RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PMCHL1Q16048 86 aa12.89□□□□□ -0.35
SNCA-203ENST00000394986 ERASQ7Z444 233 aa12.89□□□□□ -0.35
SNCA-203ENST00000394986 NPSP0C0P6 89 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 MALP21145 153 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 UBE2D1P51668 147 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 XGP55808 180 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 CNBPP62633 177 aaKnown RBP12.88□□□□□ -0.35
SNCA-203ENST00000394986 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 IGHV3OR16-9A0A0B4J2B5 98 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 COX6A2Q02221 97 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 KRTAP17-1Q9BYP8 105 aa12.88□□□□□ -0.35
SNCA-203ENST00000394986 C9orf163Q8N9P6 203 aa12.87□□□□□ -0.35
SNCA-203ENST00000394986 RAB5BP61020 215 aa12.85□□□□□ -0.35
SNCA-203ENST00000394986 PAPPA-AS1Q5QFB9 102 aa12.85□□□□□ -0.35
SNCA-203ENST00000394986 Q6ZSA8 131 aa12.85□□□□□ -0.35
SNCA-203ENST00000394986 HBDP02042 147 aa12.84□□□□□ -0.35
SNCA-203ENST00000394986 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
SNCA-203ENST00000394986 LINC01549A6NIU2 74 aa12.83□□□□□ -0.36
SNCA-203ENST00000394986 ZNF561-AS1K7EIQ3 104 aa12.83□□□□□ -0.36
SNCA-203ENST00000394986 IGLV4-69A0A075B6H9 119 aa12.82□□□□□ -0.36
SNCA-203ENST00000394986 BAGE3Q86Y29 109 aa12.81□□□□□ -0.36
SNCA-203ENST00000394986 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 A0A0J9YXV3 536 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
SNCA-203ENST00000394986 APOMO95445 188 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 SDIM1Q6ZPB5 146 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 ORAOV1Q8WV07 137 aa12.8□□□□□ -0.36
SNCA-203ENST00000394986 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
SNCA-203ENST00000394986 A0A087WZ39 114 aa12.79□□□□□ -0.36
SNCA-203ENST00000394986 PANO1I0J062 215 aa12.79□□□□□ -0.36
SNCA-203ENST00000394986 FAM19A3Q7Z5A8 133 aa12.79□□□□□ -0.36
SNCA-203ENST00000394986 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
SNCA-203ENST00000394986 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
SNCA-203ENST00000394986 ATP6V1G1O75348 118 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 SMR3BP02814 79 aaPredicted RBP12.78□□□□□ -0.36
SNCA-203ENST00000394986 LINC00310P59036 64 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 SYCNQ0VAF6 134 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 PMVKQ15126 192 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 SCXQ7RTU7 201 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 OR10D4PQ8NGN7 298 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 CARD19Q96LW7 228 aa12.78□□□□□ -0.36
SNCA-203ENST00000394986 Q6ZRU5 148 aa12.77□□□□□ -0.37
SNCA-203ENST00000394986 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.37
SNCA-203ENST00000394986 CAMK2N2Q96S95 79 aa12.77□□□□□ -0.37
SNCA-203ENST00000394986 GEMIN7Q9H840 131 aaKnown RBP12.77□□□□□ -0.37
SNCA-203ENST00000394986 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.37
SNCA-203ENST00000394986 SERF1AO75920 110 aa12.76□□□□□ -0.37
SNCA-203ENST00000394986 CHTF8P0CG12 524 aa12.76□□□□□ -0.37
SNCA-203ENST00000394986 NDUFA6P56556 154 aa12.76□□□□□ -0.37
SNCA-203ENST00000394986 HERVK_113P63121 156 aa12.76□□□□□ -0.37
SNCA-203ENST00000394986 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
SNCA-203ENST00000394986 HSBP1O75506 76 aa12.75□□□□□ -0.37
SNCA-203ENST00000394986 ATP5LO75964 103 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 SEC11AP67812 179 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 Q8N1X5 172 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 CIRBP-AS1Q8TBR5 109 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 C2orf48Q96LS8 159 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 KRTAP4-5Q9BYR2 181 aa12.74□□□□□ -0.37
SNCA-203ENST00000394986 FAT1Q14517 4588 aa12.73□□□□□ -0.37
SNCA-203ENST00000394986 TINCRA0A1B0GVN0 87 aa12.73□□□□□ -0.37
SNCA-203ENST00000394986 NUPR1O60356 82 aa12.73□□□□□ -0.37
SNCA-203ENST00000394986 KIAA0087Q14695 138 aa12.72□□□□□ -0.37
SNCA-203ENST00000394986 LINC01561Q8N1V8 128 aa12.72□□□□□ -0.37
SNCA-203ENST00000394986 S100A1P23297 94 aa12.71□□□□□ -0.37
SNCA-203ENST00000394986 IGKV2-24A0A0C4DH68 120 aa12.71□□□□□ -0.38
SNCA-203ENST00000394986 C10orf25Q5T742 122 aa12.71□□□□□ -0.38
SNCA-203ENST00000394986 IGLV5-45A0A087WSX0 123 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 A0A096LNI7 61 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
SNCA-203ENST00000394986 C2orf82Q6UX34 121 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 UNQ6190/PRO20217Q6UXQ8 127 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 IFI27L1Q96BM0 104 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 PACRGQ96M98 296 aaPredicted RBP12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
SNCA-203ENST00000394986 NDUFA1O15239 70 aa12.69□□□□□ -0.38
SNCA-203ENST00000394986 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
SNCA-203ENST00000394986 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
SNCA-203ENST00000394986 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
SNCA-203ENST00000394986 SPINK8P0C7L1 97 aa12.67□□□□□ -0.38
SNCA-203ENST00000394986 MRPL35Q9NZE8 188 aaKnown RBP12.67□□□□□ -0.38
SNCA-203ENST00000394986 PRSS2P07478 247 aa12.66□□□□□ -0.38
SNCA-203ENST00000394986 MAJINQ3KP22 176 aa12.66□□□□□ -0.38
SNCA-203ENST00000394986 Q5VSD8 79 aa12.66□□□□□ -0.38
SNCA-203ENST00000394986 DPH3Q96FX2 82 aa12.66□□□□□ -0.38
SNCA-203ENST00000394986 C6orf48Q9UBA6 75 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms