RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 RIGQ13278 110 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 CFAP161Q6P656 301 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 CD164L2Q6UWJ8 174 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 SMIM27A0A1W2PRY6 76 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 C1orf196B1AJZ1 125 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 COX7A2LO14548 114 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 TAGLN2P37802 199 aaKnown RBP2.89□□□□□ -1.95
C9orf72-203ENST00000380003 CT83Q5H943 113 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 FAM19A5Q7Z5A7 132 aaPredicted RBP2.89□□□□□ -1.95
C9orf72-203ENST00000380003 C7orf33Q8WU49 177 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 NAT8Q9UHE5 227 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 SPAG11BQ08648 103 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 LINC00469Q8N7U9 141 aa2.89□□□□□ -1.95
C9orf72-203ENST00000380003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.88□□□□□ -1.95
C9orf72-203ENST00000380003 PTTG1IPP53801 180 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 SERTAD4-AS1Q5TG53 156 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 Q6ZRP5 223 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 TMEM136Q6ZRR5 245 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 ORAOV1Q8WV07 137 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 TOMM7Q9P0U1 55 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 PSORS1C2Q9UIG4 136 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 IGHV1-58A0A0C4DH39 117 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 IFITM10A6NMD0 228 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 OXTP01178 125 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 ZNF25P17030 456 aaPredicted RBP2.88□□□□□ -1.95
C9orf72-203ENST00000380003 HBBP68871 147 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 FAM74A3Q4VXF1 159 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 C1orf137Q5JT78 98 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 IMMP2LQ96T52 175 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 SMIM2Q9BVW6 85 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 XAGE1AQ9HD64 81 aa2.88□□□□□ -1.95
C9orf72-203ENST00000380003 A0A087WZ39 114 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 PEA15Q15121 130 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 APOMO95445 188 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 RAB5AP20339 215 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 MRPL52Q86TS9 123 aaKnown RBP2.87□□□□□ -1.95
C9orf72-203ENST00000380003 PRELID3AQ96N28 172 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 IGHV3OR16-9A0A0B4J2B5 98 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 IFI27P40305 119 aaPredicted RBP2.87□□□□□ -1.95
C9orf72-203ENST00000380003 PRR26Q8N8Z3 221 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 C6orf48Q9UBA6 75 aa2.87□□□□□ -1.95
C9orf72-203ENST00000380003 TRBV24-1A0A075B6N3 115 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 A0A1B0GXF2 115 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 H7C423 109 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 ADCYAP1P18509 176 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 RAB5BP61020 215 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 LINC00242Q5T6M2 205 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 IGLV4-3A0A075B6K6 122 aa2.86□□□□□ -1.95
C9orf72-203ENST00000380003 MT-ND6P03923 174 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 LOC107984640A0A0U1RRK4 108 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 LINC00862A6NCI5 91 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 GAGE10A6NGK3 116 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 C2orf66Q6UXQ4 117 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 LINC01600Q96MT4 127 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 SCO1O75880 301 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 PMCHL1Q16048 86 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 C9orf129Q5T035 196 aaKnown RBP2.85□□□□□ -1.95
C9orf72-203ENST00000380003 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 C20orf78Q9BR46 151 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 CTDSP1Q9GZU7 261 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
C9orf72-203ENST00000380003 RPL37AP8A6NKH3 93 aa2.84□□□□□ -1.95
C9orf72-203ENST00000380003 F8W036 122 aa2.84□□□□□ -1.95
C9orf72-203ENST00000380003 UBE2BP63146 152 aa2.84□□□□□ -1.95
C9orf72-203ENST00000380003 SRSF9Q13242 221 aaKnown RBP eCLIP2.84□□□□□ -1.95
C9orf72-203ENST00000380003 KIAA0087Q14695 138 aa2.84□□□□□ -1.95
C9orf72-203ENST00000380003 LINC00173Q6ZV60 143 aa2.84□□□□□ -1.95
C9orf72-203ENST00000380003 CDKN2A-AS1Q9UH64 79 aa2.84□□□□□ -1.95
C9orf72-203ENST00000380003 CSDC2Q9Y534 153 aaKnown RBP2.84□□□□□ -1.95
C9orf72-203ENST00000380003 TMEM141Q96I45 108 aa2.84□□□□□ -1.96
C9orf72-203ENST00000380003 TGIF2-C20orf24A0A0A6YYL0 155 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 M0QXV9 152 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 NDUFA1O15239 70 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 TSPAN13O95857 204 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 IFITM2Q01629 132 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 TEX43Q6ZNM6 134 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 TMEM18Q96B42 140 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 PPP1R2P9O14990 202 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 PPP1R17O96001 155 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 C6orf226Q5I0X4 101 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 ZNF625Q96I27 306 aaPredicted RBP2.83□□□□□ -1.96
C9orf72-203ENST00000380003 VCX2Q9H322 139 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 MAP1LC3AQ9H492 121 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 UBE2D1P51668 147 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 KRTAP10-8P60410 259 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 RAB14P61106 215 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 SPINK6Q6UWN8 80 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 ALKBH7Q9BT30 221 aaPredicted RBP2.83□□□□□ -1.96
C9orf72-203ENST00000380003 KRTAP9-8Q9BYQ0 159 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 SPANXA1Q9NS26 97 aa2.83□□□□□ -1.96
C9orf72-203ENST00000380003 A0A0U1RRA0 63 aa2.82□□□□□ -1.96
C9orf72-203ENST00000380003 IGIPA6NJ69 53 aa2.82□□□□□ -1.96
C9orf72-203ENST00000380003 MT-ND4LP03901 98 aa2.82□□□□□ -1.96
C9orf72-203ENST00000380003 SPINK8P0C7L1 97 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms