RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 Q6ZQY7 126 aa7.58□□□□□ -1.2
COL4A6-203ENST00000394872 UBE2D2P62837 147 aa7.57□□□□□ -1.2
COL4A6-203ENST00000394872 COX17Q14061 63 aa7.57□□□□□ -1.2
COL4A6-203ENST00000394872 MUC22E2RYF6 1773 aaPredicted RBP7.57□□□□□ -1.2
COL4A6-203ENST00000394872 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
COL4A6-203ENST00000394872 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
COL4A6-203ENST00000394872 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
COL4A6-203ENST00000394872 PRR15LQ9BU68 103 aa7.56□□□□□ -1.2
COL4A6-203ENST00000394872 BRI3O95415 125 aa7.55□□□□□ -1.2
COL4A6-203ENST00000394872 ANKHD1Q8IWZ3 2542 aaKnown RBP7.55□□□□□ -1.2
COL4A6-203ENST00000394872 CYSRT1A8MQ03 144 aa7.55□□□□□ -1.2
COL4A6-203ENST00000394872 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 Q8IZM0 81 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 CUL9Q8IWT3 2517 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 IGLV5-52A0A0A0MRZ9 124 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 ZNF73O43830 326 aaPredicted RBP7.54□□□□□ -1.2
COL4A6-203ENST00000394872 ODF3L2Q3SX64 289 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 M0QXV9 152 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 CCDC179H3BU77 68 aa7.54□□□□□ -1.2
COL4A6-203ENST00000394872 MRPS12O15235 138 aaKnown RBP7.54□□□□□ -1.2
COL4A6-203ENST00000394872 POLR2KP53803 58 aaKnown RBP7.54□□□□□ -1.2
COL4A6-203ENST00000394872 C10orf25Q5T742 122 aa7.53□□□□□ -1.2
COL4A6-203ENST00000394872 SPG11Q96JI7 2443 aa7.53□□□□□ -1.2
COL4A6-203ENST00000394872 PTPN13Q12923 2485 aa7.53□□□□□ -1.2
COL4A6-203ENST00000394872 IGLV1-51P01701 117 aa7.53□□□□□ -1.2
COL4A6-203ENST00000394872 RAI1Q7Z5J4 1906 aaPredicted RBP7.52□□□□□ -1.2
COL4A6-203ENST00000394872 LRP4O75096 1905 aa7.52□□□□□ -1.21
COL4A6-203ENST00000394872 HCFC1P51610 2035 aa7.52□□□□□ -1.21
COL4A6-203ENST00000394872 ACACBO00763 2458 aa7.52□□□□□ -1.21
COL4A6-203ENST00000394872 RPL28P46779 137 aaKnown RBP7.52□□□□□ -1.21
COL4A6-203ENST00000394872 C16orf95Q9H693 158 aa7.52□□□□□ -1.21
COL4A6-203ENST00000394872 CSPG4Q6UVK1 2322 aa7.52□□□□□ -1.21
COL4A6-203ENST00000394872 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
COL4A6-203ENST00000394872 Q6ZTC4 211 aa7.51□□□□□ -1.21
COL4A6-203ENST00000394872 TTC28Q96AY4 2481 aa7.51□□□□□ -1.21
COL4A6-203ENST00000394872 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.51□□□□□ -1.21
COL4A6-203ENST00000394872 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
COL4A6-203ENST00000394872 ATP5EP56381 51 aaPredicted RBP7.51□□□□□ -1.21
COL4A6-203ENST00000394872 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 LST1O00453 97 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 UNQ6190/PRO20217Q6UXQ8 127 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 C6orf223Q8N319 242 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 SNURFQ9Y675 71 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 FAM19A3Q7Z5A8 133 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 NOTCH2Q04721 2471 aa7.5□□□□□ -1.21
COL4A6-203ENST00000394872 REG3GQ6UW15 175 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 FAM30AQ9NZY2 134 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 Q8N9L7 120 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 SORL1Q92673 2214 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 LINC00694P0DN24 101 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 ATG2AQ2TAZ0 1938 aa7.49□□□□□ -1.21
COL4A6-203ENST00000394872 C9orf116Q5BN46 136 aaPredicted RBP7.48□□□□□ -1.21
COL4A6-203ENST00000394872 SERP2Q8N6R1 65 aa7.48□□□□□ -1.21
COL4A6-203ENST00000394872 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
COL4A6-203ENST00000394872 CRIP2P52943 208 aaPredicted RBP7.48□□□□□ -1.21
COL4A6-203ENST00000394872 EGFEM1PQ0D2K5 195 aa7.48□□□□□ -1.21
COL4A6-203ENST00000394872 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
COL4A6-203ENST00000394872 PRRC2AP48634 2157 aaKnown RBP7.48□□□□□ -1.21
COL4A6-203ENST00000394872 FHL2Q14192 279 aa7.47□□□□□ -1.21
COL4A6-203ENST00000394872 A6NED7 52 aa7.47□□□□□ -1.21
COL4A6-203ENST00000394872 NDUFC1O43677 76 aa7.47□□□□□ -1.21
COL4A6-203ENST00000394872 LINC00242Q5T6M2 205 aa7.47□□□□□ -1.21
COL4A6-203ENST00000394872 C2orf91Q6ZV80 131 aa7.47□□□□□ -1.21
COL4A6-203ENST00000394872 C1orf134Q5TEV5 83 aa7.47□□□□□ -1.21
COL4A6-203ENST00000394872 IGIPA6NJ69 53 aa7.46□□□□□ -1.21
COL4A6-203ENST00000394872 PRR4Q16378 134 aa7.46□□□□□ -1.21
COL4A6-203ENST00000394872 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 COX7CP15954 63 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 COX6A2Q02221 97 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 LINC01556Q5JQF7 62 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 SONP18583 2426 aaKnown RBP7.46□□□□□ -1.22
COL4A6-203ENST00000394872 ARHGAP32A7KAX9 2087 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 A0A1W2PPR1 153 aa7.46□□□□□ -1.22
COL4A6-203ENST00000394872 HIVEP3Q5T1R4 2406 aa7.45□□□□□ -1.22
COL4A6-203ENST00000394872 C1orf137Q5JT78 98 aa7.45□□□□□ -1.22
COL4A6-203ENST00000394872 Q6ZVQ6 151 aa7.45□□□□□ -1.22
COL4A6-203ENST00000394872 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
COL4A6-203ENST00000394872 FSHBP01225 129 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 XGP55808 180 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 ESRGQ1W209 222 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 PLXNB1O43157 2135 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 PTPRSQ13332 1948 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 EXPH5Q8NEV8 1989 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
COL4A6-203ENST00000394872 C10orf142B7Z368 130 aa7.43□□□□□ -1.22
COL4A6-203ENST00000394872 COL5A1P20908 1838 aaPredicted RBP7.43□□□□□ -1.22
COL4A6-203ENST00000394872 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
COL4A6-203ENST00000394872 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
COL4A6-203ENST00000394872 Q8N814 137 aa7.42□□□□□ -1.22
COL4A6-203ENST00000394872 CPAMD8Q8IZJ3 1885 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 LYPD5Q6UWN5 251 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 IGHV6-1A0A0B4J1U7 121 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 CELA1Q9UNI1 258 aa7.41□□□□□ -1.22
COL4A6-203ENST00000394872 SMIM26A0A096LP01 95 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms