RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 CELA1Q9UNI1 258 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 X6R8D5 127 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 QRFPP83859 136 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 C8orf49Q96NF6 230 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 K7EMI3 77 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 CCKP06307 115 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 PIK3CD-AS1Q5SR53 167 aa5.99□□□□□ -1.45
LIMS1-203ENST00000393310 TNCP24821 2201 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 IGHV3-66A0A0C4DH42 116 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 TP53TG3Q9ULZ0 132 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 SMIM27A0A1W2PRY6 76 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 C10orf113Q5VZT2 155 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 LINC00574Q9H8X3 128 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 LTAP01374 205 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 MIR17HGQ75NE6 70 aa5.98□□□□□ -1.45
LIMS1-203ENST00000393310 CRIP2P52943 208 aaPredicted RBP5.97□□□□□ -1.45
LIMS1-203ENST00000393310 PRR20EP86478 221 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 PRR20CP86479 221 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 PRR20DP86480 221 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 PRR20BP86481 221 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 PRR20AP86496 221 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 REG3AQ06141 175 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 MLANAQ16655 118 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 PRR26Q8N8Z3 221 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 A0A087WZ39 114 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 IGHV4-28A0A0C4DH34 117 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 IGKV1D-12P01611 117 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 ZNF492Q9P255 531 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 DSPP15924 2871 aaKnown RBP5.97□□□□□ -1.45
LIMS1-203ENST00000393310 Q6JHZ5 121 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 C1orf158Q8N1D5 194 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 DCANP1Q8TF63 244 aa5.97□□□□□ -1.45
LIMS1-203ENST00000393310 C8orf87E5RJ46 101 aa5.96□□□□□ -1.45
LIMS1-203ENST00000393310 F8VRH5 84 aa5.96□□□□□ -1.45
LIMS1-203ENST00000393310 FXYD7P58549 80 aa5.96□□□□□ -1.45
LIMS1-203ENST00000393310 LYSTQ99698 3801 aa5.96□□□□□ -1.45
LIMS1-203ENST00000393310 TENM4Q6N022 2769 aa5.96□□□□□ -1.45
LIMS1-203ENST00000393310 HIVEP1P15822 2718 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 NCKAP5O14513 1909 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 LY6LH3BQJ8 138 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 TMEM223A0PJW6 202 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 LST1O00453 97 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 ZNF503Q96F45 646 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 C17orf77Q96MU5 243 aa5.96□□□□□ -1.46
LIMS1-203ENST00000393310 MRPL35Q9NZE8 188 aaKnown RBP5.96□□□□□ -1.46
LIMS1-203ENST00000393310 ZNF524Q96C55 264 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 GFRA4Q9GZZ7 299 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 C19orf73Q9NVV2 129 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 RAI1Q7Z5J4 1906 aaPredicted RBP5.95□□□□□ -1.46
LIMS1-203ENST00000393310 Q9H8V8 135 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 C19orf54Q5BKX5 351 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 Q5XG85 94 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 Q6ZRU5 148 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 ODF3Q96PU9 254 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 EGR2P11161 476 aaPredicted RBP5.95□□□□□ -1.46
LIMS1-203ENST00000393310 RPL36AP83881 106 aaKnown RBP5.95□□□□□ -1.46
LIMS1-203ENST00000393310 RSPO1Q2MKA7 263 aaPredicted RBP5.95□□□□□ -1.46
LIMS1-203ENST00000393310 Q6ZSN1 163 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 COL27A1Q8IZC6 1860 aaPredicted RBP5.95□□□□□ -1.46
LIMS1-203ENST00000393310 Q8N6K4 173 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 RPL36ALQ969Q0 106 aaKnown RBP5.95□□□□□ -1.46
LIMS1-203ENST00000393310 TMEM141Q96I45 108 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 GFI1Q99684 422 aa5.95□□□□□ -1.46
LIMS1-203ENST00000393310 IGKV1-12A0A0C4DH73 117 aa5.94□□□□□ -1.46
LIMS1-203ENST00000393310 IGLV2-23P01705 113 aa5.94□□□□□ -1.46
LIMS1-203ENST00000393310 IGHV3OR16-8A0A075B7F1 116 aa5.94□□□□□ -1.46
LIMS1-203ENST00000393310 IGKV1-9A0A0C4DH69 117 aa5.94□□□□□ -1.46
LIMS1-203ENST00000393310 NEXN-AS1Q8NBZ9 246 aa5.94□□□□□ -1.46
LIMS1-203ENST00000393310 SH2D1AO60880 128 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 NDPQ00604 133 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 IGHV1OR15-1A0A075B7D0 117 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 SPINK9Q5DT21 86 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 C10orf99Q6UWK7 81 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 TTTY13Q9BZ97 58 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 DEFB4AO15263 64 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 CELSR2Q9HCU4 2923 aa5.93□□□□□ -1.46
LIMS1-203ENST00000393310 A8MUN3 132 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 Q9HAA7 133 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 NDUFA12Q9UI09 145 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 PRO0461Q9UI25 63 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 PRO0255Q9UI72 69 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 ATP11AUNQ6ZP68 121 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 IGKV1-27A0A075B6S5 117 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 PGLYRP1O75594 196 aaPredicted RBP5.92□□□□□ -1.46
LIMS1-203ENST00000393310 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 IGKV2D-24A0A075B6R9 120 aa5.92□□□□□ -1.46
LIMS1-203ENST00000393310 LINC00473A8K010 186 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 C10orf55Q5SWW7 151 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 Q6ZRM9 215 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 PRYO14603 147 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 C11orf52Q96A22 123 aa5.91□□□□□ -1.46
LIMS1-203ENST00000393310 CMYA5Q8N3K9 4069 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms