RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ARHGAP21Q5T5U3 1957 aa5.95□□□□□ -1.46
SPTLC3-201ENST00000399002 A0A096LNJ9 63 aa5.95□□□□□ -1.46
SPTLC3-201ENST00000399002 HRCT1Q6UXD1 115 aa5.95□□□□□ -1.46
SPTLC3-201ENST00000399002 ADAMTSL4-AS1Q5T5F5 129 aa5.95□□□□□ -1.46
SPTLC3-201ENST00000399002 FAM19A4Q96LR4 140 aa5.95□□□□□ -1.46
SPTLC3-201ENST00000399002 Q9BRP9 147 aa5.95□□□□□ -1.46
SPTLC3-201ENST00000399002 IGLV4-60A0A075B6I1 120 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 Q6ZVQ6 151 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 AHCTF1Q8WYP5 2266 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 IGLV5-39A0A0G2JS06 123 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 IGLV5-52A0A0A0MRZ9 124 aa5.94□□□□□ -1.46
SPTLC3-201ENST00000399002 LYPD5Q6UWN5 251 aa5.93□□□□□ -1.46
SPTLC3-201ENST00000399002 AVPP01185 164 aa5.93□□□□□ -1.46
SPTLC3-201ENST00000399002 NHLRC4P0CG21 123 aaPredicted RBP5.93□□□□□ -1.46
SPTLC3-201ENST00000399002 C6orf223Q8N319 242 aa5.93□□□□□ -1.46
SPTLC3-201ENST00000399002 PTPRZ1P23471 2315 aaPredicted RBP5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 H0Y9P7 68 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 H3BNG1 76 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 CELA1Q9UNI1 258 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 PCDH15Q96QU1 1955 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 LY6G6CO95867 125 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 LINC00208Q96KT6 92 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 KIF25-AS1Q9Y6Z4 181 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 EDN2P20800 178 aa5.92□□□□□ -1.46
SPTLC3-201ENST00000399002 Q8N3U1 123 aa5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 TP53AIP1Q9HCN2 124 aa5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 BRWD1Q9NSI6 2320 aa5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 H3BPC8 53 aa5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 DOCK7Q96N67 2140 aa5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
SPTLC3-201ENST00000399002 Q6ZSN1 163 aa5.9□□□□□ -1.47
SPTLC3-201ENST00000399002 MALRD1Q5VYJ5 2156 aa5.9□□□□□ -1.47
SPTLC3-201ENST00000399002 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.47
SPTLC3-201ENST00000399002 M0R2N4 97 aa5.9□□□□□ -1.47
SPTLC3-201ENST00000399002 PRM2P04554 102 aa5.9□□□□□ -1.47
SPTLC3-201ENST00000399002 KIAA1549Q9HCM3 1950 aa5.9□□□□□ -1.47
SPTLC3-201ENST00000399002 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 C11orf72Q8NBR9 251 aa5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 RAI1Q7Z5J4 1906 aaPredicted RBP5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 TMEM254Q8TBM7 123 aa5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 NACAE9PAV3 2078 aa5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 CDSNQ15517 529 aa5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 PCNX3Q9H6A9 2034 aa5.89□□□□□ -1.47
SPTLC3-201ENST00000399002 CIRBP-AS1Q8TBR5 109 aa5.88□□□□□ -1.47
SPTLC3-201ENST00000399002 FHL3Q13643 280 aa5.88□□□□□ -1.47
SPTLC3-201ENST00000399002 LOC110117498A0A087WWA1 95 aa5.88□□□□□ -1.47
SPTLC3-201ENST00000399002 Q6ZTC4 211 aa5.88□□□□□ -1.47
SPTLC3-201ENST00000399002 LINC01556Q5JQF7 62 aa5.88□□□□□ -1.47
SPTLC3-201ENST00000399002 C1orf134Q5TEV5 83 aa5.87□□□□□ -1.47
SPTLC3-201ENST00000399002 A0A087WVE0 104 aa5.87□□□□□ -1.47
SPTLC3-201ENST00000399002 KLK9Q2XQG4 91 aa5.87□□□□□ -1.47
SPTLC3-201ENST00000399002 EXPH5Q8NEV8 1989 aa5.87□□□□□ -1.47
SPTLC3-201ENST00000399002 CACNA1EQ15878 2313 aa5.87□□□□□ -1.47
SPTLC3-201ENST00000399002 CRYGAP11844 174 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 COL4A2P08572 1712 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 MED13Q9UHV7 2174 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 PRR4Q16378 134 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 TRIOBPQ9H2D6 2365 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 Q6ZRU5 148 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 LINC00846Q9NV44 126 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
SPTLC3-201ENST00000399002 GTF3C1Q12789 2109 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 INTS1Q8N201 2190 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 LINC00337Q8N6G1 96 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 RETNQ9HD89 108 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 ELOF1P60002 83 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 A0A087WSZ3 146 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 SBSPONQ8IVN8 264 aa5.85□□□□□ -1.47
SPTLC3-201ENST00000399002 LINC00315P59091 139 aa5.84□□□□□ -1.48
SPTLC3-201ENST00000399002 TANC2Q9HCD6 1990 aa5.84□□□□□ -1.48
SPTLC3-201ENST00000399002 SMCR5Q8TEV8 140 aa5.84□□□□□ -1.48
SPTLC3-201ENST00000399002 MED12LQ86YW9 2145 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 SHANK1Q9Y566 2161 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 RTTNQ86VV8 2226 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 EML5Q05BV3 1969 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 C1orf64Q8NEQ6 169 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 FSHBP01225 129 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 SPATA3Q8NHX4 192 aa5.83□□□□□ -1.48
SPTLC3-201ENST00000399002 IGHV3OR16-9A0A0B4J2B5 98 aa5.82□□□□□ -1.48
SPTLC3-201ENST00000399002 ARFGEF3Q5TH69 2177 aa5.82□□□□□ -1.48
SPTLC3-201ENST00000399002 NCOA6Q14686 2063 aaPredicted RBP5.81□□□□□ -1.48
SPTLC3-201ENST00000399002 ACYP2P14621 99 aa5.81□□□□□ -1.48
SPTLC3-201ENST00000399002 SOSTDC1Q6X4U4 206 aa5.81□□□□□ -1.48
SPTLC3-201ENST00000399002 GVQW2A0A096LPI5 108 aaPredicted RBP5.81□□□□□ -1.48
SPTLC3-201ENST00000399002 ZDBF2Q9HCK1 2354 aa5.81□□□□□ -1.48
SPTLC3-201ENST00000399002 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
SPTLC3-201ENST00000399002 HCFC1P51610 2035 aa5.8□□□□□ -1.48
SPTLC3-201ENST00000399002 KRTAP10-9P60411 292 aa5.8□□□□□ -1.48
SPTLC3-201ENST00000399002 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
SPTLC3-201ENST00000399002 Q6ZQT0 140 aa5.8□□□□□ -1.48
SPTLC3-201ENST00000399002 SMIM29Q86T20 159 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms