428135 IBA57-AS1B1ANH7 110 aa7.04□□□□□ -1.28
SNX13-203ENST00000428135 UBE2D3P61077 147 aa7.04□□□□□ -1.28
SNX13-203ENST00000428135 IGLV1-51P01701 117 aa7.04□□□□□ -1.28
SNX13-203ENST00000428135 TRBV27A0A0K0K1C4 114 aa7.04□□□□□ -1.28
SNX13-203ENST00000428135 TRBV6-5A0A0K0K1A5 114 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 UPK3BQ9BT76 320 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 TRIAP1O43715 76 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 CYSRT1A8MQ03 144 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 AGRNO00468 2067 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
SNX13-203ENST00000428135 SZT2Q5T011 3432 aa7.02□□□□□ -1.29
SNX13-203ENST00000428135 PRR3P79522 188 aaKnown RBP7.02□□□□□ -1.29
SNX13-203ENST00000428135 SPANXB1Q9NS25 103 aaPredicted RBP7.02□□□□□ -1.29
SNX13-203ENST00000428135 IGLV4-60A0A075B6I1 120 aa7.02□□□□□ -1.29
SNX13-203ENST00000428135 CCKP06307 115 aa7.02□□□□□ -1.29
SNX13-203ENST00000428135 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
SNX13-203ENST00000428135 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 Q6ZQY7 126 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 U3KQK5 164 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 IGLV5-52A0A0A0MRZ9 124 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 LINC00694P0DN24 101 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 UBE2D2P62837 147 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 KRTAP24-1Q3LI83 254 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 ENHOQ6UWT2 76 aa7.01□□□□□ -1.29
SNX13-203ENST00000428135 RNASE8Q8TDE3 154 aaKnown RBP7.01□□□□□ -1.29
SNX13-203ENST00000428135 H3BQ85 93 aa7□□□□□ -1.29
SNX13-203ENST00000428135 COX6A2Q02221 97 aa7□□□□□ -1.29
SNX13-203ENST00000428135 Q6ZSN1 163 aa7□□□□□ -1.29
SNX13-203ENST00000428135 MUC4Q99102 2169 aa7□□□□□ -1.29
SNX13-203ENST00000428135 H3BT86 120 aa7□□□□□ -1.29
SNX13-203ENST00000428135 WFDC13Q8IUB5 93 aa7□□□□□ -1.29
SNX13-203ENST00000428135 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
SNX13-203ENST00000428135 POM121L12Q8N7R1 296 aa7□□□□□ -1.29
SNX13-203ENST00000428135 M0QXV9 152 aa6.99□□□□□ -1.29
SNX13-203ENST00000428135 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
SNX13-203ENST00000428135 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
SNX13-203ENST00000428135 TMEM258P61165 79 aa6.99□□□□□ -1.29
SNX13-203ENST00000428135 POLR2KP53803 58 aaKnown RBP6.98□□□□□ -1.29
SNX13-203ENST00000428135 M0R378 163 aa6.98□□□□□ -1.29
SNX13-203ENST00000428135 FHL2Q14192 279 aa6.98□□□□□ -1.29
SNX13-203ENST00000428135 ATOX1O00244 68 aa6.98□□□□□ -1.29
SNX13-203ENST00000428135 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
SNX13-203ENST00000428135 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
SNX13-203ENST00000428135 C16orf95Q9H693 158 aa6.97□□□□□ -1.29
SNX13-203ENST00000428135 WDFY4Q6ZS81 3184 aa6.97□□□□□ -1.29
SNX13-203ENST00000428135 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
SNX13-203ENST00000428135 USP17L23D6RBM5 183 aa6.97□□□□□ -1.29
SNX13-203ENST00000428135 ZNF580Q9UK33 172 aa6.97□□□□□ -1.29
SNX13-203ENST00000428135 CELA1Q9UNI1 258 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms