RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 IBA57-AS1B1ANH7 110 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 H3BRM9 83 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 CASC10Q5T4H9 136 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 PMCHL2Q9BQD1 86 aa7.01□□□□□ -1.29
MDC1-205ENST00000425072 HERVK_113P61574 105 aa7□□□□□ -1.29
MDC1-205ENST00000425072 TMEM170BQ5T4T1 132 aa7□□□□□ -1.29
MDC1-205ENST00000425072 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
MDC1-205ENST00000425072 UBE2WQ96B02 151 aa7□□□□□ -1.29
MDC1-205ENST00000425072 RMI2Q96E14 147 aa7□□□□□ -1.29
MDC1-205ENST00000425072 IGLV4-69A0A075B6H9 119 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 C11orf86A6NJI1 115 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
MDC1-205ENST00000425072 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 ENHOQ6UWT2 76 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 CHAC1Q9BUX1 264 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 VAMP8Q9BV40 100 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 COX11Q9Y6N1 276 aa6.99□□□□□ -1.29
MDC1-205ENST00000425072 TTC32Q5I0X7 151 aa6.98□□□□□ -1.29
MDC1-205ENST00000425072 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
MDC1-205ENST00000425072 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
MDC1-205ENST00000425072 LINC00469Q8N7U9 141 aa6.98□□□□□ -1.29
MDC1-205ENST00000425072 CHCHD10Q8WYQ3 142 aaPredicted RBP6.98□□□□□ -1.29
MDC1-205ENST00000425072 SACSQ9NZJ4 4579 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
MDC1-205ENST00000425072 PCLOQ9Y6V0 5065 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 IGLV5-45A0A087WSX0 123 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 IGHV3OR16-9A0A0B4J2B5 98 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 COX6A2Q02221 97 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 LINC00518Q8N0U6 118 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 Q8N3U1 123 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 C12orf57Q99622 126 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 C1orf43Q9BWL3 253 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 CDKN2A-AS1Q9UH64 79 aa6.97□□□□□ -1.29
MDC1-205ENST00000425072 TENM2Q9NT68 2774 aa6.96□□□□□ -1.3
MDC1-205ENST00000425072 A0A087WZ39 114 aa6.96□□□□□ -1.3
MDC1-205ENST00000425072 APOMO95445 188 aa6.96□□□□□ -1.3
MDC1-205ENST00000425072 ZNF22P17026 224 aaPredicted RBP6.96□□□□□ -1.3
MDC1-205ENST00000425072 XCL1P47992 114 aa6.96□□□□□ -1.3
MDC1-205ENST00000425072 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
MDC1-205ENST00000425072 STPG4Q8N801 248 aa6.96□□□□□ -1.3
MDC1-205ENST00000425072 IGLV10-54A0A075B6I4 117 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 NBDYA0A0U1RRE5 68 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 hDV102S1A0JD36 115 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 TMEM223A0PJW6 202 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 E9PLD3 99 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 COX7A2LO14548 114 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 MALP21145 153 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
MDC1-205ENST00000425072 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 GAGE12HA6NDE8 117 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 LEPROTO15243 131 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 LY6G6CO95867 125 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 SPATA45Q537H7 98 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 PAM16Q9Y3D7 125 aa6.94□□□□□ -1.3
MDC1-205ENST00000425072 Q9HAA7 133 aa6.93□□□□□ -1.3
MDC1-205ENST00000425072 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
MDC1-205ENST00000425072 FOXI1Q12951 378 aa6.92□□□□□ -1.3
MDC1-205ENST00000425072 MAJINQ3KP22 176 aa6.92□□□□□ -1.3
MDC1-205ENST00000425072 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
MDC1-205ENST00000425072 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
MDC1-205ENST00000425072 HERC2O95714 4834 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 IGHV3-64A0A075B6Q5 118 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 J3QQQ9 107 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 PRSS2P07478 247 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 LGALS3P17931 250 aaKnown RBP6.91□□□□□ -1.3
MDC1-205ENST00000425072 NMUP48645 174 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 SFTA2Q6UW10 78 aa6.91□□□□□ -1.3
MDC1-205ENST00000425072 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 TSTD3H0UI37 97 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 DLEU1O43261 78 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 PSCAO43653 123 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 COX8AP10176 69 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 KRTAP26-1Q6PEX3 210 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.3
MDC1-205ENST00000425072 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 LINC00587B1AMM8 73 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 F8WDY8 70 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 Q8IZM0 81 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 C14orf144Q96I85 54 aa6.89□□□□□ -1.31
MDC1-205ENST00000425072 DNAH7Q8WXX0 4024 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 M0R2N4 97 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 CKS1BP61024 79 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 ORAOV1Q8WV07 137 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
MDC1-205ENST00000425072 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms