RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 IGIPA6NJ69 53 aa13.01□□□□□ -0.33
PKNOX1-202ENST00000418336 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-202ENST00000418336 C2orf66Q6UXQ4 117 aa13.01□□□□□ -0.33
PKNOX1-202ENST00000418336 Q6ZRU5 148 aa13.01□□□□□ -0.33
PKNOX1-202ENST00000418336 CARD19Q96LW7 228 aa13.01□□□□□ -0.33
PKNOX1-202ENST00000418336 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
PKNOX1-202ENST00000418336 K7EMI3 77 aa13□□□□□ -0.33
PKNOX1-202ENST00000418336 SYCNQ0VAF6 134 aa13□□□□□ -0.33
PKNOX1-202ENST00000418336 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
PKNOX1-202ENST00000418336 MALP21145 153 aa12.99□□□□□ -0.33
PKNOX1-202ENST00000418336 RPL37AP61513 92 aaKnown RBP12.99□□□□□ -0.33
PKNOX1-202ENST00000418336 RHEBQ15382 184 aa12.99□□□□□ -0.33
PKNOX1-202ENST00000418336 LINC00242Q5T6M2 205 aa12.99□□□□□ -0.33
PKNOX1-202ENST00000418336 AMELXQ99217 191 aa12.99□□□□□ -0.33
PKNOX1-202ENST00000418336 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 ZNF561-AS1K7EIQ3 104 aa12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 ORMDL2Q53FV1 153 aa12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 ZC2HC1BQ5TFG8 222 aa12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 TMEM141Q96I45 108 aa12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 C2orf48Q96LS8 159 aa12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 NXT2Q9NPJ8 142 aaKnown RBP12.98□□□□□ -0.33
PKNOX1-202ENST00000418336 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
PKNOX1-202ENST00000418336 ALKBH7Q9BT30 221 aaPredicted RBP12.97□□□□□ -0.33
PKNOX1-202ENST00000418336 CYSLTR1Q9Y271 337 aa12.97□□□□□ -0.33
PKNOX1-202ENST00000418336 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
PKNOX1-202ENST00000418336 NPSP0C0P6 89 aa12.96□□□□□ -0.33
PKNOX1-202ENST00000418336 UBE2D1P51668 147 aa12.96□□□□□ -0.33
PKNOX1-202ENST00000418336 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.33
PKNOX1-202ENST00000418336 OR10D4PQ8NGN7 298 aa12.96□□□□□ -0.33
PKNOX1-202ENST00000418336 S100PP25815 95 aa12.95□□□□□ -0.34
PKNOX1-202ENST00000418336 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
PKNOX1-202ENST00000418336 MAJINQ3KP22 176 aa12.95□□□□□ -0.34
PKNOX1-202ENST00000418336 RPS10P5Q9NQ39 176 aa12.95□□□□□ -0.34
PKNOX1-202ENST00000418336 A0A087WZ39 114 aa12.94□□□□□ -0.34
PKNOX1-202ENST00000418336 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-202ENST00000418336 KIAA0087Q14695 138 aa12.94□□□□□ -0.34
PKNOX1-202ENST00000418336 TOMM6Q96B49 74 aa12.94□□□□□ -0.34
PKNOX1-202ENST00000418336 APOMO95445 188 aa12.93□□□□□ -0.34
PKNOX1-202ENST00000418336 STPG4Q8N801 248 aa12.93□□□□□ -0.34
PKNOX1-202ENST00000418336 CAMK2N2Q96S95 79 aa12.93□□□□□ -0.34
PKNOX1-202ENST00000418336 PTTG1IPP53801 180 aa12.92□□□□□ -0.34
PKNOX1-202ENST00000418336 TEX43Q6ZNM6 134 aa12.92□□□□□ -0.34
PKNOX1-202ENST00000418336 ORAOV1Q8WV07 137 aa12.92□□□□□ -0.34
PKNOX1-202ENST00000418336 TGIF2-C20orf24A0A0A6YYL0 155 aa12.91□□□□□ -0.34
PKNOX1-202ENST00000418336 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
PKNOX1-202ENST00000418336 COX19Q49B96 90 aa12.91□□□□□ -0.34
PKNOX1-202ENST00000418336 C10orf25Q5T742 122 aa12.91□□□□□ -0.34
PKNOX1-202ENST00000418336 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
PKNOX1-202ENST00000418336 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
PKNOX1-202ENST00000418336 TNXBP22105 4242 aa12.9□□□□□ -0.34
PKNOX1-202ENST00000418336 MT-ND6P03923 174 aa12.9□□□□□ -0.34
PKNOX1-202ENST00000418336 YPEL4Q96NS1 127 aa12.9□□□□□ -0.34
PKNOX1-202ENST00000418336 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
PKNOX1-202ENST00000418336 A0A0J9YXV3 536 aa12.89□□□□□ -0.35
PKNOX1-202ENST00000418336 LOC107984640A0A0U1RRK4 108 aa12.89□□□□□ -0.35
PKNOX1-202ENST00000418336 DPH3Q96FX2 82 aa12.89□□□□□ -0.35
PKNOX1-202ENST00000418336 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-202ENST00000418336 LINC00474Q9P2X8 69 aa12.89□□□□□ -0.35
PKNOX1-202ENST00000418336 F8WDY8 70 aa12.88□□□□□ -0.35
PKNOX1-202ENST00000418336 APOC3P02656 99 aa12.88□□□□□ -0.35
PKNOX1-202ENST00000418336 LINC01561Q8N1V8 128 aa12.88□□□□□ -0.35
PKNOX1-202ENST00000418336 URB1-AS1Q96HZ7 61 aa12.88□□□□□ -0.35
PKNOX1-202ENST00000418336 A0A1W2PNN7 141 aa12.87□□□□□ -0.35
PKNOX1-202ENST00000418336 UNQ6190/PRO20217Q6UXQ8 127 aa12.87□□□□□ -0.35
PKNOX1-202ENST00000418336 VCX2Q9H322 139 aa12.87□□□□□ -0.35
PKNOX1-202ENST00000418336 C6orf48Q9UBA6 75 aa12.87□□□□□ -0.35
PKNOX1-202ENST00000418336 PKIGQ9Y2B9 76 aa12.87□□□□□ -0.35
PKNOX1-202ENST00000418336 FABP9Q0Z7S8 132 aa12.86□□□□□ -0.35
PKNOX1-202ENST00000418336 ERASQ7Z444 233 aa12.86□□□□□ -0.35
PKNOX1-202ENST00000418336 A0A096LNJ9 63 aa12.85□□□□□ -0.35
PKNOX1-202ENST00000418336 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
PKNOX1-202ENST00000418336 Q6ZN92 141 aa12.85□□□□□ -0.35
PKNOX1-202ENST00000418336 C2orf88Q9BSF0 95 aa12.85□□□□□ -0.35
PKNOX1-202ENST00000418336 TLX1NBP0CAT3 122 aa12.84□□□□□ -0.35
PKNOX1-202ENST00000418336 SVBPQ8N300 66 aa12.84□□□□□ -0.35
PKNOX1-202ENST00000418336 NDUFA1O15239 70 aa12.83□□□□□ -0.36
PKNOX1-202ENST00000418336 OXTP01178 125 aa12.83□□□□□ -0.36
PKNOX1-202ENST00000418336 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
PKNOX1-202ENST00000418336 SNAPINO95295 136 aa12.82□□□□□ -0.36
PKNOX1-202ENST00000418336 G0S2P27469 103 aa12.82□□□□□ -0.36
PKNOX1-202ENST00000418336 Q6ZRP5 223 aa12.82□□□□□ -0.36
PKNOX1-202ENST00000418336 C2orf82Q6UX34 121 aa12.81□□□□□ -0.36
PKNOX1-202ENST00000418336 C18orf32Q8TCD1 76 aa12.81□□□□□ -0.36
PKNOX1-202ENST00000418336 C7orf33Q8WU49 177 aa12.81□□□□□ -0.36
PKNOX1-202ENST00000418336 SCGB3A1Q96QR1 104 aa12.81□□□□□ -0.36
PKNOX1-202ENST00000418336 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
PKNOX1-202ENST00000418336 J3QL48 77 aa12.8□□□□□ -0.36
PKNOX1-202ENST00000418336 KRTAP7-1Q8IUC3 87 aa12.8□□□□□ -0.36
PKNOX1-202ENST00000418336 TRAPPC1Q9Y5R8 145 aa12.8□□□□□ -0.36
PKNOX1-202ENST00000418336 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
PKNOX1-202ENST00000418336 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
PKNOX1-202ENST00000418336 C9orf116Q5BN46 136 aaPredicted RBP12.79□□□□□ -0.36
PKNOX1-202ENST00000418336 PAPPA-AS1Q5QFB9 102 aa12.79□□□□□ -0.36
PKNOX1-202ENST00000418336 MT1HL1P0DM35 61 aa12.78□□□□□ -0.36
PKNOX1-202ENST00000418336 HERVK_113P63121 156 aa12.78□□□□□ -0.36
PKNOX1-202ENST00000418336 LINC01549A6NIU2 74 aa12.77□□□□□ -0.37
PKNOX1-202ENST00000418336 NDUFA5Q16718 116 aa12.77□□□□□ -0.37
PKNOX1-202ENST00000418336 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
PKNOX1-202ENST00000418336 CST9LQ9H4G1 147 aa12.77□□□□□ -0.37
PKNOX1-202ENST00000418336 TRBV30A0A0K0K1B3 111 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms