RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 BAALC-AS2P0C853 105 aa9.32□□□□□ -0.92
MSH5-204ENST00000375755 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
MSH5-204ENST00000375755 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
MSH5-204ENST00000375755 A0A1W2PRX2 142 aa9.31□□□□□ -0.92
MSH5-204ENST00000375755 COX7CP15954 63 aa9.31□□□□□ -0.92
MSH5-204ENST00000375755 PEMTQ9UBM1 199 aa9.31□□□□□ -0.92
MSH5-204ENST00000375755 ATP5G1P05496 136 aa9.31□□□□□ -0.92
MSH5-204ENST00000375755 TIRAPP58753 221 aa9.31□□□□□ -0.92
MSH5-204ENST00000375755 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
MSH5-204ENST00000375755 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 KNCNA6PVL3 124 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 CXCL5P42830 114 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 LINC00467Q9BRT7 94 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 J3KT08 172 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 GAGE2AQ6NT46 116 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 Q6ZSN1 163 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 RNF152Q8N8N0 203 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 Q9H8V8 135 aa9.3□□□□□ -0.92
MSH5-204ENST00000375755 CIRBPQ14011 172 aaKnown RBP9.29□□□□□ -0.92
MSH5-204ENST00000375755 TRACP01848 142 aa9.29□□□□□ -0.92
MSH5-204ENST00000375755 HTN1P15515 57 aa9.29□□□□□ -0.92
MSH5-204ENST00000375755 COX6A2Q02221 97 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 A0A1B0GX51 115 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 RBMY1A1P0DJD3 496 aaKnown RBP9.28□□□□□ -0.92
MSH5-204ENST00000375755 RBMY1CP0DJD4 496 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 RBMY1FQ15415 496 aaKnown RBP9.28□□□□□ -0.92
MSH5-204ENST00000375755 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 HIVEP2P31629 2446 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 IGHV3-38A0A0C4DH36 116 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 PRM2P04554 102 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
MSH5-204ENST00000375755 CRYGAP11844 174 aa9.27□□□□□ -0.93
MSH5-204ENST00000375755 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.93
MSH5-204ENST00000375755 HRCT1Q6UXD1 115 aa9.27□□□□□ -0.93
MSH5-204ENST00000375755 HIVEP1P15822 2718 aa9.27□□□□□ -0.93
MSH5-204ENST00000375755 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
MSH5-204ENST00000375755 VWFP04275 2813 aa9.27□□□□□ -0.93
MSH5-204ENST00000375755 TRAV25A0A0B4J276 109 aa9.26□□□□□ -0.93
MSH5-204ENST00000375755 DSCR8Q96T75 97 aa9.26□□□□□ -0.93
MSH5-204ENST00000375755 NACAE9PAV3 2078 aa9.26□□□□□ -0.93
MSH5-204ENST00000375755 K7EQG2 157 aa9.26□□□□□ -0.93
MSH5-204ENST00000375755 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
MSH5-204ENST00000375755 Q9HAA7 133 aa9.26□□□□□ -0.93
MSH5-204ENST00000375755 JMJD1CQ15652 2540 aa9.26□□□□□ -0.93
MSH5-204ENST00000375755 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
MSH5-204ENST00000375755 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
MSH5-204ENST00000375755 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
MSH5-204ENST00000375755 FAM222AQ5U5X8 452 aa9.25□□□□□ -0.93
MSH5-204ENST00000375755 OR13C6PQ8NH95 151 aa9.25□□□□□ -0.93
MSH5-204ENST00000375755 TENM1Q9UKZ4 2725 aa9.24□□□□□ -0.93
MSH5-204ENST00000375755 C4orf3Q8WVX3 66 aa9.24□□□□□ -0.93
MSH5-204ENST00000375755 IGHV3OR16-12A0A075B7B8 117 aa9.24□□□□□ -0.93
MSH5-204ENST00000375755 ATOX1O00244 68 aa9.24□□□□□ -0.93
MSH5-204ENST00000375755 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
MSH5-204ENST00000375755 FN1P02751 2386 aaKnown RBP9.24□□□□□ -0.93
MSH5-204ENST00000375755 NSD1Q96L73 2696 aaPredicted RBP9.24□□□□□ -0.93
MSH5-204ENST00000375755 TMEM86BQ8N661 226 aa9.23□□□□□ -0.93
MSH5-204ENST00000375755 LINC01006Q8NI28 216 aa9.23□□□□□ -0.93
MSH5-204ENST00000375755 F5H768 121 aa9.23□□□□□ -0.93
MSH5-204ENST00000375755 MALP21145 153 aa9.23□□□□□ -0.93
MSH5-204ENST00000375755 LINC00242Q5T6M2 205 aa9.23□□□□□ -0.93
MSH5-204ENST00000375755 PIK3CD-AS1Q5SR53 167 aa9.22□□□□□ -0.93
MSH5-204ENST00000375755 C9orf129Q5T035 196 aaKnown RBP9.22□□□□□ -0.93
MSH5-204ENST00000375755 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
MSH5-204ENST00000375755 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.93
MSH5-204ENST00000375755 LY6G6DO95868 133 aa9.21□□□□□ -0.93
MSH5-204ENST00000375755 DEFB131AP59861 70 aa9.21□□□□□ -0.93
MSH5-204ENST00000375755 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.93
MSH5-204ENST00000375755 PRIMA1Q86XR5 153 aa9.21□□□□□ -0.93
MSH5-204ENST00000375755 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.94
MSH5-204ENST00000375755 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.94
MSH5-204ENST00000375755 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
MSH5-204ENST00000375755 COPS9Q8WXC6 57 aa9.2□□□□□ -0.94
MSH5-204ENST00000375755 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
MSH5-204ENST00000375755 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
MSH5-204ENST00000375755 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
MSH5-204ENST00000375755 FLNBO75369 2602 aaKnown RBP9.19□□□□□ -0.94
MSH5-204ENST00000375755 C14orf132Q9NPU4 83 aa9.19□□□□□ -0.94
MSH5-204ENST00000375755 A0A087WVE0 104 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 RNASE1P07998 156 aaKnown RBP9.18□□□□□ -0.94
MSH5-204ENST00000375755 DNAL4O96015 105 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 DEFB114Q30KQ6 69 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 CCL24O00175 119 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 RPL28P46779 137 aaKnown RBP9.18□□□□□ -0.94
MSH5-204ENST00000375755 UPK3BQ9BT76 320 aa9.18□□□□□ -0.94
MSH5-204ENST00000375755 A0A087WYN8 130 aa9.17□□□□□ -0.94
MSH5-204ENST00000375755 OXTP01178 125 aa9.17□□□□□ -0.94
MSH5-204ENST00000375755 DYNLRB2Q8TF09 96 aa9.17□□□□□ -0.94
MSH5-204ENST00000375755 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
MSH5-204ENST00000375755 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
MSH5-204ENST00000375755 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
MSH5-204ENST00000375755 KRTAP10-3P60369 221 aa9.16□□□□□ -0.94
MSH5-204ENST00000375755 SERP2Q8N6R1 65 aa9.16□□□□□ -0.94
MSH5-204ENST00000375755 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms