RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FNDC1Q4ZHG4 1894 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-202ENST00000375427 COX8CQ7Z4L0 72 aa4.46□□□□□ -1.7
SCN2A-202ENST00000375427 ZFHX2Q9C0A1 2572 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-202ENST00000375427 PRO0255Q9UI72 69 aa4.46□□□□□ -1.7
SCN2A-202ENST00000375427 SHISA3A0PJX4 238 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 LY6HO94772 140 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 C20orf203Q8NBC4 194 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 IGLV11-55A0A075B6I3 123 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 EPM2AB3EWF7 344 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 C19orf48Q6RUI8 117 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
SCN2A-202ENST00000375427 CPAMD8Q8IZJ3 1885 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 A0A087WYN8 130 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
SCN2A-202ENST00000375427 PIP4P1Q86T03 277 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 CAMTA1Q9Y6Y1 1673 aa4.45□□□□□ -1.7
SCN2A-202ENST00000375427 A0A0J9YX75 114 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 LINC00337Q8N6G1 96 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 C19orf71A6NCJ1 209 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 P0C879 139 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 Q96MF0 132 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 TSHBP01222 138 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 REG3GQ6UW15 175 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 COL16A1Q07092 1604 aaPredicted RBP4.44□□□□□ -1.7
SCN2A-202ENST00000375427 C2orf48Q96LS8 159 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 C15orf65H3BRN8 121 aa4.44□□□□□ -1.7
SCN2A-202ENST00000375427 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 USP9YO00507 2555 aaPredicted RBP4.43□□□□□ -1.7
SCN2A-202ENST00000375427 SETD2Q9BYW2 2564 aaPredicted RBP4.43□□□□□ -1.7
SCN2A-202ENST00000375427 IGKV1D-43A0A0B4J1Z2 117 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
SCN2A-202ENST00000375427 C6orf223Q8N319 242 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 DEFB123Q8N688 67 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 C11orf45Q8TAV5 145 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 BRWD3Q6RI45 1802 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 LINC00482Q8N8I6 264 aa4.43□□□□□ -1.7
SCN2A-202ENST00000375427 RAI1Q7Z5J4 1906 aaPredicted RBP4.43□□□□□ -1.7
SCN2A-202ENST00000375427 Q1T7F1 81 aa4.42□□□□□ -1.7
SCN2A-202ENST00000375427 LINC01548A6NM66 108 aa4.42□□□□□ -1.7
SCN2A-202ENST00000375427 FASNP49327 2511 aaKnown RBP4.42□□□□□ -1.7
SCN2A-202ENST00000375427 WISP3O95389 354 aaPredicted RBP4.42□□□□□ -1.7
SCN2A-202ENST00000375427 CHD8Q9HCK8 2581 aa4.42□□□□□ -1.7
SCN2A-202ENST00000375427 FSHBP01225 129 aa4.42□□□□□ -1.7
SCN2A-202ENST00000375427 ZNF80P51504 273 aaPredicted RBP4.42□□□□□ -1.7
SCN2A-202ENST00000375427 DEFB116Q30KQ4 102 aa4.42□□□□□ -1.7
SCN2A-202ENST00000375427 MLANAQ16655 118 aa4.41□□□□□ -1.7
SCN2A-202ENST00000375427 DEFB136Q30KP8 78 aa4.41□□□□□ -1.7
SCN2A-202ENST00000375427 B3GALT5-AS1P59052 145 aa4.41□□□□□ -1.7
SCN2A-202ENST00000375427 UNQ9165/PRO28630Q6UXU0 137 aa4.41□□□□□ -1.7
SCN2A-202ENST00000375427 Q6ZSR3 168 aa4.41□□□□□ -1.7
SCN2A-202ENST00000375427 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
SCN2A-202ENST00000375427 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
SCN2A-202ENST00000375427 CHTF8P0CG12 524 aa4.4□□□□□ -1.7
SCN2A-202ENST00000375427 E9PLN8 166 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 BAHCC1Q9P281 2608 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 RPL37AP8A6NKH3 93 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 LYNX1G3V0Z9 82 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 G3V318 75 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 LYNX1P0DP58 116 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 DEFB113Q30KQ7 82 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
SCN2A-202ENST00000375427 NUPR1O60356 82 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 PRO3102Q9H379 93 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 ZNRD1Q9P1U0 126 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 LDLRAD1Q5T700 205 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 SLURP2P0DP57 97 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 EPOPA6NHQ4 379 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 Q8NBF4 154 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 LY75O60449 1722 aa4.39□□□□□ -1.71
SCN2A-202ENST00000375427 IGLV3-12A0A075B6K2 115 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
SCN2A-202ENST00000375427 SMIM29Q86T20 159 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 ODF3Q96PU9 254 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 A0A087WSZ3 146 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 C11orf1Q9H5F2 150 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 FAM167A-AS1Q96KT0 104 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 AHDC1Q5TGY3 1603 aaPredicted RBP4.38□□□□□ -1.71
SCN2A-202ENST00000375427 DEFB135Q30KP9 77 aa4.38□□□□□ -1.71
SCN2A-202ENST00000375427 WT1-ASQ06250 92 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 A8MUN3 132 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 U3KQK5 164 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 PAPPA2Q9BXP8 1791 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 MYCNOSP40205 109 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 MSRB1Q9NZV6 116 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 SMAD5-AS1Q9Y6J3 95 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 Q6ZQT0 140 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 IGLV6-57P01721 117 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 DEFB132Q7Z7B7 95 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 COA5Q86WW8 74 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 THSD7AQ9UPZ6 1657 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 BPESC1Q9GZL8 116 aa4.37□□□□□ -1.71
SCN2A-202ENST00000375427 C2orf91Q6ZV80 131 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms