RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 DNAH3Q8TD57 4116 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 TRAV8-6A0A0B4J262 113 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 K7EMI3 77 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 S100A6P06703 90 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 LINC00614P0C842 121 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 IFI27P40305 119 aaPredicted RBP3.68□□□□□ -1.82
SSX3-203ENST00000376895 POLR2KP53803 58 aaKnown RBP3.68□□□□□ -1.82
SSX3-203ENST00000376895 CCL18P55774 89 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 SMAGPQ0VAQ4 97 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 Q0VG73 95 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 ORMDL2Q53FV1 153 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 NIT1Q86X76 327 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 TMEM70Q9BUB7 260 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 SMIM2Q9BVW6 85 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 GTSF1LQ9H1H1 148 aa3.68□□□□□ -1.82
SSX3-203ENST00000376895 TRBV25-1A0A075B6N4 114 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 A0A096LPF7 62 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 TRBV27A0A0K0K1C4 114 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 TMEM262E9PQX1 116 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 C3orf84H3BNL1 204 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 UBE2L6O14933 153 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BKO60814 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BJP06899 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 NDUFA6P56556 154 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 PKIAP61925 76 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 IQCJQ1A5X6 159 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
SSX3-203ENST00000376895 ZFAND6Q6FIF0 208 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 LYPD5Q6UWN5 251 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
SSX3-203ENST00000376895 TENM3Q9P273 2699 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 TRBV6-8A0A0A6YYG3 113 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 LINC01549A6NIU2 74 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 HSBP1O75506 76 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 REG3AQ06141 175 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 LELP1Q5T871 98 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 AMMECR1LQ6DCA0 310 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 UBE2DNLQ8IWF7 75 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
SSX3-203ENST00000376895 COL7A1Q02388 2944 aa3.65□□□□□ -1.82
SSX3-203ENST00000376895 IGLV2-18A0A075B6J9 118 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 LINC01546A6NGU7 62 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 LINC00694P0DN24 101 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 ESRGQ1W209 222 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 DEFB104AQ8WTQ1 72 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 APLNQ9ULZ1 77 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 CYSLTR1Q9Y271 337 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 NACAE9PAV3 2078 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 STAB2Q8WWQ8 2551 aa3.65□□□□□ -1.83
SSX3-203ENST00000376895 A0A087WX48 190 aa3.64□□□□□ -1.83
SSX3-203ENST00000376895 HBDP02042 147 aa3.64□□□□□ -1.83
SSX3-203ENST00000376895 ESDP10768 282 aa3.64□□□□□ -1.83
SSX3-203ENST00000376895 S100A2P29034 98 aa3.64□□□□□ -1.83
SSX3-203ENST00000376895 SCGB3A1Q96QR1 104 aa3.64□□□□□ -1.83
SSX3-203ENST00000376895 MRPS16Q9Y3D3 137 aaKnown RBP3.64□□□□□ -1.83
SSX3-203ENST00000376895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
SSX3-203ENST00000376895 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
SSX3-203ENST00000376895 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.63□□□□□ -1.83
SSX3-203ENST00000376895 SIVA1O15304 175 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 LEPROTL1O95214 131 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 FGF6P10767 208 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 ZNF25P17030 456 aaPredicted RBP3.63□□□□□ -1.83
SSX3-203ENST00000376895 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 LINC00173Q6ZV60 143 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 FAM19A2Q8N3H0 131 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 TOMM6Q96B49 74 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 TMEM141Q96I45 108 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 CHCHD7Q9BUK0 85 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 TIMM21Q9BVV7 248 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 SPANXA1Q9NS26 97 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 HSPB8Q9UJY1 196 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 LINC00588Q9Y4M8 146 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 DNAH9Q9NYC9 4486 aa3.63□□□□□ -1.83
SSX3-203ENST00000376895 NUPR1O60356 82 aa3.62□□□□□ -1.83
SSX3-203ENST00000376895 FABP4P15090 132 aa3.62□□□□□ -1.83
SSX3-203ENST00000376895 PMCHL1Q16048 86 aa3.62□□□□□ -1.83
SSX3-203ENST00000376895 MRPL52Q86TS9 123 aaKnown RBP3.62□□□□□ -1.83
SSX3-203ENST00000376895 ZNF664Q8N3J9 261 aa3.62□□□□□ -1.83
SSX3-203ENST00000376895 PACRGQ96M98 296 aaPredicted RBP3.62□□□□□ -1.83
SSX3-203ENST00000376895 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
SSX3-203ENST00000376895 K7EP13 123 aa3.61□□□□□ -1.83
SSX3-203ENST00000376895 IGHV3-30P01768 117 aa3.61□□□□□ -1.83
SSX3-203ENST00000376895 IGHV3-33P01772 117 aa3.61□□□□□ -1.83
SSX3-203ENST00000376895 ANGP03950 147 aaKnown RBP3.61□□□□□ -1.83
SSX3-203ENST00000376895 IGHV3-30-3P0DP02 117 aa3.61□□□□□ -1.83
SSX3-203ENST00000376895 IGHV3-30-5P0DP03 117 aa3.61□□□□□ -1.83
SSX3-203ENST00000376895 RBX1P62877 108 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms