RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 IGHV3OR16-8A0A075B7F1 116 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 TRAV8-1A0A0A6YYK1 113 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 TRAV13-1A0A0B4J241 112 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 TRBV6-1A0A0K0K1D8 114 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 H3BT86 120 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 K7EIM0 57 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 RNASE2P10153 161 aaKnown RBP3.27□□□□□ -1.89
SF3B1-202ENST00000409915 C6orf99Q4VX62 202 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 TMEM61Q8N0U2 210 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 RPP21Q9H633 154 aaKnown RBP3.27□□□□□ -1.89
SF3B1-202ENST00000409915 MRPL36Q9P0J6 103 aaKnown RBP3.27□□□□□ -1.89
SF3B1-202ENST00000409915 EPDR1Q9UM22 224 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 KLK5Q9Y337 293 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-202ENST00000409915 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
SF3B1-202ENST00000409915 TRBV10-2A0A0K0K1G8 114 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 PGPA6NDG6 321 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 I3L2K1 104 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 K7EIL1 84 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 PSPHP1O15172 72 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 NDUFC2O95298 119 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 PYYP10082 97 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 MRPS36P82909 103 aaKnown RBP3.26□□□□□ -1.89
SF3B1-202ENST00000409915 ERHP84090 104 aaKnown RBP3.26□□□□□ -1.89
SF3B1-202ENST00000409915 EGFEM1PQ0D2K5 195 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 RBMY1FQ15415 496 aaKnown RBP3.26□□□□□ -1.89
SF3B1-202ENST00000409915 KLK9Q2XQG4 91 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 KPRPQ5T749 579 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-202ENST00000409915 UNQ9165/PRO28630Q6UXU0 137 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 SCGB1D4Q6XE38 83 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 ZFP2Q6ZN57 461 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 MGST2Q99735 147 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 DPH3P1Q9H4G8 78 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 KLK9Q9UKQ9 250 aa3.26□□□□□ -1.89
SF3B1-202ENST00000409915 IGHV3-49A0A0A0MS15 119 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 TRAV8-3A0A0A6YYJ7 113 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 TRBV7-1A0A0A6YYK4 115 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 IGHV3-74A0A0B4J1X5 117 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 PLAC8L1A1L4L8 177 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 INS-IGF2F8WCM5 200 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 H3BMM0 161 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 PEX7O00628 323 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 DAD1P61803 113 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 TWIST1Q15672 202 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 ADAMTSL4-AS1Q5T5F5 129 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 Q6ZRU5 148 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 NTN5Q8WTR8 489 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-202ENST00000409915 UBE2WQ96B02 151 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 FXYD5Q96DB9 178 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 LAMTOR3Q9UHA4 124 aa3.25□□□□□ -1.89
SF3B1-202ENST00000409915 TGP01266 2768 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 TRAV12-1A0A0B4J245 112 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 LOC389332A0A1B0GUA5 103 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 A0A1B0GUT8 65 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 hADV29S1A0JD25 119 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 IGLV1-51P01701 117 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 CTSGP08311 255 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 PLNP26678 52 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 FCER1GP30273 86 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-202ENST00000409915 UBE2L3P68036 154 aaKnown RBP3.24□□□□□ -1.89
SF3B1-202ENST00000409915 C2orf83Q53S99 150 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 FAM222AQ5U5X8 452 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 CEMP1Q6PRD7 247 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-202ENST00000409915 LINC00337Q8N6G1 96 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 Q8N8P6 123 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 OR8A1Q8NGG7 326 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 DYNLRB2Q8TF09 96 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 COPS9Q8WXC6 57 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 TMEM243Q9BU79 118 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 WFDC10AQ9H1F0 79 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
SF3B1-202ENST00000409915 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
SF3B1-202ENST00000409915 IGHV6-1A0A0B4J1U7 121 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 A0A0B4J2C4 111 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 LOC107984156A0A0G2JMH3 177 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 TRBV30A0A0K0K1B3 111 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 BCE1O60756 84 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 IGKV1-17P01599 117 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 IFI27P40305 119 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-202ENST00000409915 ATXN8Q156A1 80 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 ZNF56Q15929 161 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 PRR4Q16378 134 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 MIC13Q5XKP0 118 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 GTSCR1Q86UQ5 136 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 GPHB5Q86YW7 130 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 ARL17AQ8IVW1 177 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 FAM167A-AS1Q96KT0 104 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 DSCR8Q96T75 97 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 Q9H3A6 140 aa3.23□□□□□ -1.89
SF3B1-202ENST00000409915 NXT2Q9NPJ8 142 aaKnown RBP3.23□□□□□ -1.89
SF3B1-202ENST00000409915 IGKV3-7A0A075B6H7 116 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 222.1 ms