RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CHD7Q9P2D1 2997 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 CSDC2Q9Y534 153 aaKnown RBP12.54□□□□□ -0.4
PTPRU-202ENST00000373779 HIVEP2P31629 2446 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 COX7CP15954 63 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 RPL28P46779 137 aaKnown RBP12.54□□□□□ -0.4
PTPRU-202ENST00000373779 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 USP17L23D6RBM5 183 aa12.54□□□□□ -0.4
PTPRU-202ENST00000373779 SMCPP49901 116 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-202ENST00000373779 C1orf158Q8N1D5 194 aa12.53□□□□□ -0.4
PTPRU-202ENST00000373779 HTTP42858 3142 aa12.52□□□□□ -0.4
PTPRU-202ENST00000373779 Q8IZM0 81 aa12.52□□□□□ -0.4
PTPRU-202ENST00000373779 C5orf42Q9H799 3197 aa12.52□□□□□ -0.41
PTPRU-202ENST00000373779 NCOR2Q9Y618 2525 aa12.52□□□□□ -0.41
PTPRU-202ENST00000373779 XAGE1AQ9HD64 81 aa12.52□□□□□ -0.41
PTPRU-202ENST00000373779 Q6JHZ5 121 aa12.51□□□□□ -0.41
PTPRU-202ENST00000373779 COX17Q14061 63 aa12.5□□□□□ -0.41
PTPRU-202ENST00000373779 COL27A1Q8IZC6 1860 aaPredicted RBP12.49□□□□□ -0.41
PTPRU-202ENST00000373779 MIFP14174 115 aa12.49□□□□□ -0.41
PTPRU-202ENST00000373779 FAM236DA0A1B0GTK5 79 aa12.49□□□□□ -0.41
PTPRU-202ENST00000373779 FAM236CP0DP71 79 aa12.49□□□□□ -0.41
PTPRU-202ENST00000373779 BPY2O14599 106 aa12.48□□□□□ -0.41
PTPRU-202ENST00000373779 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
PTPRU-202ENST00000373779 A0A087WZ39 114 aa12.48□□□□□ -0.41
PTPRU-202ENST00000373779 Q6ZQY7 126 aa12.47□□□□□ -0.41
PTPRU-202ENST00000373779 IGLV4-60A0A075B6I1 120 aa12.47□□□□□ -0.41
PTPRU-202ENST00000373779 A0A087WYN8 130 aa12.47□□□□□ -0.41
PTPRU-202ENST00000373779 LINC00526Q96FQ7 95 aa12.46□□□□□ -0.41
PTPRU-202ENST00000373779 FAM110AQ9BQ89 295 aa12.46□□□□□ -0.41
PTPRU-202ENST00000373779 ZNF843Q8N446 348 aa12.46□□□□□ -0.41
PTPRU-202ENST00000373779 CCKP06307 115 aa12.45□□□□□ -0.42
PTPRU-202ENST00000373779 CEP295Q9C0D2 2601 aa12.44□□□□□ -0.42
PTPRU-202ENST00000373779 NDUFC2O95298 119 aa12.44□□□□□ -0.42
PTPRU-202ENST00000373779 MP68P56378 58 aa12.44□□□□□ -0.42
PTPRU-202ENST00000373779 KLK9Q2XQG4 91 aa12.44□□□□□ -0.42
PTPRU-202ENST00000373779 MYO9AB2RTY4 2548 aa12.43□□□□□ -0.42
PTPRU-202ENST00000373779 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
PTPRU-202ENST00000373779 LELP1Q5T871 98 aa12.43□□□□□ -0.42
PTPRU-202ENST00000373779 FHL2Q14192 279 aa12.42□□□□□ -0.42
PTPRU-202ENST00000373779 C11orf72Q8NBR9 251 aa12.42□□□□□ -0.42
PTPRU-202ENST00000373779 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
PTPRU-202ENST00000373779 IGLV5-39A0A0G2JS06 123 aa12.41□□□□□ -0.42
PTPRU-202ENST00000373779 Q8N814 137 aa12.41□□□□□ -0.42
PTPRU-202ENST00000373779 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
PTPRU-202ENST00000373779 MUC7Q8TAX7 377 aa12.4□□□□□ -0.42
PTPRU-202ENST00000373779 KRTAP10-9P60411 292 aa12.4□□□□□ -0.42
PTPRU-202ENST00000373779 C11orf45Q8TAV5 145 aa12.4□□□□□ -0.42
PTPRU-202ENST00000373779 HIVEP3Q5T1R4 2406 aa12.4□□□□□ -0.42
PTPRU-202ENST00000373779 PKIGQ9Y2B9 76 aa12.4□□□□□ -0.43
PTPRU-202ENST00000373779 HILS1P60008 231 aa12.39□□□□□ -0.43
PTPRU-202ENST00000373779 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
PTPRU-202ENST00000373779 CCDC168Q8NDH2 2452 aa12.39□□□□□ -0.43
PTPRU-202ENST00000373779 KIR2DL5BQ8NHK3 375 aa12.39□□□□□ -0.43
PTPRU-202ENST00000373779 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
PTPRU-202ENST00000373779 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
PTPRU-202ENST00000373779 A0A087WVE0 104 aa12.37□□□□□ -0.43
PTPRU-202ENST00000373779 M0R378 163 aa12.37□□□□□ -0.43
PTPRU-202ENST00000373779 NDUFS5O43920 106 aa12.37□□□□□ -0.43
PTPRU-202ENST00000373779 CYSRT1A8MQ03 144 aa12.37□□□□□ -0.43
PTPRU-202ENST00000373779 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
PTPRU-202ENST00000373779 TRBV7-7A0A0K0K1E9 115 aa12.37□□□□□ -0.43
PTPRU-202ENST00000373779 ZNF73O43830 326 aaPredicted RBP12.37□□□□□ -0.43
PTPRU-202ENST00000373779 KLK5Q9Y337 293 aaPredicted RBP12.37□□□□□ -0.43
PTPRU-202ENST00000373779 SYCNQ0VAF6 134 aa12.36□□□□□ -0.43
PTPRU-202ENST00000373779 C5orf47Q569G3 176 aa12.36□□□□□ -0.43
PTPRU-202ENST00000373779 C9orf116Q5BN46 136 aaPredicted RBP12.36□□□□□ -0.43
PTPRU-202ENST00000373779 PRB2P02812 416 aaPredicted RBP12.36□□□□□ -0.43
PTPRU-202ENST00000373779 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
PTPRU-202ENST00000373779 NTM-AS1Q6ZSK4 140 aa12.36□□□□□ -0.43
PTPRU-202ENST00000373779 DEFB131BA0A096LNP1 70 aa12.35□□□□□ -0.43
PTPRU-202ENST00000373779 UNQ6190/PRO20217Q6UXQ8 127 aa12.35□□□□□ -0.43
PTPRU-202ENST00000373779 INAFM1C9JVW0 142 aa12.35□□□□□ -0.43
PTPRU-202ENST00000373779 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
PTPRU-202ENST00000373779 UBE2AP49459 152 aa12.35□□□□□ -0.43
PTPRU-202ENST00000373779 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.35□□□□□ -0.43
PTPRU-202ENST00000373779 NDUFB1O75438 58 aa12.35□□□□□ -0.43
PTPRU-202ENST00000373779 SNURFQ9Y675 71 aa12.34□□□□□ -0.43
PTPRU-202ENST00000373779 IGLV5-45A0A087WSX0 123 aa12.34□□□□□ -0.43
PTPRU-202ENST00000373779 C3orf84H3BNL1 204 aa12.33□□□□□ -0.44
PTPRU-202ENST00000373779 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
PTPRU-202ENST00000373779 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
PTPRU-202ENST00000373779 IGKV2-28A0A075B6P5 120 aa12.32□□□□□ -0.44
PTPRU-202ENST00000373779 IGKV2D-28P01615 120 aa12.32□□□□□ -0.44
PTPRU-202ENST00000373779 Q8N2B8 174 aa12.32□□□□□ -0.44
PTPRU-202ENST00000373779 NDUFC1O43677 76 aa12.31□□□□□ -0.44
PTPRU-202ENST00000373779 Q9UF83 564 aa12.31□□□□□ -0.44
PTPRU-202ENST00000373779 PRRC2CQ9Y520 2896 aaKnown RBP12.31□□□□□ -0.44
PTPRU-202ENST00000373779 A0A1B0GUV1 79 aa12.31□□□□□ -0.44
PTPRU-202ENST00000373779 IGKV2-24A0A0C4DH68 120 aa12.3□□□□□ -0.44
PTPRU-202ENST00000373779 BRK1Q8WUW1 75 aa12.29□□□□□ -0.44
PTPRU-202ENST00000373779 LINC00846Q9NV44 126 aa12.29□□□□□ -0.44
PTPRU-202ENST00000373779 HIGD2AQ9BW72 106 aa12.29□□□□□ -0.44
PTPRU-202ENST00000373779 A0A0C4DFX4 3053 aa12.29□□□□□ -0.44
PTPRU-202ENST00000373779 LY6G6DO95868 133 aa12.29□□□□□ -0.44
PTPRU-202ENST00000373779 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
PTPRU-202ENST00000373779 PLA2G2AP14555 144 aa12.28□□□□□ -0.44
PTPRU-202ENST00000373779 ATP5EP56381 51 aaPredicted RBP12.28□□□□□ -0.44
PTPRU-202ENST00000373779 NDUFC2-KCTD14E9PQ53 114 aa12.28□□□□□ -0.44
PTPRU-202ENST00000373779 C16orf95Q9H693 158 aa12.28□□□□□ -0.44
PTPRU-202ENST00000373779 PIEZO1Q92508 2521 aa12.28□□□□□ -0.44
PTPRU-202ENST00000373779 FAM19A5Q7Z5A7 132 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms