RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
NUP50-203ENST00000407019 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
NUP50-203ENST00000407019 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
NUP50-203ENST00000407019 LINC00308Q8TCZ7 52 aa11.87□□□□□ -0.51
NUP50-203ENST00000407019 LY6G6DO95868 133 aa11.87□□□□□ -0.51
NUP50-203ENST00000407019 COX6CP09669 75 aa11.87□□□□□ -0.51
NUP50-203ENST00000407019 RPL13AP40429 203 aaKnown RBP11.87□□□□□ -0.51
NUP50-203ENST00000407019 GAGE6Q13070 117 aa11.87□□□□□ -0.51
NUP50-203ENST00000407019 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
NUP50-203ENST00000407019 CRLF1O75462 422 aa11.86□□□□□ -0.51
NUP50-203ENST00000407019 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
NUP50-203ENST00000407019 HERV-K104P63124 156 aa11.85□□□□□ -0.51
NUP50-203ENST00000407019 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
NUP50-203ENST00000407019 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
NUP50-203ENST00000407019 MTORP42345 2549 aa11.85□□□□□ -0.51
NUP50-203ENST00000407019 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
NUP50-203ENST00000407019 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
NUP50-203ENST00000407019 DEFB130BP0DP73 79 aa11.84□□□□□ -0.51
NUP50-203ENST00000407019 DEFB130AP0DP74 79 aa11.84□□□□□ -0.51
NUP50-203ENST00000407019 SCGB1A1P11684 91 aa11.83□□□□□ -0.51
NUP50-203ENST00000407019 LINC00612Q8N6U2 182 aa11.83□□□□□ -0.51
NUP50-203ENST00000407019 CHCHD5Q9BSY4 110 aa11.83□□□□□ -0.51
NUP50-203ENST00000407019 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
NUP50-203ENST00000407019 ITPR2Q14571 2701 aa11.82□□□□□ -0.52
NUP50-203ENST00000407019 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
NUP50-203ENST00000407019 IGLV4-60A0A075B6I1 120 aa11.82□□□□□ -0.52
NUP50-203ENST00000407019 TRBV10-2A0A0K0K1G8 114 aa11.82□□□□□ -0.52
NUP50-203ENST00000407019 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
NUP50-203ENST00000407019 CDIP1Q9H305 208 aa11.82□□□□□ -0.52
NUP50-203ENST00000407019 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
NUP50-203ENST00000407019 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
NUP50-203ENST00000407019 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
NUP50-203ENST00000407019 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
NUP50-203ENST00000407019 X6R8D5 127 aa11.81□□□□□ -0.52
NUP50-203ENST00000407019 KMT2BQ9UMN6 2715 aaPredicted RBP11.81□□□□□ -0.52
NUP50-203ENST00000407019 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
NUP50-203ENST00000407019 C9orf66Q5T8R8 295 aa11.8□□□□□ -0.52
NUP50-203ENST00000407019 COX7B2Q8TF08 81 aa11.8□□□□□ -0.52
NUP50-203ENST00000407019 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
NUP50-203ENST00000407019 NTN5Q8WTR8 489 aaPredicted RBP11.79□□□□□ -0.52
NUP50-203ENST00000407019 CLEC2BQ92478 149 aa11.79□□□□□ -0.52
NUP50-203ENST00000407019 LST1O00453 97 aa11.79□□□□□ -0.52
NUP50-203ENST00000407019 PPDPFQ9H3Y8 114 aa11.79□□□□□ -0.52
NUP50-203ENST00000407019 GYPEP15421 78 aa11.78□□□□□ -0.52
NUP50-203ENST00000407019 IGHV3OR16-9A0A0B4J2B5 98 aa11.77□□□□□ -0.53
NUP50-203ENST00000407019 C2orf82Q6UX34 121 aa11.77□□□□□ -0.53
NUP50-203ENST00000407019 SPATA3Q8NHX4 192 aa11.77□□□□□ -0.53
NUP50-203ENST00000407019 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
NUP50-203ENST00000407019 INAFM1C9JVW0 142 aa11.76□□□□□ -0.53
NUP50-203ENST00000407019 H3BT86 120 aa11.76□□□□□ -0.53
NUP50-203ENST00000407019 HELZ2Q9BYK8 2649 aaKnown RBP11.76□□□□□ -0.53
NUP50-203ENST00000407019 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
NUP50-203ENST00000407019 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
NUP50-203ENST00000407019 A0A087WZ39 114 aa11.74□□□□□ -0.53
NUP50-203ENST00000407019 UBE2WQ96B02 151 aa11.74□□□□□ -0.53
NUP50-203ENST00000407019 FASNP49327 2511 aaKnown RBP11.74□□□□□ -0.53
NUP50-203ENST00000407019 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
NUP50-203ENST00000407019 FAM222AQ5U5X8 452 aa11.74□□□□□ -0.53
NUP50-203ENST00000407019 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
NUP50-203ENST00000407019 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
NUP50-203ENST00000407019 COX7A2LO14548 114 aa11.72□□□□□ -0.53
NUP50-203ENST00000407019 XGP55808 180 aa11.72□□□□□ -0.53
NUP50-203ENST00000407019 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
NUP50-203ENST00000407019 TEX49A0A1B0GTD5 131 aa11.72□□□□□ -0.53
NUP50-203ENST00000407019 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
NUP50-203ENST00000407019 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
NUP50-203ENST00000407019 MT-ATP8P03928 68 aa11.71□□□□□ -0.53
NUP50-203ENST00000407019 A0A1B0GUV1 79 aa11.71□□□□□ -0.54
NUP50-203ENST00000407019 PAX4O43316 350 aa11.71□□□□□ -0.54
NUP50-203ENST00000407019 DEFB135Q30KP9 77 aa11.71□□□□□ -0.54
NUP50-203ENST00000407019 APOC4P55056 127 aa11.7□□□□□ -0.54
NUP50-203ENST00000407019 LINC00158P58513 81 aa11.69□□□□□ -0.54
NUP50-203ENST00000407019 SS18Q15532 418 aa11.69□□□□□ -0.54
NUP50-203ENST00000407019 A0A096LPF7 62 aa11.69□□□□□ -0.54
NUP50-203ENST00000407019 TRAV13-2A0A0B4J235 113 aa11.69□□□□□ -0.54
NUP50-203ENST00000407019 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
NUP50-203ENST00000407019 CRPP02741 224 aa11.67□□□□□ -0.54
NUP50-203ENST00000407019 SND1-IT1Q9HBX3 110 aa11.67□□□□□ -0.54
NUP50-203ENST00000407019 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
NUP50-203ENST00000407019 DEFB4AO15263 64 aa11.67□□□□□ -0.54
NUP50-203ENST00000407019 XCL1P47992 114 aa11.67□□□□□ -0.54
NUP50-203ENST00000407019 IGHV4-28A0A0C4DH34 117 aa11.66□□□□□ -0.54
NUP50-203ENST00000407019 CITED1Q99966 193 aa11.66□□□□□ -0.54
NUP50-203ENST00000407019 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
NUP50-203ENST00000407019 TRACP01848 142 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 DAD1P61803 113 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 C6orf226Q5I0X4 101 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 PFN2P35080 140 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 CCL18P55774 89 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 LINC00337Q8N6G1 96 aa11.64□□□□□ -0.55
NUP50-203ENST00000407019 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
NUP50-203ENST00000407019 LINC01561Q8N1V8 128 aa11.63□□□□□ -0.55
NUP50-203ENST00000407019 C11orf68Q9H3H3 251 aaKnown RBP11.63□□□□□ -0.55
NUP50-203ENST00000407019 DEFB121Q5J5C9 76 aa11.63□□□□□ -0.55
NUP50-203ENST00000407019 Q8IZM0 81 aa11.63□□□□□ -0.55
NUP50-203ENST00000407019 MIFP14174 115 aa11.62□□□□□ -0.55
NUP50-203ENST00000407019 Q8NAQ8 132 aa11.62□□□□□ -0.55
NUP50-203ENST00000407019 ATP5G1P05496 136 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms