RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 DAND5Q8N907 189 aa7.83□□□□□ -1.16
TCOF1-204ENST00000427724 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
TCOF1-204ENST00000427724 NHLRC4P0CG21 123 aaPredicted RBP7.82□□□□□ -1.16
TCOF1-204ENST00000427724 ZFAND2AQ8N6M9 145 aa7.82□□□□□ -1.16
TCOF1-204ENST00000427724 TRBV10-2A0A0K0K1G8 114 aa7.82□□□□□ -1.16
TCOF1-204ENST00000427724 NRACQ8N912 160 aa7.82□□□□□ -1.16
TCOF1-204ENST00000427724 TRACP01848 142 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 LECT2O14960 151 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 SPATA3Q8NHX4 192 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 P0DMU3 169 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 FAM231AP0DMU4 169 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 FAM231CP0DMU5 169 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
TCOF1-204ENST00000427724 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
TCOF1-204ENST00000427724 DAZ2Q13117 558 aaKnown RBP7.8□□□□□ -1.16
TCOF1-204ENST00000427724 DAZ4Q86SG3 579 aaKnown RBP7.8□□□□□ -1.16
TCOF1-204ENST00000427724 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
TCOF1-204ENST00000427724 DAZ3Q9NR90 486 aaKnown RBP7.8□□□□□ -1.16
TCOF1-204ENST00000427724 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
TCOF1-204ENST00000427724 LEPROTO15243 131 aa7.79□□□□□ -1.16
TCOF1-204ENST00000427724 Q6ZTC4 211 aa7.79□□□□□ -1.16
TCOF1-204ENST00000427724 CNFNQ9BYD5 112 aa7.79□□□□□ -1.16
TCOF1-204ENST00000427724 INAFM2P0DMQ5 153 aa7.79□□□□□ -1.16
TCOF1-204ENST00000427724 CEMP1Q6PRD7 247 aaPredicted RBP7.79□□□□□ -1.16
TCOF1-204ENST00000427724 ITPR2Q14571 2701 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 TACC2O95359 2948 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 BAALC-AS2P0C853 105 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 IGKV3D-7A0A0C4DH55 119 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 J3KT08 172 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 COX7A2LO14548 114 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 SLC25A29Q8N8R3 303 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 TIMM17AQ99595 171 aa7.78□□□□□ -1.16
TCOF1-204ENST00000427724 CRIP2P52943 208 aaPredicted RBP7.77□□□□□ -1.17
TCOF1-204ENST00000427724 TINCRA0A1B0GVN0 87 aa7.77□□□□□ -1.17
TCOF1-204ENST00000427724 HIGD2BQ4VC39 106 aa7.77□□□□□ -1.17
TCOF1-204ENST00000427724 TIRAPP58753 221 aa7.76□□□□□ -1.17
TCOF1-204ENST00000427724 DNAJC30Q96LL9 226 aa7.76□□□□□ -1.17
TCOF1-204ENST00000427724 H3BT86 120 aa7.76□□□□□ -1.17
TCOF1-204ENST00000427724 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
TCOF1-204ENST00000427724 A0A1B0GX51 115 aa7.76□□□□□ -1.17
TCOF1-204ENST00000427724 DCANP1Q8TF63 244 aa7.76□□□□□ -1.17
TCOF1-204ENST00000427724 UTP20O75691 2785 aaKnown RBP7.75□□□□□ -1.17
TCOF1-204ENST00000427724 TRIAP1O43715 76 aa7.75□□□□□ -1.17
TCOF1-204ENST00000427724 LINC00269Q8N2A0 174 aa7.75□□□□□ -1.17
TCOF1-204ENST00000427724 F8WEM9 126 aa7.75□□□□□ -1.17
TCOF1-204ENST00000427724 C20orf203Q8NBC4 194 aa7.75□□□□□ -1.17
TCOF1-204ENST00000427724 Q9H8V8 135 aa7.75□□□□□ -1.17
TCOF1-204ENST00000427724 M0QXV9 152 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 C14orf177Q52M58 125 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 TRBV10-1A0A0K0K1A3 114 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 COX8CQ7Z4L0 72 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 PKIGQ9Y2B9 76 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
TCOF1-204ENST00000427724 ACYP1P07311 99 aa7.74□□□□□ -1.17
TCOF1-204ENST00000427724 SMCPP49901 116 aaPredicted RBP7.73□□□□□ -1.17
TCOF1-204ENST00000427724 SBSPONQ8IVN8 264 aa7.73□□□□□ -1.17
TCOF1-204ENST00000427724 UBE2D1P51668 147 aa7.73□□□□□ -1.17
TCOF1-204ENST00000427724 HERVK_113P63121 156 aa7.73□□□□□ -1.17
TCOF1-204ENST00000427724 FHL3Q13643 280 aa7.73□□□□□ -1.17
TCOF1-204ENST00000427724 SOCS3O14543 225 aa7.73□□□□□ -1.17
TCOF1-204ENST00000427724 Q8N2B8 174 aa7.73□□□□□ -1.17
TCOF1-204ENST00000427724 IGHV4-4A0A075B6R2 117 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 ODF3Q96PU9 254 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 PRO0461Q9UI25 63 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 UBE2D3P61077 147 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 UBE2D2P62837 147 aa7.72□□□□□ -1.17
TCOF1-204ENST00000427724 WWC2-AS2Q96NR7 200 aa7.71□□□□□ -1.17
TCOF1-204ENST00000427724 NSD1Q96L73 2696 aaPredicted RBP7.71□□□□□ -1.17
TCOF1-204ENST00000427724 ITPR1Q14643 2758 aa7.71□□□□□ -1.18
TCOF1-204ENST00000427724 ATOX1O00244 68 aa7.71□□□□□ -1.18
TCOF1-204ENST00000427724 NDUFA1O15239 70 aa7.71□□□□□ -1.18
TCOF1-204ENST00000427724 FSHBP01225 129 aa7.71□□□□□ -1.18
TCOF1-204ENST00000427724 GHRHP01286 108 aa7.71□□□□□ -1.18
TCOF1-204ENST00000427724 REG3AQ06141 175 aa7.71□□□□□ -1.18
TCOF1-204ENST00000427724 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 hADV29S1A0JD25 119 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 UQCRQO14949 82 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 LINC00694P0DN24 101 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 LINC00643Q86TS7 51 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 M0QY20 66 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 KRTAP1-3Q8IUG1 177 aa7.7□□□□□ -1.18
TCOF1-204ENST00000427724 ASH1LQ9NR48 2969 aaKnown RBP7.7□□□□□ -1.18
TCOF1-204ENST00000427724 A0A096LNT2 108 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 ZNF22P17026 224 aaPredicted RBP7.69□□□□□ -1.18
TCOF1-204ENST00000427724 POLR2KP53803 58 aaKnown RBP7.69□□□□□ -1.18
TCOF1-204ENST00000427724 MUC7Q8TAX7 377 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 C5orf47Q569G3 176 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 SPANXDQ9BXN6 97 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 LAMTOR3Q9UHA4 124 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 ZNF580Q9UK33 172 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 A8MZ25 164 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 C3orf22Q8N5N4 141 aa7.69□□□□□ -1.18
TCOF1-204ENST00000427724 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 KLLNB2CW77 178 aa7.68□□□□□ -1.18
TCOF1-204ENST00000427724 CDK2AP2O75956 126 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms