RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PRR14LQ5THK1 2151 aa11.94□□□□□ -0.5
RGP1-201ENST00000378078 TRBV7-6A0A0J9YX20 115 aa11.94□□□□□ -0.5
RGP1-201ENST00000378078 TIMM17BO60830 172 aa11.94□□□□□ -0.5
RGP1-201ENST00000378078 SOSTDC1Q6X4U4 206 aa11.94□□□□□ -0.5
RGP1-201ENST00000378078 TSHBP01222 138 aa11.94□□□□□ -0.5
RGP1-201ENST00000378078 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
RGP1-201ENST00000378078 MUC4Q99102 2169 aa11.93□□□□□ -0.5
RGP1-201ENST00000378078 CDSNQ15517 529 aa11.93□□□□□ -0.5
RGP1-201ENST00000378078 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
RGP1-201ENST00000378078 EML5Q05BV3 1969 aa11.93□□□□□ -0.5
RGP1-201ENST00000378078 RPL28P46779 137 aaKnown RBP11.92□□□□□ -0.5
RGP1-201ENST00000378078 RNF185Q96GF1 192 aa11.92□□□□□ -0.5
RGP1-201ENST00000378078 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
RGP1-201ENST00000378078 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
RGP1-201ENST00000378078 Q6ZTC4 211 aa11.92□□□□□ -0.5
RGP1-201ENST00000378078 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
RGP1-201ENST00000378078 ZNF73O43830 326 aaPredicted RBP11.92□□□□□ -0.5
RGP1-201ENST00000378078 ODF3Q96PU9 254 aa11.92□□□□□ -0.5
RGP1-201ENST00000378078 SPRY4Q9C004 299 aa11.91□□□□□ -0.5
RGP1-201ENST00000378078 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 GAS8-AS1O95177 125 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.5
RGP1-201ENST00000378078 PRLHP81277 87 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 LINC00337Q8N6G1 96 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 LINC00208Q96KT6 92 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 U3KQK5 164 aa11.9□□□□□ -0.5
RGP1-201ENST00000378078 COX6A2Q02221 97 aa11.9□□□□□ -0.51
RGP1-201ENST00000378078 PSMG3-AS1Q96PY0 264 aa11.89□□□□□ -0.51
RGP1-201ENST00000378078 Q9UF83 564 aa11.89□□□□□ -0.51
RGP1-201ENST00000378078 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
RGP1-201ENST00000378078 UQCRQO14949 82 aa11.88□□□□□ -0.51
RGP1-201ENST00000378078 C11orf71Q6IPW1 123 aa11.88□□□□□ -0.51
RGP1-201ENST00000378078 LST1O00453 97 aa11.87□□□□□ -0.51
RGP1-201ENST00000378078 Q9BRP9 147 aa11.87□□□□□ -0.51
RGP1-201ENST00000378078 EBI3Q14213 229 aa11.87□□□□□ -0.51
RGP1-201ENST00000378078 RNASE3P12724 160 aaKnown RBP11.86□□□□□ -0.51
RGP1-201ENST00000378078 SERTAD4-AS1Q5TG53 156 aa11.86□□□□□ -0.51
RGP1-201ENST00000378078 PLXNB1O43157 2135 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 A0A1B0GXF2 115 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 PSPHP1O15172 72 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 SORL1Q92673 2214 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 IGKV2D-30A0A075B6S6 120 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 A8MTW9 85 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 IGKV2-30P06310 120 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 CRYGAP11844 174 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 V9GYY9 64 aa11.85□□□□□ -0.51
RGP1-201ENST00000378078 CCDC179H3BU77 68 aa11.84□□□□□ -0.51
RGP1-201ENST00000378078 AVPP01185 164 aa11.84□□□□□ -0.51
RGP1-201ENST00000378078 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
RGP1-201ENST00000378078 TRBV10-3A0A0K0K1G6 114 aa11.83□□□□□ -0.52
RGP1-201ENST00000378078 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
RGP1-201ENST00000378078 C7orf65Q6ZTY9 151 aa11.82□□□□□ -0.52
RGP1-201ENST00000378078 A0A087WYN8 130 aa11.82□□□□□ -0.52
RGP1-201ENST00000378078 SPACA4Q8TDM5 124 aa11.82□□□□□ -0.52
RGP1-201ENST00000378078 Q6ZPA2 131 aa11.81□□□□□ -0.52
RGP1-201ENST00000378078 C11orf21Q9P2W6 132 aa11.81□□□□□ -0.52
RGP1-201ENST00000378078 IGLV4-60A0A075B6I1 120 aa11.81□□□□□ -0.52
RGP1-201ENST00000378078 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
RGP1-201ENST00000378078 PRRC2AP48634 2157 aaKnown RBP11.8□□□□□ -0.52
RGP1-201ENST00000378078 AGRNO00468 2067 aa11.79□□□□□ -0.52
RGP1-201ENST00000378078 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
RGP1-201ENST00000378078 NRACQ8N912 160 aa11.78□□□□□ -0.52
RGP1-201ENST00000378078 OTOGLQ3ZCN5 2332 aa11.78□□□□□ -0.52
RGP1-201ENST00000378078 PTPRQQ9UMZ3 2332 aa11.77□□□□□ -0.52
RGP1-201ENST00000378078 CHTF8P0CG12 524 aa11.77□□□□□ -0.53
RGP1-201ENST00000378078 ATP5EP2Q5VTU8 51 aa11.77□□□□□ -0.53
RGP1-201ENST00000378078 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
RGP1-201ENST00000378078 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.53
RGP1-201ENST00000378078 A0A087WVE0 104 aa11.76□□□□□ -0.53
RGP1-201ENST00000378078 COX17Q14061 63 aa11.76□□□□□ -0.53
RGP1-201ENST00000378078 H0Y9P7 68 aa11.76□□□□□ -0.53
RGP1-201ENST00000378078 HCG22E2RYF7 251 aa11.75□□□□□ -0.53
RGP1-201ENST00000378078 GPR179Q6PRD1 2367 aa11.75□□□□□ -0.53
RGP1-201ENST00000378078 HIVEP2P31629 2446 aa11.75□□□□□ -0.53
RGP1-201ENST00000378078 ADAMTS20P59510 1910 aa11.75□□□□□ -0.53
RGP1-201ENST00000378078 CACNA1HO95180 2353 aa11.75□□□□□ -0.53
RGP1-201ENST00000378078 ZFHX2Q9C0A1 2572 aaPredicted RBP11.74□□□□□ -0.53
RGP1-201ENST00000378078 PMAIP1Q13794 54 aa11.74□□□□□ -0.53
RGP1-201ENST00000378078 A0A087WSZ3 146 aa11.74□□□□□ -0.53
RGP1-201ENST00000378078 LINC00575Q6W349 94 aa11.74□□□□□ -0.53
RGP1-201ENST00000378078 TECTAO75443 2155 aa11.74□□□□□ -0.53
RGP1-201ENST00000378078 IGLV8-61A0A075B6I0 122 aa11.73□□□□□ -0.53
RGP1-201ENST00000378078 C1orf195Q5TG92 126 aa11.73□□□□□ -0.53
RGP1-201ENST00000378078 Q8IZM0 81 aa11.72□□□□□ -0.53
RGP1-201ENST00000378078 Q8N814 137 aa11.72□□□□□ -0.53
RGP1-201ENST00000378078 C11orf1Q9H5F2 150 aa11.72□□□□□ -0.53
RGP1-201ENST00000378078 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.72□□□□□ -0.53
RGP1-201ENST00000378078 ZNF580Q9UK33 172 aa11.71□□□□□ -0.53
RGP1-201ENST00000378078 ZNF295-AS1Q8N0V1 137 aa11.7□□□□□ -0.54
RGP1-201ENST00000378078 PTPRSQ13332 1948 aa11.7□□□□□ -0.54
RGP1-201ENST00000378078 P0C879 139 aa11.69□□□□□ -0.54
RGP1-201ENST00000378078 Q6ZSN1 163 aa11.69□□□□□ -0.54
RGP1-201ENST00000378078 IGLV1-40P01703 118 aa11.68□□□□□ -0.54
RGP1-201ENST00000378078 NTM-AS1Q6ZSK4 140 aa11.68□□□□□ -0.54
RGP1-201ENST00000378078 LRP4O75096 1905 aa11.68□□□□□ -0.54
RGP1-201ENST00000378078 NDUFC1O43677 76 aa11.68□□□□□ -0.54
RGP1-201ENST00000378078 FHL2Q14192 279 aa11.68□□□□□ -0.54
RGP1-201ENST00000378078 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms