RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 SERTAD4-AS1Q5TG53 156 aa13.05□□□□□ -0.32
LMBR1-203ENST00000414218 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
LMBR1-203ENST00000414218 CSDC2Q9Y534 153 aaKnown RBP13.05□□□□□ -0.32
LMBR1-203ENST00000414218 FAT3Q8TDW7 4589 aa13.05□□□□□ -0.32
LMBR1-203ENST00000414218 LINC01546A6NGU7 62 aa13.04□□□□□ -0.32
LMBR1-203ENST00000414218 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
LMBR1-203ENST00000414218 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
LMBR1-203ENST00000414218 G0S2P27469 103 aa13.03□□□□□ -0.32
LMBR1-203ENST00000414218 SS18Q15532 418 aa13.03□□□□□ -0.32
LMBR1-203ENST00000414218 MAJINQ3KP22 176 aa13.03□□□□□ -0.32
LMBR1-203ENST00000414218 ZNF664Q8N3J9 261 aa13.03□□□□□ -0.32
LMBR1-203ENST00000414218 TIMM21Q9BVV7 248 aa13.03□□□□□ -0.32
LMBR1-203ENST00000414218 IGHV1-58A0A0C4DH39 117 aa13.02□□□□□ -0.33
LMBR1-203ENST00000414218 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.33
LMBR1-203ENST00000414218 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.33
LMBR1-203ENST00000414218 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
LMBR1-203ENST00000414218 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
LMBR1-203ENST00000414218 SCO1O75880 301 aa13□□□□□ -0.33
LMBR1-203ENST00000414218 LINC01549A6NIU2 74 aa12.99□□□□□ -0.33
LMBR1-203ENST00000414218 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
LMBR1-203ENST00000414218 Q6ZRU5 148 aa12.99□□□□□ -0.33
LMBR1-203ENST00000414218 STPG4Q8N801 248 aa12.99□□□□□ -0.33
LMBR1-203ENST00000414218 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
LMBR1-203ENST00000414218 C7orf33Q8WU49 177 aa12.99□□□□□ -0.33
LMBR1-203ENST00000414218 A0A096LNI7 61 aa12.98□□□□□ -0.33
LMBR1-203ENST00000414218 TRGC2P03986 189 aa12.98□□□□□ -0.33
LMBR1-203ENST00000414218 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
LMBR1-203ENST00000414218 CARD19Q96LW7 228 aa12.97□□□□□ -0.33
LMBR1-203ENST00000414218 SPANXA1Q9NS26 97 aa12.97□□□□□ -0.33
LMBR1-203ENST00000414218 UBE2D4Q9Y2X8 147 aa12.97□□□□□ -0.33
LMBR1-203ENST00000414218 NPSP0C0P6 89 aa12.96□□□□□ -0.33
LMBR1-203ENST00000414218 RAB5BP61020 215 aa12.96□□□□□ -0.33
LMBR1-203ENST00000414218 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
LMBR1-203ENST00000414218 ZNF561-AS1K7EIQ3 104 aa12.95□□□□□ -0.34
LMBR1-203ENST00000414218 MT1HL1P0DM35 61 aa12.95□□□□□ -0.34
LMBR1-203ENST00000414218 MRPS36P82909 103 aaKnown RBP12.95□□□□□ -0.34
LMBR1-203ENST00000414218 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
LMBR1-203ENST00000414218 LINC00614P0C842 121 aa12.94□□□□□ -0.34
LMBR1-203ENST00000414218 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
LMBR1-203ENST00000414218 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
LMBR1-203ENST00000414218 CYSLTR1Q9Y271 337 aa12.94□□□□□ -0.34
LMBR1-203ENST00000414218 RPL39P62891 51 aaKnown RBP12.93□□□□□ -0.34
LMBR1-203ENST00000414218 LINC00474Q9P2X8 69 aa12.93□□□□□ -0.34
LMBR1-203ENST00000414218 TRAV13-1A0A0B4J241 112 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 COX7A2LO14548 114 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 MALP21145 153 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 C2orf66Q6UXQ4 117 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 Q6ZUT4 128 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 PLA2G2DQ9UNK4 145 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
LMBR1-203ENST00000414218 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
LMBR1-203ENST00000414218 TOMM6Q96B49 74 aa12.91□□□□□ -0.34
LMBR1-203ENST00000414218 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
LMBR1-203ENST00000414218 PRR3P79522 188 aaKnown RBP12.9□□□□□ -0.34
LMBR1-203ENST00000414218 FAM104AQ969W3 186 aa12.9□□□□□ -0.34
LMBR1-203ENST00000414218 CHCHD1Q96BP2 118 aaKnown RBP12.9□□□□□ -0.34
LMBR1-203ENST00000414218 IGIPA6NJ69 53 aa12.89□□□□□ -0.35
LMBR1-203ENST00000414218 C5orf38Q86SI9 138 aa12.89□□□□□ -0.35
LMBR1-203ENST00000414218 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
LMBR1-203ENST00000414218 PAPPA-AS1Q5QFB9 102 aa12.87□□□□□ -0.35
LMBR1-203ENST00000414218 ERASQ7Z444 233 aa12.87□□□□□ -0.35
LMBR1-203ENST00000414218 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
LMBR1-203ENST00000414218 PTTG1IPP53801 180 aa12.86□□□□□ -0.35
LMBR1-203ENST00000414218 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
LMBR1-203ENST00000414218 TMEM141Q96I45 108 aa12.86□□□□□ -0.35
LMBR1-203ENST00000414218 CAMK2N2Q96S95 79 aa12.86□□□□□ -0.35
LMBR1-203ENST00000414218 IGLV4-3A0A075B6K6 122 aa12.85□□□□□ -0.35
LMBR1-203ENST00000414218 BAGE3Q86Y29 109 aa12.84□□□□□ -0.35
LMBR1-203ENST00000414218 AMELXQ99217 191 aa12.84□□□□□ -0.35
LMBR1-203ENST00000414218 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
LMBR1-203ENST00000414218 A0A096LNJ9 63 aa12.83□□□□□ -0.36
LMBR1-203ENST00000414218 APOMO95445 188 aa12.83□□□□□ -0.36
LMBR1-203ENST00000414218 HBDP02042 147 aa12.83□□□□□ -0.36
LMBR1-203ENST00000414218 C2orf48Q96LS8 159 aa12.83□□□□□ -0.36
LMBR1-203ENST00000414218 SCGB3A1Q96QR1 104 aa12.83□□□□□ -0.36
LMBR1-203ENST00000414218 HMCN2Q8NDA2 5059 aa12.83□□□□□ -0.36
LMBR1-203ENST00000414218 Q6ZN92 141 aa12.82□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BKO60814 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BJP06899 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BOP23527 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BBP33778 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BDP58876 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BCP62807 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 SPAG11BQ08648 103 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST2H2BEQ16778 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 PDZD11Q5EBL8 140 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BHQ93079 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BNQ99877 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 HIST1H2BMQ99879 126 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 VCX2Q9H322 139 aa12.81□□□□□ -0.36
LMBR1-203ENST00000414218 A0A0J9YXV3 536 aa12.8□□□□□ -0.36
LMBR1-203ENST00000414218 A0A1W2PNN7 141 aa12.8□□□□□ -0.36
LMBR1-203ENST00000414218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
LMBR1-203ENST00000414218 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
LMBR1-203ENST00000414218 Q6ZRP5 223 aa12.79□□□□□ -0.36
LMBR1-203ENST00000414218 FAM19A3Q7Z5A8 133 aa12.79□□□□□ -0.36
LMBR1-203ENST00000414218 LINC01600Q96MT4 127 aa12.79□□□□□ -0.36
LMBR1-203ENST00000414218 IGHV3OR16-9A0A0B4J2B5 98 aa12.78□□□□□ -0.36
LMBR1-203ENST00000414218 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms