RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 LINC00959A0A1B0GUT2 108 aa13.61□□□□□ -0.23
SHANK3-202ENST00000414786 IBA57-AS1B1ANH7 110 aa13.61□□□□□ -0.23
SHANK3-202ENST00000414786 C19orf71A6NCJ1 209 aa13.59□□□□□ -0.23
SHANK3-202ENST00000414786 LST1O00453 97 aa13.59□□□□□ -0.23
SHANK3-202ENST00000414786 MAPKAPK5-AS1Q8N8E1 139 aa13.59□□□□□ -0.23
SHANK3-202ENST00000414786 IGKV2D-30A0A075B6S6 120 aa13.59□□□□□ -0.23
SHANK3-202ENST00000414786 IGKV2-30P06310 120 aa13.59□□□□□ -0.23
SHANK3-202ENST00000414786 ZNF702PQ9H963 129 aa13.59□□□□□ -0.23
SHANK3-202ENST00000414786 LELP1Q5T871 98 aa13.58□□□□□ -0.23
SHANK3-202ENST00000414786 C1orf134Q5TEV5 83 aa13.58□□□□□ -0.24
SHANK3-202ENST00000414786 MUC6Q6W4X9 2439 aa13.58□□□□□ -0.24
SHANK3-202ENST00000414786 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
SHANK3-202ENST00000414786 V9GYY9 64 aa13.58□□□□□ -0.24
SHANK3-202ENST00000414786 REG3GQ6UW15 175 aa13.57□□□□□ -0.24
SHANK3-202ENST00000414786 LINC00474Q9P2X8 69 aa13.57□□□□□ -0.24
SHANK3-202ENST00000414786 CYSRT1A8MQ03 144 aa13.57□□□□□ -0.24
SHANK3-202ENST00000414786 LINC01547P58512 204 aaPredicted RBP13.57□□□□□ -0.24
SHANK3-202ENST00000414786 AGRNO00468 2067 aa13.57□□□□□ -0.24
SHANK3-202ENST00000414786 MRPS12O15235 138 aaKnown RBP13.56□□□□□ -0.24
SHANK3-202ENST00000414786 PYGO1Q9Y3Y4 419 aa13.56□□□□□ -0.24
SHANK3-202ENST00000414786 Q9UF83 564 aa13.56□□□□□ -0.24
SHANK3-202ENST00000414786 M0QY20 66 aa13.55□□□□□ -0.24
SHANK3-202ENST00000414786 ZNF73O43830 326 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-202ENST00000414786 UNQ6190/PRO20217Q6UXQ8 127 aa13.55□□□□□ -0.24
SHANK3-202ENST00000414786 TRBV6-4A0A1B0GX49 114 aa13.55□□□□□ -0.24
SHANK3-202ENST00000414786 ODF3BA8MYP8 253 aa13.55□□□□□ -0.24
SHANK3-202ENST00000414786 U3KQK5 164 aa13.55□□□□□ -0.24
SHANK3-202ENST00000414786 PSPHP1O15172 72 aa13.54□□□□□ -0.24
SHANK3-202ENST00000414786 H7C423 109 aa13.54□□□□□ -0.24
SHANK3-202ENST00000414786 Q6ZTC4 211 aa13.54□□□□□ -0.24
SHANK3-202ENST00000414786 DOPEY1Q5JWR5 2465 aa13.54□□□□□ -0.24
SHANK3-202ENST00000414786 EBI3Q14213 229 aa13.54□□□□□ -0.24
SHANK3-202ENST00000414786 C2orf48Q96LS8 159 aa13.53□□□□□ -0.24
SHANK3-202ENST00000414786 UQCRQO14949 82 aa13.53□□□□□ -0.24
SHANK3-202ENST00000414786 SPACA4Q8TDM5 124 aa13.53□□□□□ -0.24
SHANK3-202ENST00000414786 NUP210Q8TEM1 1887 aaPredicted RBP13.53□□□□□ -0.24
SHANK3-202ENST00000414786 COX6A2Q02221 97 aa13.53□□□□□ -0.24
SHANK3-202ENST00000414786 C1orf229Q6ZS94 237 aaPredicted RBP13.53□□□□□ -0.24
SHANK3-202ENST00000414786 CRYGAP11844 174 aa13.52□□□□□ -0.24
SHANK3-202ENST00000414786 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
SHANK3-202ENST00000414786 Q9BRP9 147 aa13.51□□□□□ -0.25
SHANK3-202ENST00000414786 HIVEP3Q5T1R4 2406 aa13.51□□□□□ -0.25
SHANK3-202ENST00000414786 SPRY4Q9C004 299 aa13.5□□□□□ -0.25
SHANK3-202ENST00000414786 KRTAP10-9P60411 292 aa13.5□□□□□ -0.25
SHANK3-202ENST00000414786 C7orf65Q6ZTY9 151 aa13.49□□□□□ -0.25
SHANK3-202ENST00000414786 NAV3Q8IVL0 2385 aa13.48□□□□□ -0.25
SHANK3-202ENST00000414786 PMAIP1Q13794 54 aa13.47□□□□□ -0.25
SHANK3-202ENST00000414786 A0A1B0GXF2 115 aa13.47□□□□□ -0.25
SHANK3-202ENST00000414786 KRTAP27-1Q3LI81 207 aa13.47□□□□□ -0.25
SHANK3-202ENST00000414786 CUL9Q8IWT3 2517 aa13.47□□□□□ -0.25
SHANK3-202ENST00000414786 CRIP1P50238 77 aa13.46□□□□□ -0.25
SHANK3-202ENST00000414786 MBD6Q96DN6 1003 aa13.46□□□□□ -0.25
SHANK3-202ENST00000414786 IGLV8-61A0A075B6I0 122 aa13.46□□□□□ -0.26
SHANK3-202ENST00000414786 TSHBP01222 138 aa13.46□□□□□ -0.26
SHANK3-202ENST00000414786 PRR9Q5T870 116 aa13.46□□□□□ -0.26
SHANK3-202ENST00000414786 NOTCH2Q04721 2471 aa13.45□□□□□ -0.26
SHANK3-202ENST00000414786 KIAA1549LQ6ZVL6 1849 aa13.45□□□□□ -0.26
SHANK3-202ENST00000414786 COL4A3Q01955 1670 aa13.45□□□□□ -0.26
SHANK3-202ENST00000414786 MRGPRG-AS1Q2M3A8 158 aa13.45□□□□□ -0.26
SHANK3-202ENST00000414786 TRBV10-3A0A0K0K1G6 114 aa13.44□□□□□ -0.26
SHANK3-202ENST00000414786 A8MTW9 85 aa13.44□□□□□ -0.26
SHANK3-202ENST00000414786 RNASE3P12724 160 aaKnown RBP13.43□□□□□ -0.26
SHANK3-202ENST00000414786 ODF3Q96PU9 254 aa13.43□□□□□ -0.26
SHANK3-202ENST00000414786 CEP192Q8TEP8 1941 aa13.42□□□□□ -0.26
SHANK3-202ENST00000414786 C1orf195Q5TG92 126 aa13.42□□□□□ -0.26
SHANK3-202ENST00000414786 TANC1Q9C0D5 1861 aa13.42□□□□□ -0.26
SHANK3-202ENST00000414786 A0A087WSZ3 146 aa13.41□□□□□ -0.26
SHANK3-202ENST00000414786 PSMG3-AS1Q96PY0 264 aa13.41□□□□□ -0.26
SHANK3-202ENST00000414786 HCG22E2RYF7 251 aa13.41□□□□□ -0.26
SHANK3-202ENST00000414786 CCDC179H3BU77 68 aa13.4□□□□□ -0.26
SHANK3-202ENST00000414786 GAS8-AS1O95177 125 aa13.4□□□□□ -0.26
SHANK3-202ENST00000414786 ABCA2Q9BZC7 2435 aa13.4□□□□□ -0.27
SHANK3-202ENST00000414786 RAI1Q7Z5J4 1906 aaPredicted RBP13.39□□□□□ -0.27
SHANK3-202ENST00000414786 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
SHANK3-202ENST00000414786 TRBV30A0A0K0K1B3 111 aa13.39□□□□□ -0.27
SHANK3-202ENST00000414786 RNF185Q96GF1 192 aa13.39□□□□□ -0.27
SHANK3-202ENST00000414786 SRCAPQ6ZRS2 3230 aa13.39□□□□□ -0.27
SHANK3-202ENST00000414786 BDP1A6H8Y1 2624 aa13.39□□□□□ -0.27
SHANK3-202ENST00000414786 H0Y9P7 68 aa13.39□□□□□ -0.27
SHANK3-202ENST00000414786 J3QL48 77 aa13.38□□□□□ -0.27
SHANK3-202ENST00000414786 CDSNQ15517 529 aa13.38□□□□□ -0.27
SHANK3-202ENST00000414786 ATP5EP2Q5VTU8 51 aa13.38□□□□□ -0.27
SHANK3-202ENST00000414786 NUP210LQ5VU65 1888 aa13.38□□□□□ -0.27
SHANK3-202ENST00000414786 A0A087WVE0 104 aa13.37□□□□□ -0.27
SHANK3-202ENST00000414786 CSDC2Q9Y534 153 aaKnown RBP13.37□□□□□ -0.27
SHANK3-202ENST00000414786 CHTF8P0CG12 524 aa13.36□□□□□ -0.27
SHANK3-202ENST00000414786 IGLV4-60A0A075B6I1 120 aa13.36□□□□□ -0.27
SHANK3-202ENST00000414786 AVPP01185 164 aa13.35□□□□□ -0.27
SHANK3-202ENST00000414786 A0A087WYN8 130 aa13.35□□□□□ -0.27
SHANK3-202ENST00000414786 LINC00575Q6W349 94 aa13.35□□□□□ -0.27
SHANK3-202ENST00000414786 LINC00694P0DN24 101 aa13.33□□□□□ -0.28
SHANK3-202ENST00000414786 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.31□□□□□ -0.28
SHANK3-202ENST00000414786 C11orf71Q6IPW1 123 aa13.31□□□□□ -0.28
SHANK3-202ENST00000414786 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
SHANK3-202ENST00000414786 NTM-AS1Q6ZSK4 140 aa13.3□□□□□ -0.28
SHANK3-202ENST00000414786 C11orf21Q9P2W6 132 aa13.3□□□□□ -0.28
SHANK3-202ENST00000414786 ALPK3Q96L96 1907 aa13.3□□□□□ -0.28
SHANK3-202ENST00000414786 CCDC168Q8NDH2 2452 aa13.3□□□□□ -0.28
SHANK3-202ENST00000414786 LINC00242Q5T6M2 205 aa13.3□□□□□ -0.28
SHANK3-202ENST00000414786 hDV103S1A0JD37 113 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms