RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 MUC7Q8TAX7 377 aa13.16□□□□□ -0.3
PDLIM2-205ENST00000397761 STARD9Q9P2P6 4700 aa13.16□□□□□ -0.3
PDLIM2-205ENST00000397761 H3BRM9 83 aa13.15□□□□□ -0.3
PDLIM2-205ENST00000397761 COX8AP10176 69 aa13.15□□□□□ -0.3
PDLIM2-205ENST00000397761 C14orf144Q96I85 54 aa13.14□□□□□ -0.31
PDLIM2-205ENST00000397761 TRAV8-4A0A0B4J246 113 aa13.13□□□□□ -0.31
PDLIM2-205ENST00000397761 IGLV5-39A0A0G2JS06 123 aa13.13□□□□□ -0.31
PDLIM2-205ENST00000397761 MIAQ16674 131 aa13.13□□□□□ -0.31
PDLIM2-205ENST00000397761 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
PDLIM2-205ENST00000397761 CHCHD10Q8WYQ3 142 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-205ENST00000397761 A0A087WZ39 114 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 IGHV1-58A0A0C4DH39 117 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 K7EP13 123 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 LEPROTO15243 131 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 DLEU1O43261 78 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 NMUP48645 174 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 BOD1L2Q8IYS8 172 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 Q9H8V8 135 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 UQCR10Q9UDW1 63 aa13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 KMT2CQ8NEZ4 4911 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-205ENST00000397761 PLECQ15149 4684 aaKnown RBP13.11□□□□□ -0.31
PDLIM2-205ENST00000397761 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
PDLIM2-205ENST00000397761 CRPP02741 224 aa13.11□□□□□ -0.31
PDLIM2-205ENST00000397761 XCL1P47992 114 aa13.11□□□□□ -0.31
PDLIM2-205ENST00000397761 ZFAND6Q6FIF0 208 aa13.11□□□□□ -0.31
PDLIM2-205ENST00000397761 PCP2Q8IVA1 136 aa13.11□□□□□ -0.31
PDLIM2-205ENST00000397761 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 SLC25A34Q6PIV7 304 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 UBE2WQ96B02 151 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 IBA57-AS1B1ANH7 110 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 TSPEAR-AS2P59090 65 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
PDLIM2-205ENST00000397761 IGLV10-54A0A075B6I4 117 aa13.09□□□□□ -0.31
PDLIM2-205ENST00000397761 J3QQQ9 107 aa13.09□□□□□ -0.31
PDLIM2-205ENST00000397761 FOXI1Q12951 378 aa13.09□□□□□ -0.31
PDLIM2-205ENST00000397761 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
PDLIM2-205ENST00000397761 UBE2DNLQ8IWF7 75 aa13.09□□□□□ -0.31
PDLIM2-205ENST00000397761 LYSTQ99698 3801 aa13.08□□□□□ -0.32
PDLIM2-205ENST00000397761 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
PDLIM2-205ENST00000397761 TP73-AS1Q9UF72 201 aa13.08□□□□□ -0.32
PDLIM2-205ENST00000397761 DDTP30046 118 aa13.07□□□□□ -0.32
PDLIM2-205ENST00000397761 MAPKAPK5-AS1Q8N8E1 139 aa13.07□□□□□ -0.32
PDLIM2-205ENST00000397761 IGHV3-64A0A075B6Q5 118 aa13.06□□□□□ -0.32
PDLIM2-205ENST00000397761 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
PDLIM2-205ENST00000397761 GAGE12HA6NDE8 117 aa13.04□□□□□ -0.32
PDLIM2-205ENST00000397761 COX7A2LO14548 114 aa13.04□□□□□ -0.32
PDLIM2-205ENST00000397761 MYMXA0A1B0GTQ4 84 aa13.04□□□□□ -0.32
PDLIM2-205ENST00000397761 LGALS3P17931 250 aaKnown RBP13.04□□□□□ -0.32
PDLIM2-205ENST00000397761 PCP4L1A6NKN8 68 aa13.03□□□□□ -0.32
PDLIM2-205ENST00000397761 C2orf91Q6ZV80 131 aa13.03□□□□□ -0.32
PDLIM2-205ENST00000397761 ZNF815PA8K554 130 aa13.02□□□□□ -0.33
PDLIM2-205ENST00000397761 C1orf43Q9BWL3 253 aa13.02□□□□□ -0.33
PDLIM2-205ENST00000397761 KRTAP1-5Q9BYS1 174 aa13.02□□□□□ -0.33
PDLIM2-205ENST00000397761 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
PDLIM2-205ENST00000397761 CASC10Q5T4H9 136 aa13.01□□□□□ -0.33
PDLIM2-205ENST00000397761 COX7B2Q8TF08 81 aa13□□□□□ -0.33
PDLIM2-205ENST00000397761 HIGD1BQ9P298 99 aa13□□□□□ -0.33
PDLIM2-205ENST00000397761 VPS13DQ5THJ4 4388 aa13□□□□□ -0.33
PDLIM2-205ENST00000397761 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
PDLIM2-205ENST00000397761 NDUFA1O15239 70 aa12.99□□□□□ -0.33
PDLIM2-205ENST00000397761 HNRNPA3P51991 378 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-205ENST00000397761 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
PDLIM2-205ENST00000397761 Q8IZM0 81 aa12.98□□□□□ -0.33
PDLIM2-205ENST00000397761 IGKV2D-24A0A075B6R9 120 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 RMI2Q96E14 147 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 Q9HAA7 133 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 RYR3Q15413 4870 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 MALP21145 153 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 KIAA0087Q14695 138 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
PDLIM2-205ENST00000397761 NBDYA0A0U1RRE5 68 aa12.96□□□□□ -0.34
PDLIM2-205ENST00000397761 APOMO95445 188 aa12.96□□□□□ -0.34
PDLIM2-205ENST00000397761 ORAOV1Q8WV07 137 aa12.95□□□□□ -0.34
PDLIM2-205ENST00000397761 LINC00587B1AMM8 73 aa12.94□□□□□ -0.34
PDLIM2-205ENST00000397761 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
PDLIM2-205ENST00000397761 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
PDLIM2-205ENST00000397761 A0A0J9YXY3 114 aa12.93□□□□□ -0.34
PDLIM2-205ENST00000397761 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
PDLIM2-205ENST00000397761 CTAG1AP78358 180 aa12.92□□□□□ -0.34
PDLIM2-205ENST00000397761 SCGB1D4Q6XE38 83 aa12.92□□□□□ -0.34
PDLIM2-205ENST00000397761 HERV-K104P63124 156 aa12.91□□□□□ -0.34
PDLIM2-205ENST00000397761 C15orf56Q8N910 161 aa12.91□□□□□ -0.34
PDLIM2-205ENST00000397761 PRSS2P07478 247 aa12.91□□□□□ -0.34
PDLIM2-205ENST00000397761 CXCL5P42830 114 aa12.91□□□□□ -0.34
PDLIM2-205ENST00000397761 C6orf226Q5I0X4 101 aa12.91□□□□□ -0.34
PDLIM2-205ENST00000397761 TIMM17BO60830 172 aa12.9□□□□□ -0.34
PDLIM2-205ENST00000397761 LITAFQ99732 161 aa12.9□□□□□ -0.34
PDLIM2-205ENST00000397761 TM2D2Q9BX73 214 aa12.9□□□□□ -0.34
PDLIM2-205ENST00000397761 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-205ENST00000397761 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
PDLIM2-205ENST00000397761 LINC00476Q8WZB0 136 aa12.89□□□□□ -0.35
PDLIM2-205ENST00000397761 GVQW2A0A096LPI5 108 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-205ENST00000397761 HSD52Q0P140 79 aa12.88□□□□□ -0.35
PDLIM2-205ENST00000397761 TAL2Q16559 108 aa12.88□□□□□ -0.35
PDLIM2-205ENST00000397761 CFAP161Q6P656 301 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms