RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CPAMD8Q8IZJ3 1885 aa6.48□□□□□ -1.37
CACNA1C-220ENST00000399655 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
CACNA1C-220ENST00000399655 F8WDY8 70 aa6.48□□□□□ -1.37
CACNA1C-220ENST00000399655 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
CACNA1C-220ENST00000399655 MLANAQ16655 118 aa6.47□□□□□ -1.37
CACNA1C-220ENST00000399655 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
CACNA1C-220ENST00000399655 POM121L12Q8N7R1 296 aa6.47□□□□□ -1.37
CACNA1C-220ENST00000399655 REG3GQ6UW15 175 aa6.47□□□□□ -1.37
CACNA1C-220ENST00000399655 LYPD2Q6UXB3 125 aa6.47□□□□□ -1.37
CACNA1C-220ENST00000399655 A0A1B0GW54 56 aa6.46□□□□□ -1.37
CACNA1C-220ENST00000399655 SLURP1P55000 103 aa6.46□□□□□ -1.37
CACNA1C-220ENST00000399655 E7EQL1 145 aa6.46□□□□□ -1.38
CACNA1C-220ENST00000399655 CYSRT1A8MQ03 144 aa6.46□□□□□ -1.38
CACNA1C-220ENST00000399655 MSMPQ1L6U9 139 aa6.46□□□□□ -1.38
CACNA1C-220ENST00000399655 C15orf65H3BRN8 121 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 NUPR2A6NF83 97 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 LY6DQ14210 128 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 EPOPA6NHQ4 379 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 UQCR11O14957 56 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 Q8N814 137 aa6.45□□□□□ -1.38
CACNA1C-220ENST00000399655 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 Q6ZSR3 168 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 FHL2Q14192 279 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 A0A087WVE0 104 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 C17orf58Q2M2W7 97 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 DEFB136Q30KP8 78 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 TGFBR3LH3BV60 316 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 C17orf82Q86X59 251 aaPredicted RBP6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 XGP55808 180 aa6.44□□□□□ -1.38
CACNA1C-220ENST00000399655 BCE1O60756 84 aa6.43□□□□□ -1.38
CACNA1C-220ENST00000399655 TRBV6-8A0A0A6YYG3 113 aa6.43□□□□□ -1.38
CACNA1C-220ENST00000399655 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
CACNA1C-220ENST00000399655 A0A0J9YX75 114 aa6.43□□□□□ -1.38
CACNA1C-220ENST00000399655 LY6G6EA0A0G2JKS1 128 aa6.43□□□□□ -1.38
CACNA1C-220ENST00000399655 Q8IZM0 81 aa6.43□□□□□ -1.38
CACNA1C-220ENST00000399655 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
CACNA1C-220ENST00000399655 CDKN2A-AS1Q9UH64 79 aa6.42□□□□□ -1.38
CACNA1C-220ENST00000399655 IGLV11-55A0A075B6I3 123 aa6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 TRBV6-4A0A1B0GX49 114 aa6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 IGFBP6P24592 240 aaPredicted RBP6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 NHLRC4P0CG21 123 aaPredicted RBP6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 TNS1Q9HBL0 1735 aaKnown RBP6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 C6orf223Q8N319 242 aa6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 C2orf48Q96LS8 159 aa6.41□□□□□ -1.38
CACNA1C-220ENST00000399655 PRSS33Q8NF86 280 aa6.4□□□□□ -1.38
CACNA1C-220ENST00000399655 ZNF22P17026 224 aaPredicted RBP6.4□□□□□ -1.38
CACNA1C-220ENST00000399655 SIP14410 1827 aa6.4□□□□□ -1.39
CACNA1C-220ENST00000399655 E7EUB6 86 aa6.39□□□□□ -1.39
CACNA1C-220ENST00000399655 TNFRSF13BO14836 293 aaPredicted RBP6.39□□□□□ -1.39
CACNA1C-220ENST00000399655 C19orf84I3L1E1 186 aa6.39□□□□□ -1.39
CACNA1C-220ENST00000399655 LELP1Q5T871 98 aa6.39□□□□□ -1.39
CACNA1C-220ENST00000399655 IGLV4-3A0A075B6K6 122 aa6.39□□□□□ -1.39
CACNA1C-220ENST00000399655 TPSG1Q9NRR2 321 aa6.39□□□□□ -1.39
CACNA1C-220ENST00000399655 PIEZO2Q9H5I5 2752 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 CHD8Q9HCK8 2581 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 K7EIM0 57 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 I3L2K1 104 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 RPL37AP8A6NKH3 93 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 LCA10Q71F78 164 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 J3QKU1 62 aa6.38□□□□□ -1.39
CACNA1C-220ENST00000399655 PCSK5Q92824 1860 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 Q0VFX4 171 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 Q8N2B8 174 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 LINC01600Q96MT4 127 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 LINC00205P59089 165 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 MRGPRG-AS1Q2M3A8 158 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 TTTY13Q9BZ97 58 aa6.37□□□□□ -1.39
CACNA1C-220ENST00000399655 LY6HO94772 140 aa6.36□□□□□ -1.39
CACNA1C-220ENST00000399655 EIF4EBP3O60516 100 aaPredicted RBP6.36□□□□□ -1.39
CACNA1C-220ENST00000399655 EGFEM1PQ0D2K5 195 aa6.36□□□□□ -1.39
CACNA1C-220ENST00000399655 IGF2-ASQ6U949 168 aa6.36□□□□□ -1.39
CACNA1C-220ENST00000399655 MAP6D1Q9H9H5 199 aa6.36□□□□□ -1.39
CACNA1C-220ENST00000399655 CHCHD7Q9BUK0 85 aa6.36□□□□□ -1.39
CACNA1C-220ENST00000399655 DEFB4AO15263 64 aa6.35□□□□□ -1.39
CACNA1C-220ENST00000399655 EPM2AB3EWF7 344 aa6.35□□□□□ -1.39
CACNA1C-220ENST00000399655 VWCEQ96DN2 955 aa6.35□□□□□ -1.39
CACNA1C-220ENST00000399655 MBD6Q96DN6 1003 aa6.35□□□□□ -1.39
CACNA1C-220ENST00000399655 ZNF80P51504 273 aaPredicted RBP6.34□□□□□ -1.39
CACNA1C-220ENST00000399655 IGLV5-52A0A0A0MRZ9 124 aa6.34□□□□□ -1.39
CACNA1C-220ENST00000399655 PRR15Q8IV56 129 aa6.34□□□□□ -1.39
CACNA1C-220ENST00000399655 DAZAP2Q15038 168 aaPredicted RBP6.34□□□□□ -1.39
CACNA1C-220ENST00000399655 DEFB113Q30KQ7 82 aa6.34□□□□□ -1.4
CACNA1C-220ENST00000399655 SIGLEC1Q9BZZ2 1709 aa6.34□□□□□ -1.4
CACNA1C-220ENST00000399655 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
CACNA1C-220ENST00000399655 ZNRD1Q9P1U0 126 aa6.33□□□□□ -1.4
CACNA1C-220ENST00000399655 MAPK1IP1LQ8NDC0 245 aa6.33□□□□□ -1.4
CACNA1C-220ENST00000399655 FAM167A-AS1Q96KT0 104 aa6.33□□□□□ -1.4
CACNA1C-220ENST00000399655 U3KQK5 164 aa6.33□□□□□ -1.4
CACNA1C-220ENST00000399655 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms