RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
PDGFC-202ENST00000422544 TIMM17AQ99595 171 aa6.1□□□□□ -1.43
PDGFC-202ENST00000422544 NPSP0C0P6 89 aa6.09□□□□□ -1.43
PDGFC-202ENST00000422544 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
PDGFC-202ENST00000422544 AMELXQ99217 191 aa6.09□□□□□ -1.43
PDGFC-202ENST00000422544 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.08□□□□□ -1.44
PDGFC-202ENST00000422544 LINC01549A6NIU2 74 aa6.08□□□□□ -1.44
PDGFC-202ENST00000422544 HBDP02042 147 aa6.08□□□□□ -1.44
PDGFC-202ENST00000422544 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
PDGFC-202ENST00000422544 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
PDGFC-202ENST00000422544 C2orf88Q9BSF0 95 aa6.08□□□□□ -1.44
PDGFC-202ENST00000422544 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
PDGFC-202ENST00000422544 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 C16orf90A8MZG2 172 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.07□□□□□ -1.44
PDGFC-202ENST00000422544 NUPR1O60356 82 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HSBP1O75506 76 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 SERF1AO75920 110 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 PRSS1P07477 247 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 UBE2D1P51668 147 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 LINC00310P59036 64 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 COX6A2Q02221 97 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 C14orf177Q52M58 125 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 PDZD11Q5EBL8 140 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
PDGFC-202ENST00000422544 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 CFAP161Q6P656 301 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 C5orf38Q86SI9 138 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
PDGFC-202ENST00000422544 hDV102S1A0JD36 115 aa6.06□□□□□ -1.44
PDGFC-202ENST00000422544 COX7A2LO14548 114 aa6.06□□□□□ -1.44
PDGFC-202ENST00000422544 NDUFA6P56556 154 aa6.06□□□□□ -1.44
PDGFC-202ENST00000422544 HIGD2BQ4VC39 106 aa6.06□□□□□ -1.44
PDGFC-202ENST00000422544 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
PDGFC-202ENST00000422544 NTN5Q8WTR8 489 aaPredicted RBP6.06□□□□□ -1.44
PDGFC-202ENST00000422544 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
PDGFC-202ENST00000422544 IGHV3OR16-9A0A0B4J2B5 98 aa6.05□□□□□ -1.44
PDGFC-202ENST00000422544 ATP5LO75964 103 aa6.05□□□□□ -1.44
PDGFC-202ENST00000422544 MALP21145 153 aa6.05□□□□□ -1.44
PDGFC-202ENST00000422544 PMVKQ15126 192 aa6.05□□□□□ -1.44
PDGFC-202ENST00000422544 CDPF1Q6NVV7 123 aa6.05□□□□□ -1.44
PDGFC-202ENST00000422544 DMBT1Q9UGM3 2413 aaPredicted RBP6.05□□□□□ -1.44
PDGFC-202ENST00000422544 IGHV1-58A0A0C4DH39 117 aa6.04□□□□□ -1.44
PDGFC-202ENST00000422544 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
PDGFC-202ENST00000422544 SLPIP03973 132 aa6.04□□□□□ -1.44
PDGFC-202ENST00000422544 GCSHP23434 173 aa6.04□□□□□ -1.44
PDGFC-202ENST00000422544 LINC01620Q4KN68 170 aa6.04□□□□□ -1.44
PDGFC-202ENST00000422544 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
PDGFC-202ENST00000422544 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
PDGFC-202ENST00000422544 GVQW2A0A096LPI5 108 aaPredicted RBP6.03□□□□□ -1.44
PDGFC-202ENST00000422544 KRTAP10-1P60331 282 aa6.03□□□□□ -1.44
PDGFC-202ENST00000422544 FAM19A3Q7Z5A8 133 aa6.03□□□□□ -1.44
PDGFC-202ENST00000422544 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
PDGFC-202ENST00000422544 GEMIN7Q9H840 131 aaKnown RBP6.03□□□□□ -1.44
PDGFC-202ENST00000422544 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 A0A087WZ39 114 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 LEPROTL1O95214 131 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 APOMO95445 188 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 FABP4P15090 132 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 HERVK_113P63121 156 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 SEC11AP67812 179 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 CDKN2A-AS1Q9UH64 79 aa6.02□□□□□ -1.45
PDGFC-202ENST00000422544 IGHV3-64A0A075B6Q5 118 aa6.01□□□□□ -1.45
PDGFC-202ENST00000422544 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
PDGFC-202ENST00000422544 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
PDGFC-202ENST00000422544 CNBPP62633 177 aaKnown RBP6.01□□□□□ -1.45
PDGFC-202ENST00000422544 ORAOV1Q8WV07 137 aa6.01□□□□□ -1.45
PDGFC-202ENST00000422544 IGLV4-69A0A075B6H9 119 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 IGLC3P0DOY3 106 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 SPAG11BQ08648 103 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 COA6Q5JTJ3 125 aaKnown RBP6□□□□□ -1.45
PDGFC-202ENST00000422544 LINC01561Q8N1V8 128 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 LINC00469Q8N7U9 141 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 C9orf163Q8N9P6 203 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 HSPB8Q9UJY1 196 aa6□□□□□ -1.45
PDGFC-202ENST00000422544 CHTOPQ9Y3Y2 248 aaKnown RBP6□□□□□ -1.45
PDGFC-202ENST00000422544 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
PDGFC-202ENST00000422544 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
PDGFC-202ENST00000422544 H0Y8G0 127 aa5.99□□□□□ -1.45
PDGFC-202ENST00000422544 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
PDGFC-202ENST00000422544 OR10D4PQ8NGN7 298 aa5.99□□□□□ -1.45
PDGFC-202ENST00000422544 PACRGQ96M98 296 aaPredicted RBP5.99□□□□□ -1.45
PDGFC-202ENST00000422544 CHAC1Q9BUX1 264 aa5.99□□□□□ -1.45
PDGFC-202ENST00000422544 IGLV5-45A0A087WSX0 123 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 C11orf86A6NJI1 115 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 SYCNQ0VAF6 134 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 KIAA0087Q14695 138 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 C2orf48Q96LS8 159 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 CARD19Q96LW7 228 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms