RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PEMTQ9UBM1 199 aa11.77□□□□□ -0.53
PHTF1-205ENST00000393357 GNLYP22749 145 aa11.77□□□□□ -0.53
PHTF1-205ENST00000393357 RNF152Q8N8N0 203 aa11.77□□□□□ -0.53
PHTF1-205ENST00000393357 NOTCH2Q04721 2471 aa11.76□□□□□ -0.53
PHTF1-205ENST00000393357 ZNF415Q09FC8 603 aa11.76□□□□□ -0.53
PHTF1-205ENST00000393357 DYNLRB2Q8TF09 96 aa11.76□□□□□ -0.53
PHTF1-205ENST00000393357 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
PHTF1-205ENST00000393357 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
PHTF1-205ENST00000393357 UBE2L6O14933 153 aa11.76□□□□□ -0.53
PHTF1-205ENST00000393357 MALP21145 153 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 LINC00337Q8N6G1 96 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 AKAP9Q99996 3911 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
PHTF1-205ENST00000393357 UQCRQO14949 82 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 PSMB8P28062 276 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 Q6ZTI0 123 aa11.75□□□□□ -0.53
PHTF1-205ENST00000393357 FAM240AA0A1B0GVK7 77 aa11.74□□□□□ -0.53
PHTF1-205ENST00000393357 PRR3P79522 188 aaKnown RBP11.74□□□□□ -0.53
PHTF1-205ENST00000393357 RPL36AP83881 106 aaKnown RBP11.74□□□□□ -0.53
PHTF1-205ENST00000393357 RPL36ALQ969Q0 106 aaKnown RBP11.74□□□□□ -0.53
PHTF1-205ENST00000393357 Q96MF0 132 aa11.74□□□□□ -0.53
PHTF1-205ENST00000393357 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
PHTF1-205ENST00000393357 MSMBP08118 114 aa11.74□□□□□ -0.53
PHTF1-205ENST00000393357 HILS1P60008 231 aa11.74□□□□□ -0.53
PHTF1-205ENST00000393357 K7EMT4 169 aa11.73□□□□□ -0.53
PHTF1-205ENST00000393357 LINC00846Q9NV44 126 aa11.73□□□□□ -0.53
PHTF1-205ENST00000393357 A0A096LPF7 62 aa11.72□□□□□ -0.53
PHTF1-205ENST00000393357 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.53
PHTF1-205ENST00000393357 TRAV23DV6A0A075B6W5 121 aa11.71□□□□□ -0.53
PHTF1-205ENST00000393357 NOP10Q9NPE3 64 aaKnown RBP11.71□□□□□ -0.53
PHTF1-205ENST00000393357 KLK9Q2XQG4 91 aa11.71□□□□□ -0.54
PHTF1-205ENST00000393357 NBL1P41271 181 aa11.7□□□□□ -0.54
PHTF1-205ENST00000393357 TRGV2A0A075B6R0 118 aa11.7□□□□□ -0.54
PHTF1-205ENST00000393357 COX7CP15954 63 aa11.7□□□□□ -0.54
PHTF1-205ENST00000393357 NTM-AS1Q6ZSK4 140 aa11.7□□□□□ -0.54
PHTF1-205ENST00000393357 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
PHTF1-205ENST00000393357 HIST2H2BCQ6DN03 193 aa11.69□□□□□ -0.54
PHTF1-205ENST00000393357 C22orf24Q9Y442 160 aa11.69□□□□□ -0.54
PHTF1-205ENST00000393357 TRACP01848 142 aa11.69□□□□□ -0.54
PHTF1-205ENST00000393357 ACYP1P07311 99 aa11.69□□□□□ -0.54
PHTF1-205ENST00000393357 ZNF462Q96JM2 2506 aa11.69□□□□□ -0.54
PHTF1-205ENST00000393357 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
PHTF1-205ENST00000393357 WFDC10AQ9H1F0 79 aa11.68□□□□□ -0.54
PHTF1-205ENST00000393357 H3BUA1 57 aa11.68□□□□□ -0.54
PHTF1-205ENST00000393357 CXCL5P42830 114 aa11.68□□□□□ -0.54
PHTF1-205ENST00000393357 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
PHTF1-205ENST00000393357 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
PHTF1-205ENST00000393357 DEFB121Q5J5C9 76 aa11.67□□□□□ -0.54
PHTF1-205ENST00000393357 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
PHTF1-205ENST00000393357 C10orf105Q8TEF2 133 aa11.67□□□□□ -0.54
PHTF1-205ENST00000393357 J3KT08 172 aa11.66□□□□□ -0.54
PHTF1-205ENST00000393357 IGKV2-28A0A075B6P5 120 aa11.65□□□□□ -0.54
PHTF1-205ENST00000393357 IGKV2D-28P01615 120 aa11.65□□□□□ -0.54
PHTF1-205ENST00000393357 STHQ8IWL8 128 aa11.65□□□□□ -0.54
PHTF1-205ENST00000393357 MAP6D1Q9H9H5 199 aa11.65□□□□□ -0.54
PHTF1-205ENST00000393357 XCL1P47992 114 aa11.65□□□□□ -0.54
PHTF1-205ENST00000393357 INSP01308 110 aa11.64□□□□□ -0.55
PHTF1-205ENST00000393357 C4orf26Q17RF5 130 aa11.64□□□□□ -0.55
PHTF1-205ENST00000393357 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
PHTF1-205ENST00000393357 SMIM9A6NGZ8 99 aa11.64□□□□□ -0.55
PHTF1-205ENST00000393357 CCL18P55774 89 aa11.64□□□□□ -0.55
PHTF1-205ENST00000393357 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
PHTF1-205ENST00000393357 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
PHTF1-205ENST00000393357 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
PHTF1-205ENST00000393357 TIMM17BO60830 172 aa11.63□□□□□ -0.55
PHTF1-205ENST00000393357 FAM19A1Q7Z5A9 133 aa11.63□□□□□ -0.55
PHTF1-205ENST00000393357 COX7B2Q8TF08 81 aa11.63□□□□□ -0.55
PHTF1-205ENST00000393357 A8MTW9 85 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 C6orf226Q5I0X4 101 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 C11orf72Q8NBR9 251 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 IMUPQ9GZP8 106 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 ATOX1O00244 68 aa11.62□□□□□ -0.55
PHTF1-205ENST00000393357 DEFB130BP0DP73 79 aa11.61□□□□□ -0.55
PHTF1-205ENST00000393357 DEFB130AP0DP74 79 aa11.61□□□□□ -0.55
PHTF1-205ENST00000393357 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
PHTF1-205ENST00000393357 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
PHTF1-205ENST00000393357 IGLV10-54A0A075B6I4 117 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 C2orf48Q96LS8 159 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 ESM1Q9NQ30 184 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 NBPF19A0A087WUL8 3843 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 B4DSR2 109 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
PHTF1-205ENST00000393357 TMEM89A2RUT3 159 aa11.59□□□□□ -0.55
PHTF1-205ENST00000393357 K7EQD1 137 aa11.59□□□□□ -0.55
PHTF1-205ENST00000393357 LRRC75A-AS1Q8N1F1 130 aa11.59□□□□□ -0.55
PHTF1-205ENST00000393357 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
PHTF1-205ENST00000393357 F5H768 121 aa11.58□□□□□ -0.56
PHTF1-205ENST00000393357 COPS9Q8WXC6 57 aa11.58□□□□□ -0.56
PHTF1-205ENST00000393357 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.56
PHTF1-205ENST00000393357 IGSF10Q6WRI0 2623 aa11.58□□□□□ -0.56
PHTF1-205ENST00000393357 GHRHP01286 108 aa11.57□□□□□ -0.56
PHTF1-205ENST00000393357 FLNAP21333 2647 aaKnown RBP11.57□□□□□ -0.56
PHTF1-205ENST00000393357 UCNP55089 124 aa11.57□□□□□ -0.56
PHTF1-205ENST00000393357 C1orf158Q8N1D5 194 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms