RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.5
PKP4-204ENST00000421462 HIST1H4AP62805 103 aaKnown RBP11.9□□□□□ -0.5
PKP4-204ENST00000421462 LRRK2Q5S007 2527 aa11.9□□□□□ -0.51
PKP4-204ENST00000421462 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.51
PKP4-204ENST00000421462 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
PKP4-204ENST00000421462 CACNA1AO00555 2505 aa11.89□□□□□ -0.51
PKP4-204ENST00000421462 LECT2O14960 151 aa11.89□□□□□ -0.51
PKP4-204ENST00000421462 NBL1P41271 181 aa11.89□□□□□ -0.51
PKP4-204ENST00000421462 C5orf38Q86SI9 138 aa11.89□□□□□ -0.51
PKP4-204ENST00000421462 COPS9Q8WXC6 57 aa11.89□□□□□ -0.51
PKP4-204ENST00000421462 J3KT08 172 aa11.88□□□□□ -0.51
PKP4-204ENST00000421462 SMIM11BQ8TCY0 68 aa11.88□□□□□ -0.51
PKP4-204ENST00000421462 LINC00846Q9NV44 126 aa11.88□□□□□ -0.51
PKP4-204ENST00000421462 UBE2L6O14933 153 aa11.88□□□□□ -0.51
PKP4-204ENST00000421462 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
PKP4-204ENST00000421462 C10orf105Q8TEF2 133 aa11.88□□□□□ -0.51
PKP4-204ENST00000421462 RNASE1P07998 156 aaKnown RBP11.87□□□□□ -0.51
PKP4-204ENST00000421462 C11orf72Q8NBR9 251 aa11.87□□□□□ -0.51
PKP4-204ENST00000421462 WFDC9Q8NEX5 89 aa11.87□□□□□ -0.51
PKP4-204ENST00000421462 C2orf48Q96LS8 159 aa11.87□□□□□ -0.51
PKP4-204ENST00000421462 NF1P21359 2839 aa11.87□□□□□ -0.51
PKP4-204ENST00000421462 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
PKP4-204ENST00000421462 ATOX1O00244 68 aa11.86□□□□□ -0.51
PKP4-204ENST00000421462 PAX4O43316 350 aa11.86□□□□□ -0.51
PKP4-204ENST00000421462 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
PKP4-204ENST00000421462 DYNLRB2Q8TF09 96 aa11.86□□□□□ -0.51
PKP4-204ENST00000421462 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
PKP4-204ENST00000421462 Q6ZTI0 123 aa11.86□□□□□ -0.51
PKP4-204ENST00000421462 TRAV13-2A0A0B4J235 113 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 ABCA12Q86UK0 2595 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 IGKV2-28A0A075B6P5 120 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 IGKV2D-28P01615 120 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 TEX15Q9BXT5 2789 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 TMEM89A2RUT3 159 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 GNLYP22749 145 aa11.85□□□□□ -0.51
PKP4-204ENST00000421462 CXCL5P42830 114 aa11.84□□□□□ -0.51
PKP4-204ENST00000421462 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
PKP4-204ENST00000421462 F5H768 121 aa11.84□□□□□ -0.51
PKP4-204ENST00000421462 INSP01308 110 aa11.84□□□□□ -0.51
PKP4-204ENST00000421462 MAP6D1Q9H9H5 199 aa11.84□□□□□ -0.51
PKP4-204ENST00000421462 CDC42SE2Q9NRR3 84 aa11.84□□□□□ -0.51
PKP4-204ENST00000421462 RPL18AQ02543 176 aaKnown RBP11.83□□□□□ -0.52
PKP4-204ENST00000421462 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
PKP4-204ENST00000421462 SMIM9A6NGZ8 99 aa11.83□□□□□ -0.52
PKP4-204ENST00000421462 CCDC168Q8NDH2 2452 aa11.82□□□□□ -0.52
PKP4-204ENST00000421462 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
PKP4-204ENST00000421462 RNF152Q8N8N0 203 aa11.82□□□□□ -0.52
PKP4-204ENST00000421462 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
PKP4-204ENST00000421462 HILS1P60008 231 aa11.81□□□□□ -0.52
PKP4-204ENST00000421462 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
PKP4-204ENST00000421462 UCNP55089 124 aa11.81□□□□□ -0.52
PKP4-204ENST00000421462 CCL18P55774 89 aa11.8□□□□□ -0.52
PKP4-204ENST00000421462 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
PKP4-204ENST00000421462 B4DSR2 109 aa11.8□□□□□ -0.52
PKP4-204ENST00000421462 CRYGAP11844 174 aa11.8□□□□□ -0.52
PKP4-204ENST00000421462 NOP10Q9NPE3 64 aaKnown RBP11.8□□□□□ -0.52
PKP4-204ENST00000421462 K7EQD1 137 aa11.8□□□□□ -0.52
PKP4-204ENST00000421462 LRRC75A-AS1Q8N1F1 130 aa11.8□□□□□ -0.52
PKP4-204ENST00000421462 NBEAL2Q6ZNJ1 2754 aa11.79□□□□□ -0.52
PKP4-204ENST00000421462 USP17L23D6RBM5 183 aa11.79□□□□□ -0.52
PKP4-204ENST00000421462 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 CFAP46Q8IYW2 2715 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 PLA2G2AP14555 144 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 STHQ8IWL8 128 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 TMEM243Q9BU79 118 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 TRAV23DV6A0A075B6W5 121 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 C5orf47Q569G3 176 aa11.78□□□□□ -0.52
PKP4-204ENST00000421462 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
PKP4-204ENST00000421462 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
PKP4-204ENST00000421462 PRORYQ9H606 182 aa11.77□□□□□ -0.53
PKP4-204ENST00000421462 SERP2Q8N6R1 65 aa11.76□□□□□ -0.53
PKP4-204ENST00000421462 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
PKP4-204ENST00000421462 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
PKP4-204ENST00000421462 C1orf158Q8N1D5 194 aa11.75□□□□□ -0.53
PKP4-204ENST00000421462 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
PKP4-204ENST00000421462 CLPSL2Q6UWE3 100 aa11.75□□□□□ -0.53
PKP4-204ENST00000421462 DPH3Q96FX2 82 aa11.74□□□□□ -0.53
PKP4-204ENST00000421462 PF4P02776 101 aa11.74□□□□□ -0.53
PKP4-204ENST00000421462 C4orf26Q17RF5 130 aa11.73□□□□□ -0.53
PKP4-204ENST00000421462 ZNF702PQ9H963 129 aa11.73□□□□□ -0.53
PKP4-204ENST00000421462 OXTP01178 125 aa11.73□□□□□ -0.53
PKP4-204ENST00000421462 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
PKP4-204ENST00000421462 FAM19A1Q7Z5A9 133 aa11.73□□□□□ -0.53
PKP4-204ENST00000421462 PKD1L2Q7Z442 2459 aa11.72□□□□□ -0.53
PKP4-204ENST00000421462 Q6JHZ5 121 aa11.72□□□□□ -0.53
PKP4-204ENST00000421462 H0YGX0 51 aa11.72□□□□□ -0.53
PKP4-204ENST00000421462 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
PKP4-204ENST00000421462 ORMDL1Q9P0S3 153 aa11.71□□□□□ -0.53
PKP4-204ENST00000421462 ODF3L2Q3SX64 289 aa11.71□□□□□ -0.53
PKP4-204ENST00000421462 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
PKP4-204ENST00000421462 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
PKP4-204ENST00000421462 GCN1Q92616 2671 aaKnown RBP11.71□□□□□ -0.54
PKP4-204ENST00000421462 TRGV4A0A0C4DH28 118 aa11.71□□□□□ -0.54
PKP4-204ENST00000421462 GHRHP01286 108 aa11.71□□□□□ -0.54
PKP4-204ENST00000421462 XCL1P47992 114 aa11.71□□□□□ -0.54
PKP4-204ENST00000421462 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.54
PKP4-204ENST00000421462 OVOL2Q9BRP0 275 aa11.71□□□□□ -0.54
PKP4-204ENST00000421462 RPL35AP18077 110 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms