RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 CHCHD10Q8WYQ3 142 aaPredicted RBP5.36□□□□□ -1.55
MDC1-203ENST00000417033 PMCHL2Q9BQD1 86 aa5.36□□□□□ -1.55
MDC1-203ENST00000417033 CST9LQ9H4G1 147 aa5.36□□□□□ -1.55
MDC1-203ENST00000417033 TRAV8-3A0A0A6YYJ7 113 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 LECT2O14960 151 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 PRSS1P07477 247 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 NPSP0C0P6 89 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 C3orf79P0CE67 100 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 FOXI1Q12951 378 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 PMVKQ15126 192 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 MIAQ16674 131 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 C1orf134Q5TEV5 83 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 LYSTQ99698 3801 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 C1orf43Q9BWL3 253 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 HSPB8Q9UJY1 196 aa5.35□□□□□ -1.55
MDC1-203ENST00000417033 DNAH1Q9P2D7 4330 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 C11orf86A6NJI1 115 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 K7EP13 123 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 S100A2P29034 98 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 KRTDAPP60985 99 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 ODF1Q14990 250 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 SS18Q15532 418 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 C5orf38Q86SI9 138 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
MDC1-203ENST00000417033 MRPL35Q9NZE8 188 aaKnown RBP5.34□□□□□ -1.55
MDC1-203ENST00000417033 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
MDC1-203ENST00000417033 IGLC3P0DOY3 106 aa5.33□□□□□ -1.56
MDC1-203ENST00000417033 PAPPA-AS1Q5QFB9 102 aa5.33□□□□□ -1.56
MDC1-203ENST00000417033 PACRGQ96M98 296 aaPredicted RBP5.33□□□□□ -1.56
MDC1-203ENST00000417033 CHAC1Q9BUX1 264 aa5.33□□□□□ -1.56
MDC1-203ENST00000417033 CHTOPQ9Y3Y2 248 aaKnown RBP5.33□□□□□ -1.56
MDC1-203ENST00000417033 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
MDC1-203ENST00000417033 KMT2AQ03164 3969 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 TRAV12-1A0A0B4J245 112 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 TRAV8-4A0A0B4J246 113 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
MDC1-203ENST00000417033 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
MDC1-203ENST00000417033 FUSP35637 526 aaKnown RBP eCLIP5.32□□□□□ -1.56
MDC1-203ENST00000417033 CD164L2Q6UWJ8 174 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 OR10D4PQ8NGN7 298 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 RMI2Q96E14 147 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 MAP1LC3CQ9BXW4 147 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
MDC1-203ENST00000417033 HYDINQ4G0P3 5121 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 DNAH6Q9C0G6 4158 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 IGLV5-45A0A087WSX0 123 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 TINCRA0A1B0GVN0 87 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 LRCOL1A6NCL2 159 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 USP17L23D6RBM5 183 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 F8VRH5 84 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 PSCAO43653 123 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 HIGD2BQ4VC39 106 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 NFE4Q86UQ8 179 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 LINC00469Q8N7U9 141 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 C15orf56Q8N910 161 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 LINC00526Q96FQ7 95 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
MDC1-203ENST00000417033 SACSQ9NZJ4 4579 aa5.31□□□□□ -1.56
MDC1-203ENST00000417033 IGHV3-64A0A075B6Q5 118 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 COX7A2LO14548 114 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 SPINK8P0C7L1 97 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 HERVK_113P63121 156 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 LINC01545Q5VT33 79 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 PET117Q6UWS5 81 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 ATOH7Q8N100 152 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 RYR2Q92736 4967 aa5.3□□□□□ -1.56
MDC1-203ENST00000417033 A0A087WTM6 91 aa5.29□□□□□ -1.56
MDC1-203ENST00000417033 A0A087WZ39 114 aa5.29□□□□□ -1.56
MDC1-203ENST00000417033 SMIM1B2RUZ4 78 aa5.29□□□□□ -1.56
MDC1-203ENST00000417033 TMEM170BQ5T4T1 132 aa5.29□□□□□ -1.56
MDC1-203ENST00000417033 DPM2O94777 84 aa5.28□□□□□ -1.56
MDC1-203ENST00000417033 IGKCP01834 107 aa5.28□□□□□ -1.56
MDC1-203ENST00000417033 NTN5Q8WTR8 489 aaPredicted RBP5.28□□□□□ -1.56
MDC1-203ENST00000417033 ORAOV1Q8WV07 137 aa5.28□□□□□ -1.56
MDC1-203ENST00000417033 COX11Q9Y6N1 276 aa5.28□□□□□ -1.56
MDC1-203ENST00000417033 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.27□□□□□ -1.57
MDC1-203ENST00000417033 IGHV1-58A0A0C4DH39 117 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 SLPIP03973 132 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 MALP21145 153 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 SEC11AP67812 179 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 MAJINQ3KP22 176 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 STPG4Q8N801 248 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
MDC1-203ENST00000417033 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
MDC1-203ENST00000417033 IGLV5-39A0A0G2JS06 123 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 hDV102S1A0JD36 115 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 C9orf118A6NHY6 69 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 PLNP26678 52 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 KRTAP10-2P60368 255 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 KIAA0087Q14695 138 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 Q8N814 137 aa5.26□□□□□ -1.57
MDC1-203ENST00000417033 IGKV2D-26A0A0A0MRZ7 120 aa5.25□□□□□ -1.57
MDC1-203ENST00000417033 LOC105371267A0A1B0GV96 52 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms